Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC7.1□□□□□ -1.27
COL4A3BPQ9Y5P4 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC7.1□□□□□ -1.27
COL4A3BPQ9Y5P4 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC7.1□□□□□ -1.27
COL4A3BPQ9Y5P4 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
COL4A3BPQ9Y5P4 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC7.1□□□□□ -1.27
COL4A3BPQ9Y5P4 HMGB1P5-202ENST00000451497 985 ntBASIC7.1□□□□□ -1.27
COL4A3BPQ9Y5P4 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC7.1□□□□□ -1.27
COL4A3BPQ9Y5P4 AC117394.1-201ENST00000477323 567 ntBASIC7.1□□□□□ -1.27
COL4A3BPQ9Y5P4 AC107398.1-201ENST00000486904 505 ntBASIC7.1□□□□□ -1.27
COL4A3BPQ9Y5P4 RPL37P23-201ENST00000492641 294 ntBASIC7.1□□□□□ -1.27
COL4A3BPQ9Y5P4 CDH12P2-201ENST00000504393 298 ntBASIC7.1□□□□□ -1.27
COL4A3BPQ9Y5P4 NAMPTP2-201ENST00000505629 1115 ntBASIC7.1□□□□□ -1.27
COL4A3BPQ9Y5P4 COX6B1P4-201ENST00000519826 484 ntBASIC7.1□□□□□ -1.27
COL4A3BPQ9Y5P4 AP005639.1-201ENST00000526939 192 ntBASIC7.1□□□□□ -1.27
COL4A3BPQ9Y5P4 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC7.1□□□□□ -1.27
COL4A3BPQ9Y5P4 CD69-203ENST00000536709 1020 ntTSL 2 BASIC7.1□□□□□ -1.27
COL4A3BPQ9Y5P4 FCF1-203ENST00000553615 954 ntTSL 3 BASIC7.1□□□□□ -1.27
COL4A3BPQ9Y5P4 AL121579.2-201ENST00000555466 590 ntBASIC7.1□□□□□ -1.27
COL4A3BPQ9Y5P4 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC7.1□□□□□ -1.27
COL4A3BPQ9Y5P4 MIR4271-201ENST00000582451 67 ntBASIC7.1□□□□□ -1.27
COL4A3BPQ9Y5P4 RN7SL475P-201ENST00000583379 298 ntBASIC7.1□□□□□ -1.27
COL4A3BPQ9Y5P4 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC7.1□□□□□ -1.27
COL4A3BPQ9Y5P4 AF129408.1-201ENST00000608767 431 ntBASIC7.1□□□□□ -1.27
COL4A3BPQ9Y5P4 AP005229.2-201ENST00000609980 697 ntBASIC7.1□□□□□ -1.27
COL4A3BPQ9Y5P4 IMMTP1-201ENST00000435590 2219 ntBASIC7.1□□□□□ -1.27
COL4A3BPQ9Y5P4 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
COL4A3BPQ9Y5P4 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
COL4A3BPQ9Y5P4 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
COL4A3BPQ9Y5P4 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC7.1□□□□□ -1.27
COL4A3BPQ9Y5P4 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
COL4A3BPQ9Y5P4 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
COL4A3BPQ9Y5P4 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
COL4A3BPQ9Y5P4 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC7.1□□□□□ -1.27
COL4A3BPQ9Y5P4 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
COL4A3BPQ9Y5P4 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
COL4A3BPQ9Y5P4 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC7.1□□□□□ -1.27
COL4A3BPQ9Y5P4 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
COL4A3BPQ9Y5P4 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
COL4A3BPQ9Y5P4 ING3-204ENST00000431467 1447 ntTSL 2 BASIC7.1□□□□□ -1.27
COL4A3BPQ9Y5P4 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC7.1□□□□□ -1.27
COL4A3BPQ9Y5P4 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
COL4A3BPQ9Y5P4 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
COL4A3BPQ9Y5P4 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC7.09□□□□□ -1.27
COL4A3BPQ9Y5P4 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC7.09□□□□□ -1.27
COL4A3BPQ9Y5P4 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
COL4A3BPQ9Y5P4 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
COL4A3BPQ9Y5P4 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC7.09□□□□□ -1.27
COL4A3BPQ9Y5P4 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC7.09□□□□□ -1.27
COL4A3BPQ9Y5P4 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
COL4A3BPQ9Y5P4 YWHAZP6-201ENST00000399764 738 ntBASIC7.09□□□□□ -1.27
COL4A3BPQ9Y5P4 VN1R12P-201ENST00000403778 876 ntBASIC7.09□□□□□ -1.27
COL4A3BPQ9Y5P4 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC7.09□□□□□ -1.27
COL4A3BPQ9Y5P4 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
COL4A3BPQ9Y5P4 BX664727.1-201ENST00000416024 466 ntBASIC7.09□□□□□ -1.27
COL4A3BPQ9Y5P4 VN1R37P-201ENST00000419096 748 ntBASIC7.09□□□□□ -1.27
COL4A3BPQ9Y5P4 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC7.09□□□□□ -1.27
COL4A3BPQ9Y5P4 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC7.09□□□□□ -1.27
COL4A3BPQ9Y5P4 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC7.09□□□□□ -1.27
COL4A3BPQ9Y5P4 GAPDHP34-201ENST00000432112 823 ntBASIC7.09□□□□□ -1.27
COL4A3BPQ9Y5P4 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC7.09□□□□□ -1.27
COL4A3BPQ9Y5P4 AC021006.1-201ENST00000489849 553 ntBASIC7.09□□□□□ -1.27
COL4A3BPQ9Y5P4 CIR1P1-201ENST00000524055 1133 ntBASIC7.09□□□□□ -1.27
COL4A3BPQ9Y5P4 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC7.09□□□□□ -1.27
COL4A3BPQ9Y5P4 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC7.09□□□□□ -1.27
COL4A3BPQ9Y5P4 GLRXP2-201ENST00000555594 321 ntBASIC7.09□□□□□ -1.27
COL4A3BPQ9Y5P4 AC104229.1-201ENST00000561364 255 ntBASIC7.09□□□□□ -1.27
COL4A3BPQ9Y5P4 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC7.09□□□□□ -1.27
COL4A3BPQ9Y5P4 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC7.09□□□□□ -1.27
COL4A3BPQ9Y5P4 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
COL4A3BPQ9Y5P4 SMIM12P1-201ENST00000603004 274 ntBASIC7.09□□□□□ -1.27
COL4A3BPQ9Y5P4 AC012557.1-201ENST00000607115 611 ntBASIC7.09□□□□□ -1.27
COL4A3BPQ9Y5P4 AP000864.1-201ENST00000609424 650 ntBASIC7.09□□□□□ -1.27
COL4A3BPQ9Y5P4 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC7.09□□□□□ -1.27
COL4A3BPQ9Y5P4 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC7.09□□□□□ -1.27
COL4A3BPQ9Y5P4 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC7.09□□□□□ -1.27
COL4A3BPQ9Y5P4 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
COL4A3BPQ9Y5P4 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC7.09□□□□□ -1.27
COL4A3BPQ9Y5P4 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
COL4A3BPQ9Y5P4 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
COL4A3BPQ9Y5P4 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
COL4A3BPQ9Y5P4 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
COL4A3BPQ9Y5P4 AP003486.1-201ENST00000525716 3994 ntBASIC7.09□□□□□ -1.28
COL4A3BPQ9Y5P4 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
COL4A3BPQ9Y5P4 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
COL4A3BPQ9Y5P4 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC7.09□□□□□ -1.28
COL4A3BPQ9Y5P4 AC119674.1-213ENST00000641177 1386 ntBASIC7.08□□□□□ -1.28
COL4A3BPQ9Y5P4 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
COL4A3BPQ9Y5P4 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
COL4A3BPQ9Y5P4 DMD-205ENST00000359836 7339 ntTSL 5 BASIC7.08□□□□□ -1.28
COL4A3BPQ9Y5P4 CUBNP3-201ENST00000457461 1784 ntBASIC7.08□□□□□ -1.28
COL4A3BPQ9Y5P4 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC7.08□□□□□ -1.28
COL4A3BPQ9Y5P4 AC022507.1-201ENST00000548349 1505 ntBASIC7.08□□□□□ -1.28
COL4A3BPQ9Y5P4 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
COL4A3BPQ9Y5P4 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC7.08□□□□□ -1.28
COL4A3BPQ9Y5P4 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
COL4A3BPQ9Y5P4 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
COL4A3BPQ9Y5P4 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
COL4A3BPQ9Y5P4 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
COL4A3BPQ9Y5P4 RNA5SP478-201ENST00000364657 115 ntBASIC7.08□□□□□ -1.28
COL4A3BPQ9Y5P4 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC7.08□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms