Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 PSMD10P2-201ENST00000432890 672 ntBASIC4.85□□□□□ -1.63
CCDC71LQ8N9Z2 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC4.85□□□□□ -1.63
CCDC71LQ8N9Z2 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC71LQ8N9Z2 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC4.85□□□□□ -1.63
CCDC71LQ8N9Z2 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC4.85□□□□□ -1.63
CCDC71LQ8N9Z2 EIF3LP2-201ENST00000457262 807 ntBASIC4.85□□□□□ -1.63
CCDC71LQ8N9Z2 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC4.85□□□□□ -1.63
CCDC71LQ8N9Z2 RN7SL83P-201ENST00000468131 297 ntBASIC4.85□□□□□ -1.63
CCDC71LQ8N9Z2 RPL5P22-201ENST00000480199 884 ntBASIC4.85□□□□□ -1.63
CCDC71LQ8N9Z2 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC4.85□□□□□ -1.63
CCDC71LQ8N9Z2 AL671862.1-201ENST00000515851 349 ntBASIC4.85□□□□□ -1.63
CCDC71LQ8N9Z2 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC4.85□□□□□ -1.63
CCDC71LQ8N9Z2 VDAC3-206ENST00000521158 949 ntAPPRIS ALT1 TSL 5 BASIC4.85□□□□□ -1.63
CCDC71LQ8N9Z2 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC4.85□□□□□ -1.63
CCDC71LQ8N9Z2 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC4.85□□□□□ -1.63
CCDC71LQ8N9Z2 AC025283.1-201ENST00000572039 734 ntBASIC4.85□□□□□ -1.63
CCDC71LQ8N9Z2 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC4.85□□□□□ -1.63
CCDC71LQ8N9Z2 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC71LQ8N9Z2 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC4.85□□□□□ -1.63
CCDC71LQ8N9Z2 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC4.85□□□□□ -1.63
CCDC71LQ8N9Z2 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC4.85□□□□□ -1.63
CCDC71LQ8N9Z2 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC4.85□□□□□ -1.63
CCDC71LQ8N9Z2 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC4.85□□□□□ -1.63
CCDC71LQ8N9Z2 MIR6133-201ENST00000617057 108 ntBASIC4.85□□□□□ -1.63
CCDC71LQ8N9Z2 AC006840.1-201ENST00000623069 542 ntBASIC4.85□□□□□ -1.63
CCDC71LQ8N9Z2 CLUHP10-201ENST00000631979 980 ntBASIC4.85□□□□□ -1.63
CCDC71LQ8N9Z2 EIF3EP1-201ENST00000433978 1316 ntBASIC4.85□□□□□ -1.63
CCDC71LQ8N9Z2 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC4.85□□□□□ -1.63
CCDC71LQ8N9Z2 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC71LQ8N9Z2 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC71LQ8N9Z2 CPS1-IT1-201ENST00000628368 2306 ntBASIC4.85□□□□□ -1.63
CCDC71LQ8N9Z2 NAMPTP1-201ENST00000440465 2514 ntBASIC4.85□□□□□ -1.63
CCDC71LQ8N9Z2 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC4.85□□□□□ -1.63
CCDC71LQ8N9Z2 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC4.85□□□□□ -1.63
CCDC71LQ8N9Z2 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC71LQ8N9Z2 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
CCDC71LQ8N9Z2 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC71LQ8N9Z2 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC71LQ8N9Z2 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC4.84□□□□□ -1.63
CCDC71LQ8N9Z2 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC71LQ8N9Z2 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC71LQ8N9Z2 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
CCDC71LQ8N9Z2 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC71LQ8N9Z2 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC71LQ8N9Z2 RN7SKP78-201ENST00000364711 318 ntBASIC4.84□□□□□ -1.63
CCDC71LQ8N9Z2 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC4.84□□□□□ -1.63
CCDC71LQ8N9Z2 RNA5SP187-201ENST00000384400 119 ntBASIC4.84□□□□□ -1.63
CCDC71LQ8N9Z2 IGKV6D-41-201ENST00000390271 371 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
CCDC71LQ8N9Z2 YWHAZP4-201ENST00000392459 708 ntBASIC4.84□□□□□ -1.63
CCDC71LQ8N9Z2 AL132875.1-201ENST00000403623 949 ntBASIC4.84□□□□□ -1.63
CCDC71LQ8N9Z2 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC4.84□□□□□ -1.63
CCDC71LQ8N9Z2 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC4.84□□□□□ -1.63
CCDC71LQ8N9Z2 MTND2P12-201ENST00000417560 1252 ntBASIC4.84□□□□□ -1.63
CCDC71LQ8N9Z2 AL121878.1-201ENST00000418638 859 ntBASIC4.84□□□□□ -1.63
CCDC71LQ8N9Z2 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC4.84□□□□□ -1.63
CCDC71LQ8N9Z2 RPSAP65-201ENST00000429660 595 ntBASIC4.84□□□□□ -1.63
CCDC71LQ8N9Z2 OR6R1P-201ENST00000431838 940 ntBASIC4.84□□□□□ -1.63
CCDC71LQ8N9Z2 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
CCDC71LQ8N9Z2 SLC25A24P1-202ENST00000434803 1220 ntBASIC4.84□□□□□ -1.63
CCDC71LQ8N9Z2 AC234771.4-201ENST00000441416 730 ntBASIC4.84□□□□□ -1.63
CCDC71LQ8N9Z2 SEPT14P12-201ENST00000442280 560 ntBASIC4.84□□□□□ -1.63
CCDC71LQ8N9Z2 TRIM60P16-201ENST00000444048 694 ntBASIC4.84□□□□□ -1.63
CCDC71LQ8N9Z2 CBX1P2-201ENST00000453841 458 ntBASIC4.84□□□□□ -1.63
CCDC71LQ8N9Z2 RPL5P16-201ENST00000471467 790 ntBASIC4.84□□□□□ -1.63
CCDC71LQ8N9Z2 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC4.84□□□□□ -1.63
CCDC71LQ8N9Z2 DEFB109A-201ENST00000482450 265 ntBASIC4.84□□□□□ -1.63
CCDC71LQ8N9Z2 DUBR-205ENST00000495228 411 ntTSL 2 BASIC4.84□□□□□ -1.63
CCDC71LQ8N9Z2 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC4.84□□□□□ -1.63
CCDC71LQ8N9Z2 AC095052.1-201ENST00000509955 863 ntBASIC4.84□□□□□ -1.63
CCDC71LQ8N9Z2 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC4.84□□□□□ -1.63
CCDC71LQ8N9Z2 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC4.84□□□□□ -1.63
CCDC71LQ8N9Z2 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC4.84□□□□□ -1.63
CCDC71LQ8N9Z2 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC4.84□□□□□ -1.63
CCDC71LQ8N9Z2 AC068408.1-201ENST00000577406 1144 ntBASIC4.84□□□□□ -1.63
CCDC71LQ8N9Z2 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC4.84□□□□□ -1.63
CCDC71LQ8N9Z2 AC036176.3-201ENST00000602456 418 ntBASIC4.84□□□□□ -1.63
CCDC71LQ8N9Z2 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC4.84□□□□□ -1.63
CCDC71LQ8N9Z2 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC4.84□□□□□ -1.63
CCDC71LQ8N9Z2 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC71LQ8N9Z2 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC71LQ8N9Z2 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC4.84□□□□□ -1.63
CCDC71LQ8N9Z2 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
CCDC71LQ8N9Z2 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC4.84□□□□□ -1.64
CCDC71LQ8N9Z2 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
CCDC71LQ8N9Z2 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
CCDC71LQ8N9Z2 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
CCDC71LQ8N9Z2 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.64
CCDC71LQ8N9Z2 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.64
CCDC71LQ8N9Z2 ALB-214ENST00000509063 1911 ntTSL 5 BASIC4.84□□□□□ -1.64
CCDC71LQ8N9Z2 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
CCDC71LQ8N9Z2 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
CCDC71LQ8N9Z2 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.83□□□□□ -1.64
CCDC71LQ8N9Z2 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
CCDC71LQ8N9Z2 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.83□□□□□ -1.64
CCDC71LQ8N9Z2 AP004607.3-201ENST00000530354 3915 ntBASIC4.83□□□□□ -1.64
CCDC71LQ8N9Z2 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC71LQ8N9Z2 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.83□□□□□ -1.64
CCDC71LQ8N9Z2 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC71LQ8N9Z2 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC71LQ8N9Z2 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms