Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 ZNF827-203ENST00000508784 7463 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
ALDH1A1P00352 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
ALDH1A1P00352 GRAMD2B-212ENST00000513040 2196 ntTSL 2 BASIC8.38□□□□□ -1.07
ALDH1A1P00352 SND1-IT1-201ENST00000623342 2481 ntBASIC8.38□□□□□ -1.07
ALDH1A1P00352 OR2T11-202ENST00000641193 3770 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
ALDH1A1P00352 CNOT6LP1-201ENST00000559681 1462 ntBASIC8.38□□□□□ -1.07
ALDH1A1P00352 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC8.38□□□□□ -1.07
ALDH1A1P00352 SLC9A6-213ENST00000637234 4691 ntTSL 5 BASIC8.38□□□□□ -1.07
ALDH1A1P00352 LIMK2-201ENST00000331728 3670 ntAPPRIS P4 TSL 1 (best) BASIC8.38□□□□□ -1.07
ALDH1A1P00352 AC020904.2-202ENST00000614660 1401 ntBASIC8.37□□□□□ -1.07
ALDH1A1P00352 CACNB2-201ENST00000282343 3524 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
ALDH1A1P00352 LPL-201ENST00000311322 3846 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
ALDH1A1P00352 GMFB-209ENST00000616146 4125 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
ALDH1A1P00352 R3HDM2P1-201ENST00000505381 1960 ntBASIC8.37□□□□□ -1.07
ALDH1A1P00352 GCNT3-201ENST00000396065 4933 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
ALDH1A1P00352 IKZF3-203ENST00000346872 9667 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
ALDH1A1P00352 TMEM144-216ENST00000514558 3699 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
ALDH1A1P00352 CTNND1-231ENST00000532463 5749 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
ALDH1A1P00352 ZNF385B-202ENST00000409343 2750 ntTSL 2 BASIC8.37□□□□□ -1.07
ALDH1A1P00352 AL359263.1-201ENST00000441188 2796 ntBASIC8.37□□□□□ -1.07
ALDH1A1P00352 ACTR6-202ENST00000546902 1877 ntTSL 2 BASIC8.37□□□□□ -1.07
ALDH1A1P00352 YES1-201ENST00000314574 4441 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
ALDH1A1P00352 TACC2-226ENST00000513429 4114 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
ALDH1A1P00352 Y_RNA.356-201ENST00000365475 113 ntBASIC8.37□□□□□ -1.07
ALDH1A1P00352 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC8.37□□□□□ -1.07
ALDH1A1P00352 RNA5SP176-201ENST00000390956 110 ntBASIC8.37□□□□□ -1.07
ALDH1A1P00352 AL035419.1-201ENST00000397037 564 ntBASIC8.37□□□□□ -1.07
ALDH1A1P00352 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
ALDH1A1P00352 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC8.37□□□□□ -1.07
ALDH1A1P00352 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC8.37□□□□□ -1.07
ALDH1A1P00352 AC008072.1-201ENST00000434254 824 ntBASIC8.37□□□□□ -1.07
ALDH1A1P00352 BACH1-IT2-201ENST00000436529 806 ntTSL 5 BASIC8.37□□□□□ -1.07
ALDH1A1P00352 RPL7P36-201ENST00000444633 681 ntBASIC8.37□□□□□ -1.07
ALDH1A1P00352 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC8.37□□□□□ -1.07
ALDH1A1P00352 ATP5A1P7-201ENST00000453978 1279 ntBASIC8.37□□□□□ -1.07
ALDH1A1P00352 GTF2IP12-201ENST00000456547 356 ntBASIC8.37□□□□□ -1.07
ALDH1A1P00352 AC013267.1-201ENST00000458227 267 ntBASIC8.37□□□□□ -1.07
ALDH1A1P00352 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC8.37□□□□□ -1.07
ALDH1A1P00352 AC147055.4-201ENST00000504399 745 ntBASIC8.37□□□□□ -1.07
ALDH1A1P00352 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC8.37□□□□□ -1.07
ALDH1A1P00352 Y_RNA.675-201ENST00000516389 149 ntBASIC8.37□□□□□ -1.07
ALDH1A1P00352 RN7SKP2-201ENST00000517003 319 ntBASIC8.37□□□□□ -1.07
ALDH1A1P00352 CASC11-203ENST00000519071 791 ntTSL 3 BASIC8.37□□□□□ -1.07
ALDH1A1P00352 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC8.37□□□□□ -1.07
ALDH1A1P00352 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC8.37□□□□□ -1.07
ALDH1A1P00352 AC026470.2-201ENST00000561492 181 ntBASIC8.37□□□□□ -1.07
ALDH1A1P00352 AC026458.1-201ENST00000564330 438 ntBASIC8.37□□□□□ -1.07
ALDH1A1P00352 AC007151.1-201ENST00000572774 483 ntBASIC8.37□□□□□ -1.07
ALDH1A1P00352 AP000894.4-201ENST00000610185 483 ntBASIC8.37□□□□□ -1.07
ALDH1A1P00352 AL365204.3-201ENST00000612448 685 ntBASIC8.37□□□□□ -1.07
ALDH1A1P00352 AC008121.3-201ENST00000618726 433 ntBASIC8.37□□□□□ -1.07
ALDH1A1P00352 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
ALDH1A1P00352 ATP2B1-204ENST00000428670 7032 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
ALDH1A1P00352 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC8.37□□□□□ -1.07
ALDH1A1P00352 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
ALDH1A1P00352 KRT23-202ENST00000436344 1485 ntTSL 2 BASIC8.37□□□□□ -1.07
ALDH1A1P00352 LSM5-208ENST00000450169 2258 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
ALDH1A1P00352 GJB7-203ENST00000525899 2281 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
ALDH1A1P00352 CDY2B-201ENST00000382867 1961 ntAPPRIS ALT1 BASIC8.37□□□□□ -1.07
ALDH1A1P00352 DTNA-205ENST00000399113 2232 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
ALDH1A1P00352 RSRC2-201ENST00000331738 3520 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
ALDH1A1P00352 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
ALDH1A1P00352 PIWIL3-204ENST00000533313 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
ALDH1A1P00352 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
ALDH1A1P00352 ZNF383-208ENST00000590503 1673 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
ALDH1A1P00352 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
ALDH1A1P00352 TNIK-210ENST00000470834 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
ALDH1A1P00352 TBC1D5-209ENST00000429383 3156 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
ALDH1A1P00352 CLK1-201ENST00000321356 1888 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
ALDH1A1P00352 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC8.36□□□□□ -1.07
ALDH1A1P00352 CCRL2-204ENST00000400882 1642 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
ALDH1A1P00352 NCAPH-202ENST00000427946 2363 ntTSL 2 BASIC8.36□□□□□ -1.07
ALDH1A1P00352 AL359924.1-201ENST00000450451 3127 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
ALDH1A1P00352 TMEM169-201ENST00000295658 3342 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
ALDH1A1P00352 MAPK10-228ENST00000512689 2583 ntTSL 5 BASIC8.36□□□□□ -1.07
ALDH1A1P00352 MAPK10-319ENST00000641459 2542 ntBASIC8.36□□□□□ -1.07
ALDH1A1P00352 LINC00410-201ENST00000419272 2018 ntTSL 2 BASIC8.36□□□□□ -1.07
ALDH1A1P00352 DAPP1-201ENST00000296414 2955 ntAPPRIS ALT1 TSL 1 (best) BASIC8.36□□□□□ -1.07
ALDH1A1P00352 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC8.36□□□□□ -1.07
ALDH1A1P00352 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
ALDH1A1P00352 MAPK10-329ENST00000641555 2656 ntBASIC8.36□□□□□ -1.07
ALDH1A1P00352 ZNF10-202ENST00000402932 1967 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
ALDH1A1P00352 AC010894.1-201ENST00000313760 361 ntBASIC8.36□□□□□ -1.07
ALDH1A1P00352 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
ALDH1A1P00352 RNU1-5P-201ENST00000362684 144 ntBASIC8.36□□□□□ -1.07
ALDH1A1P00352 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
ALDH1A1P00352 CCNG1P1-201ENST00000406783 885 ntBASIC8.36□□□□□ -1.07
ALDH1A1P00352 RPSAP40-201ENST00000442343 891 ntBASIC8.36□□□□□ -1.07
ALDH1A1P00352 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC8.36□□□□□ -1.07
ALDH1A1P00352 RPL35AP19-201ENST00000469425 329 ntBASIC8.36□□□□□ -1.07
ALDH1A1P00352 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC8.36□□□□□ -1.07
ALDH1A1P00352 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC8.36□□□□□ -1.07
ALDH1A1P00352 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC8.36□□□□□ -1.07
ALDH1A1P00352 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC8.36□□□□□ -1.07
ALDH1A1P00352 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
ALDH1A1P00352 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC8.36□□□□□ -1.07
ALDH1A1P00352 AC025524.2-202ENST00000523042 535 ntTSL 4 BASIC8.36□□□□□ -1.07
ALDH1A1P00352 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC8.36□□□□□ -1.07
ALDH1A1P00352 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC8.36□□□□□ -1.07
ALDH1A1P00352 PSMA3P-201ENST00000555485 635 ntBASIC8.36□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms