Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
COPAP53621 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
COPAP53621 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
COPAP53621 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
COPAP53621 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
COPAP53621 EEF1A1P9-201ENST00000514975 1383 ntBASIC6.43□□□□□ -1.38
COPAP53621 ALB-220ENST00000621628 1606 ntTSL 5 BASIC6.43□□□□□ -1.38
COPAP53621 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
COPAP53621 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.43□□□□□ -1.38
COPAP53621 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
COPAP53621 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.42□□□□□ -1.38
COPAP53621 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
COPAP53621 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.42□□□□□ -1.38
COPAP53621 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.42□□□□□ -1.38
COPAP53621 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
COPAP53621 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC6.42□□□□□ -1.38
COPAP53621 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
COPAP53621 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
COPAP53621 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
COPAP53621 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.42□□□□□ -1.38
COPAP53621 AC110373.1-201ENST00000505994 3505 ntBASIC6.42□□□□□ -1.38
COPAP53621 AP000568.1-201ENST00000282964 442 ntBASIC6.42□□□□□ -1.38
COPAP53621 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
COPAP53621 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
COPAP53621 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.42□□□□□ -1.38
COPAP53621 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC6.42□□□□□ -1.38
COPAP53621 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC6.42□□□□□ -1.38
COPAP53621 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC6.42□□□□□ -1.38
COPAP53621 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC6.42□□□□□ -1.38
COPAP53621 AC097463.1-201ENST00000447288 481 ntBASIC6.42□□□□□ -1.38
COPAP53621 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC6.42□□□□□ -1.38
COPAP53621 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.42□□□□□ -1.38
COPAP53621 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.42□□□□□ -1.38
COPAP53621 AL133351.3-201ENST00000454998 193 ntBASIC6.42□□□□□ -1.38
COPAP53621 AC068228.1-201ENST00000461723 211 ntBASIC6.42□□□□□ -1.38
COPAP53621 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC6.42□□□□□ -1.38
COPAP53621 AC128716.1-201ENST00000475129 166 ntBASIC6.42□□□□□ -1.38
COPAP53621 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
COPAP53621 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.42□□□□□ -1.38
COPAP53621 RBBP4P1-201ENST00000502424 1276 ntBASIC6.42□□□□□ -1.38
COPAP53621 AC016550.1-201ENST00000505348 785 ntBASIC6.42□□□□□ -1.38
COPAP53621 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC6.42□□□□□ -1.38
COPAP53621 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.42□□□□□ -1.38
COPAP53621 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC6.42□□□□□ -1.38
COPAP53621 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC6.42□□□□□ -1.38
COPAP53621 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC6.42□□□□□ -1.38
COPAP53621 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC6.42□□□□□ -1.38
COPAP53621 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.42□□□□□ -1.38
COPAP53621 AC027176.2-201ENST00000559166 746 ntBASIC6.42□□□□□ -1.38
COPAP53621 CYCSP38-201ENST00000559840 322 ntBASIC6.42□□□□□ -1.38
COPAP53621 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC6.42□□□□□ -1.38
COPAP53621 AC005332.4-201ENST00000592752 579 ntBASIC6.42□□□□□ -1.38
COPAP53621 AL138895.2-201ENST00000603019 178 ntBASIC6.42□□□□□ -1.38
COPAP53621 AC108865.2-201ENST00000606881 432 ntBASIC6.42□□□□□ -1.38
COPAP53621 AP006248.3-201ENST00000623580 594 ntBASIC6.42□□□□□ -1.38
COPAP53621 AC022919.1-201ENST00000624979 626 ntBASIC6.42□□□□□ -1.38
COPAP53621 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC6.42□□□□□ -1.38
COPAP53621 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
COPAP53621 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC6.42□□□□□ -1.38
COPAP53621 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
COPAP53621 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
COPAP53621 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.42□□□□□ -1.38
COPAP53621 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC6.42□□□□□ -1.38
COPAP53621 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.42□□□□□ -1.38
COPAP53621 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.42□□□□□ -1.38
COPAP53621 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
COPAP53621 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
COPAP53621 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
COPAP53621 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
COPAP53621 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.41□□□□□ -1.38
COPAP53621 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC6.41□□□□□ -1.38
COPAP53621 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.41□□□□□ -1.38
COPAP53621 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
COPAP53621 LYARP1-201ENST00000436977 1501 ntBASIC6.41□□□□□ -1.38
COPAP53621 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
COPAP53621 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
COPAP53621 AC110792.3-201ENST00000595906 1614 ntBASIC6.41□□□□□ -1.38
COPAP53621 AC027575.3-201ENST00000583058 2747 ntBASIC6.41□□□□□ -1.38
COPAP53621 RNA5SP110-201ENST00000362638 115 ntBASIC6.41□□□□□ -1.38
COPAP53621 RNU6-40P-201ENST00000384254 107 ntBASIC6.41□□□□□ -1.38
COPAP53621 SNORA51.9-201ENST00000384295 124 ntBASIC6.41□□□□□ -1.38
COPAP53621 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
COPAP53621 OR2W4P-201ENST00000406496 926 ntBASIC6.41□□□□□ -1.38
COPAP53621 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
COPAP53621 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC6.41□□□□□ -1.38
COPAP53621 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC6.41□□□□□ -1.38
COPAP53621 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC6.41□□□□□ -1.38
COPAP53621 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC6.41□□□□□ -1.38
COPAP53621 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC6.41□□□□□ -1.38
COPAP53621 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC6.41□□□□□ -1.38
COPAP53621 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC6.41□□□□□ -1.38
COPAP53621 AC073916.1-201ENST00000545095 130 ntBASIC6.41□□□□□ -1.38
COPAP53621 DCN-209ENST00000546745 1026 ntTSL 3 BASIC6.41□□□□□ -1.38
COPAP53621 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC6.41□□□□□ -1.38
COPAP53621 AC092868.3-201ENST00000560515 784 ntBASIC6.41□□□□□ -1.38
COPAP53621 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC6.41□□□□□ -1.38
COPAP53621 TEX41-218ENST00000596540 882 ntTSL 5 BASIC6.41□□□□□ -1.38
COPAP53621 AC011458.1-201ENST00000604034 617 ntBASIC6.41□□□□□ -1.38
COPAP53621 AC024589.2-201ENST00000605642 1294 ntBASIC6.41□□□□□ -1.38
COPAP53621 AL450270.1-201ENST00000606160 391 ntBASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms