Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC6.69□□□□□ -1.34
CCNA1P78396 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CCNA1P78396 AL590763.1-201ENST00000398297 1545 ntBASIC6.69□□□□□ -1.34
CCNA1P78396 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC6.69□□□□□ -1.34
CCNA1P78396 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
CCNA1P78396 CCAT2-201ENST00000630920 1752 ntBASIC6.69□□□□□ -1.34
CCNA1P78396 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
CCNA1P78396 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.69□□□□□ -1.34
CCNA1P78396 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.69□□□□□ -1.34
CCNA1P78396 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.69□□□□□ -1.34
CCNA1P78396 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC6.69□□□□□ -1.34
CCNA1P78396 PABPC1P8-201ENST00000452851 2086 ntBASIC6.69□□□□□ -1.34
CCNA1P78396 LINC02019-201ENST00000608605 2060 ntBASIC6.69□□□□□ -1.34
CCNA1P78396 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CCNA1P78396 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CCNA1P78396 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CCNA1P78396 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
CCNA1P78396 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.68□□□□□ -1.34
CCNA1P78396 AL355377.1-201ENST00000621125 1653 ntBASIC6.68□□□□□ -1.34
CCNA1P78396 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.68□□□□□ -1.34
CCNA1P78396 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC6.68□□□□□ -1.34
CCNA1P78396 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.68□□□□□ -1.34
CCNA1P78396 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.68□□□□□ -1.34
CCNA1P78396 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
CCNA1P78396 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC6.68□□□□□ -1.34
CCNA1P78396 SNORA58B-201ENST00000364259 136 ntBASIC6.68□□□□□ -1.34
CCNA1P78396 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.68□□□□□ -1.34
CCNA1P78396 AC019205.1-201ENST00000421830 730 ntBASIC6.68□□□□□ -1.34
CCNA1P78396 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC6.68□□□□□ -1.34
CCNA1P78396 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6.68□□□□□ -1.34
CCNA1P78396 CUBNP2-201ENST00000443534 1139 ntBASIC6.68□□□□□ -1.34
CCNA1P78396 ACA64.4-201ENST00000459070 127 ntBASIC6.68□□□□□ -1.34
CCNA1P78396 AC087672.1-201ENST00000479876 766 ntBASIC6.68□□□□□ -1.34
CCNA1P78396 AC023818.1-201ENST00000498379 384 ntBASIC6.68□□□□□ -1.34
CCNA1P78396 AC044860.2-201ENST00000561005 179 ntBASIC6.68□□□□□ -1.34
CCNA1P78396 AC007494.1-201ENST00000562293 760 ntBASIC6.68□□□□□ -1.34
CCNA1P78396 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CCNA1P78396 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC6.68□□□□□ -1.34
CCNA1P78396 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.68□□□□□ -1.34
CCNA1P78396 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC6.68□□□□□ -1.34
CCNA1P78396 BNIP3P32-201ENST00000600015 554 ntBASIC6.68□□□□□ -1.34
CCNA1P78396 MIR6837-201ENST00000620884 64 ntBASIC6.68□□□□□ -1.34
CCNA1P78396 SAMMSON-227ENST00000642114 1199 ntBASIC6.68□□□□□ -1.34
CCNA1P78396 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.68□□□□□ -1.34
CCNA1P78396 AL022323.4-201ENST00000623980 13120 ntBASIC6.68□□□□□ -1.34
CCNA1P78396 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
CCNA1P78396 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CCNA1P78396 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CCNA1P78396 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CCNA1P78396 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.68□□□□□ -1.34
CCNA1P78396 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CCNA1P78396 WBP11P1-201ENST00000562560 1931 ntBASIC6.68□□□□□ -1.34
CCNA1P78396 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC6.68□□□□□ -1.34
CCNA1P78396 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.68□□□□□ -1.34
CCNA1P78396 AC114786.1-201ENST00000512892 1415 ntBASIC6.67□□□□□ -1.34
CCNA1P78396 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC6.67□□□□□ -1.34
CCNA1P78396 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CCNA1P78396 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.67□□□□□ -1.34
CCNA1P78396 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CCNA1P78396 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CCNA1P78396 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CCNA1P78396 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CCNA1P78396 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC6.67□□□□□ -1.34
CCNA1P78396 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CCNA1P78396 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CCNA1P78396 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC6.67□□□□□ -1.34
CCNA1P78396 LDHBP2-201ENST00000456969 1005 ntBASIC6.67□□□□□ -1.34
CCNA1P78396 AC011225.1-201ENST00000457751 369 ntBASIC6.67□□□□□ -1.34
CCNA1P78396 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.67□□□□□ -1.34
CCNA1P78396 AC100832.1-201ENST00000471945 383 ntBASIC6.67□□□□□ -1.34
CCNA1P78396 RN7SL583P-201ENST00000475692 287 ntBASIC6.67□□□□□ -1.34
CCNA1P78396 RPS3AP15-201ENST00000483874 781 ntBASIC6.67□□□□□ -1.34
CCNA1P78396 RN7SL30P-201ENST00000488416 306 ntBASIC6.67□□□□□ -1.34
CCNA1P78396 AC009120.1-201ENST00000493458 473 ntBASIC6.67□□□□□ -1.34
CCNA1P78396 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC6.67□□□□□ -1.34
CCNA1P78396 AC006499.3-201ENST00000506077 748 ntBASIC6.67□□□□□ -1.34
CCNA1P78396 OR5M14P-201ENST00000506803 618 ntBASIC6.67□□□□□ -1.34
CCNA1P78396 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
CCNA1P78396 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC6.67□□□□□ -1.34
CCNA1P78396 CYP4F27P-201ENST00000514557 494 ntBASIC6.67□□□□□ -1.34
CCNA1P78396 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC6.67□□□□□ -1.34
CCNA1P78396 AC021678.3-201ENST00000517893 476 ntBASIC6.67□□□□□ -1.34
CCNA1P78396 APPL2-203ENST00000546731 684 ntTSL 2 BASIC6.67□□□□□ -1.34
CCNA1P78396 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.67□□□□□ -1.34
CCNA1P78396 CYCSP1-201ENST00000604815 315 ntBASIC6.67□□□□□ -1.34
CCNA1P78396 AC079414.3-201ENST00000612986 1090 ntBASIC6.67□□□□□ -1.34
CCNA1P78396 AC037198.3-201ENST00000616754 526 ntBASIC6.67□□□□□ -1.34
CCNA1P78396 CASC22-202ENST00000628396 802 ntTSL 5 BASIC6.67□□□□□ -1.34
CCNA1P78396 CASC19-264ENST00000641912 1184 ntBASIC6.67□□□□□ -1.34
CCNA1P78396 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
CCNA1P78396 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.67□□□□□ -1.34
CCNA1P78396 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CCNA1P78396 AC235565.1-201ENST00000456962 1325 ntBASIC6.67□□□□□ -1.34
CCNA1P78396 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CCNA1P78396 SRRM1P3-201ENST00000426911 2678 ntBASIC6.67□□□□□ -1.34
CCNA1P78396 AC009779.8-201ENST00000641684 4384 ntBASIC6.67□□□□□ -1.34
CCNA1P78396 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.67□□□□□ -1.34
CCNA1P78396 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.67□□□□□ -1.34
CCNA1P78396 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC6.67□□□□□ -1.34
CCNA1P78396 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms