Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AL360271.1-201ENST00000395679 510 ntBASIC9.7□□□□□ -0.86
TOP2AP11388 AL596266.1-201ENST00000448132 400 ntBASIC9.7□□□□□ -0.86
TOP2AP11388 PMS2P3-207ENST00000529061 717 ntBASIC9.7□□□□□ -0.86
TOP2AP11388 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC9.7□□□□□ -0.86
TOP2AP11388 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
TOP2AP11388 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
TOP2AP11388 FAM199X-202ENST00000493442 7457 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
TOP2AP11388 RAB21-201ENST00000261263 15546 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
TOP2AP11388 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
TOP2AP11388 NUP107-201ENST00000229179 6457 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
TOP2AP11388 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
TOP2AP11388 KPNA1-201ENST00000344337 6830 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
TOP2AP11388 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
TOP2AP11388 RNU4-4P-201ENST00000364588 130 ntBASIC9.69□□□□□ -0.86
TOP2AP11388 SNORA70H-201ENST00000383910 135 ntBASIC9.69□□□□□ -0.86
TOP2AP11388 SNORA70J-201ENST00000384182 135 ntBASIC9.69□□□□□ -0.86
TOP2AP11388 RPL37P18-201ENST00000411602 243 ntBASIC9.69□□□□□ -0.86
TOP2AP11388 GAPDHP25-201ENST00000447061 1001 ntBASIC9.69□□□□□ -0.86
TOP2AP11388 AC079080.1-201ENST00000479841 822 ntBASIC9.69□□□□□ -0.86
TOP2AP11388 MTND6P2-201ENST00000512226 524 ntBASIC9.69□□□□□ -0.86
TOP2AP11388 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC9.69□□□□□ -0.86
TOP2AP11388 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC9.69□□□□□ -0.86
TOP2AP11388 UBA3-213ENST00000631029 123 ntTSL 5 BASIC9.69□□□□□ -0.86
TOP2AP11388 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC9.69□□□□□ -0.86
TOP2AP11388 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
TOP2AP11388 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
TOP2AP11388 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
TOP2AP11388 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
TOP2AP11388 PLEKHG4B-204ENST00000637938 12612 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
TOP2AP11388 EXOC5-211ENST00000621441 10589 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
TOP2AP11388 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
TOP2AP11388 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC9.68□□□□□ -0.86
TOP2AP11388 PDE4DIP-246ENST00000618462 8150 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
TOP2AP11388 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
TOP2AP11388 AC136624.1-201ENST00000400791 413 ntBASIC9.68□□□□□ -0.86
TOP2AP11388 RPS3AP38-201ENST00000435889 763 ntBASIC9.68□□□□□ -0.86
TOP2AP11388 AC083982.1-201ENST00000485679 344 ntBASIC9.68□□□□□ -0.86
TOP2AP11388 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC9.68□□□□□ -0.86
TOP2AP11388 MIR6810-201ENST00000622701 70 ntBASIC9.68□□□□□ -0.86
TOP2AP11388 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC9.68□□□□□ -0.86
TOP2AP11388 KALRN-202ENST00000291478 10888 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
TOP2AP11388 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC9.68□□□□□ -0.86
TOP2AP11388 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC9.68□□□□□ -0.86
TOP2AP11388 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
TOP2AP11388 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
TOP2AP11388 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
TOP2AP11388 KLC1-204ENST00000348520 15091 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
TOP2AP11388 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC9.68□□□□□ -0.86
TOP2AP11388 TOGARAM2-201ENST00000379558 12691 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
TOP2AP11388 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
TOP2AP11388 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC9.68□□□□□ -0.86
TOP2AP11388 IGF1R-206ENST00000558762 11726 ntAPPRIS ALT1 TSL 1 (best) BASIC9.67□□□□□ -0.86
TOP2AP11388 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC9.67□□□□□ -0.86
TOP2AP11388 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC9.67□□□□□ -0.86
TOP2AP11388 RPS17P17-201ENST00000419392 409 ntBASIC9.67□□□□□ -0.86
TOP2AP11388 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC9.67□□□□□ -0.86
TOP2AP11388 RPS3AP41-201ENST00000462701 778 ntBASIC9.67□□□□□ -0.86
TOP2AP11388 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
TOP2AP11388 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC9.67□□□□□ -0.86
TOP2AP11388 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC9.67□□□□□ -0.86
TOP2AP11388 AC008655.2-201ENST00000597049 304 ntTSL 4 BASIC9.67□□□□□ -0.86
TOP2AP11388 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
TOP2AP11388 HMGB4-204ENST00000522796 2505 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
TOP2AP11388 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC9.67□□□□□ -0.86
TOP2AP11388 SLC8A1-204ENST00000405269 2965 ntTSL 5 BASIC9.67□□□□□ -0.86
TOP2AP11388 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
TOP2AP11388 CHD8-201ENST00000399982 8229 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
TOP2AP11388 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC9.67□□□□□ -0.86
TOP2AP11388 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
TOP2AP11388 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
TOP2AP11388 AL589993.1-201ENST00000407450 2524 ntBASIC9.67□□□□□ -0.86
TOP2AP11388 PANDAR-201ENST00000629595 1506 ntBASIC9.67□□□□□ -0.86
TOP2AP11388 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
TOP2AP11388 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
TOP2AP11388 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
TOP2AP11388 SVIL-202ENST00000375398 8201 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
TOP2AP11388 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
TOP2AP11388 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
TOP2AP11388 DBIP1-201ENST00000401435 260 ntBASIC9.66□□□□□ -0.86
TOP2AP11388 AL807761.1-201ENST00000417622 171 ntBASIC9.66□□□□□ -0.86
TOP2AP11388 AL365220.1-201ENST00000432923 399 ntBASIC9.66□□□□□ -0.86
TOP2AP11388 USP24P1-201ENST00000433802 779 ntBASIC9.66□□□□□ -0.86
TOP2AP11388 RSU1P1-201ENST00000453416 441 ntBASIC9.66□□□□□ -0.86
TOP2AP11388 MEMO1P4-201ENST00000453590 386 ntBASIC9.66□□□□□ -0.86
TOP2AP11388 RPL37AP8-201ENST00000494116 276 ntBASIC9.66□□□□□ -0.86
TOP2AP11388 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC9.66□□□□□ -0.86
TOP2AP11388 RN7SKP253-201ENST00000516424 309 ntBASIC9.66□□□□□ -0.86
TOP2AP11388 AC100827.5-201ENST00000615883 426 ntBASIC9.66□□□□□ -0.86
TOP2AP11388 MT-RNR2-201ENST00000387347 1559 ntBASIC9.66□□□□□ -0.86
TOP2AP11388 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC9.66□□□□□ -0.86
TOP2AP11388 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
TOP2AP11388 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
TOP2AP11388 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
TOP2AP11388 SVEP1-202ENST00000374469 12194 ntAPPRIS P2 TSL 5 BASIC9.66□□□□□ -0.86
TOP2AP11388 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
TOP2AP11388 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
TOP2AP11388 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
TOP2AP11388 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC9.66□□□□□ -0.86
TOP2AP11388 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
TOP2AP11388 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC9.66□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms