Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 RPL10P14-201ENST00000565265 298 ntBASIC6.97□□□□□ -1.29
NUP98P52948 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.97□□□□□ -1.29
NUP98P52948 AL133481.2-203ENST00000607558 139 ntBASIC6.97□□□□□ -1.29
NUP98P52948 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
NUP98P52948 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC6.97□□□□□ -1.29
NUP98P52948 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC6.97□□□□□ -1.29
NUP98P52948 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
NUP98P52948 AL139805.2-201ENST00000455305 2433 ntBASIC6.97□□□□□ -1.29
NUP98P52948 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
NUP98P52948 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
NUP98P52948 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
NUP98P52948 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
NUP98P52948 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
NUP98P52948 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
NUP98P52948 OLMALINC-203ENST00000641087 3779 ntBASIC6.97□□□□□ -1.29
NUP98P52948 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
NUP98P52948 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
NUP98P52948 RNA5SP319-201ENST00000362768 119 ntBASIC6.97□□□□□ -1.29
NUP98P52948 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
NUP98P52948 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
NUP98P52948 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC6.97□□□□□ -1.29
NUP98P52948 AC231760.1-201ENST00000498002 260 ntBASIC6.97□□□□□ -1.29
NUP98P52948 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC6.97□□□□□ -1.29
NUP98P52948 AC007346.2-201ENST00000564816 892 ntBASIC6.97□□□□□ -1.29
NUP98P52948 AC006115.2-201ENST00000596823 202 ntBASIC6.97□□□□□ -1.29
NUP98P52948 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC6.97□□□□□ -1.29
NUP98P52948 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
NUP98P52948 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
NUP98P52948 ASXL2-201ENST00000336112 8889 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.29
NUP98P52948 TIAM2-208ENST00000461783 6981 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.29
NUP98P52948 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
NUP98P52948 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
NUP98P52948 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
NUP98P52948 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
NUP98P52948 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
NUP98P52948 MIR585-201ENST00000384887 94 ntBASIC6.96□□□□□ -1.3
NUP98P52948 FABP7P2-201ENST00000429946 379 ntBASIC6.96□□□□□ -1.3
NUP98P52948 GAPDHP58-201ENST00000438477 1006 ntBASIC6.96□□□□□ -1.3
NUP98P52948 AL672138.1-201ENST00000450604 1015 ntBASIC6.96□□□□□ -1.3
NUP98P52948 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC6.96□□□□□ -1.3
NUP98P52948 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC6.96□□□□□ -1.3
NUP98P52948 AC127381.1-201ENST00000555979 939 ntBASIC6.96□□□□□ -1.3
NUP98P52948 AGGF1P7-201ENST00000562369 913 ntBASIC6.96□□□□□ -1.3
NUP98P52948 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC6.96□□□□□ -1.3
NUP98P52948 MIR3691-201ENST00000578066 90 ntBASIC6.96□□□□□ -1.3
NUP98P52948 NANOGP3-201ENST00000605855 286 ntBASIC6.96□□□□□ -1.3
NUP98P52948 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC6.96□□□□□ -1.3
NUP98P52948 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.96□□□□□ -1.3
NUP98P52948 SAMMSON-209ENST00000641222 1100 ntBASIC6.96□□□□□ -1.3
NUP98P52948 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC6.96□□□□□ -1.3
NUP98P52948 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
NUP98P52948 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
NUP98P52948 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
NUP98P52948 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC6.96□□□□□ -1.3
NUP98P52948 PRNCR1-201ENST00000635449 12727 ntBASIC6.96□□□□□ -1.3
NUP98P52948 HSPD1P7-201ENST00000447985 1686 ntBASIC6.96□□□□□ -1.3
NUP98P52948 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
NUP98P52948 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
NUP98P52948 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.95□□□□□ -1.3
NUP98P52948 AC092070.2-203ENST00000598377 3644 ntBASIC6.95□□□□□ -1.3
NUP98P52948 RNU1-149P-201ENST00000390870 161 ntBASIC6.95□□□□□ -1.3
NUP98P52948 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC6.95□□□□□ -1.3
NUP98P52948 RN7SL51P-201ENST00000468230 285 ntBASIC6.95□□□□□ -1.3
NUP98P52948 RPL7P39-201ENST00000481157 744 ntBASIC6.95□□□□□ -1.3
NUP98P52948 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC6.95□□□□□ -1.3
NUP98P52948 AC072052.1-201ENST00000496556 306 ntBASIC6.95□□□□□ -1.3
NUP98P52948 AC078899.1-201ENST00000521432 1185 ntBASIC6.95□□□□□ -1.3
NUP98P52948 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC6.95□□□□□ -1.3
NUP98P52948 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC6.95□□□□□ -1.3
NUP98P52948 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC6.95□□□□□ -1.3
NUP98P52948 AC118658.2-201ENST00000618697 459 ntBASIC6.95□□□□□ -1.3
NUP98P52948 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC6.95□□□□□ -1.3
NUP98P52948 MT-RNR2-201ENST00000387347 1559 ntBASIC6.95□□□□□ -1.3
NUP98P52948 GCNT3-201ENST00000396065 4933 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
NUP98P52948 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.95□□□□□ -1.3
NUP98P52948 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
NUP98P52948 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC6.95□□□□□ -1.3
NUP98P52948 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
NUP98P52948 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.95□□□□□ -1.3
NUP98P52948 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
NUP98P52948 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
NUP98P52948 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC6.95□□□□□ -1.3
NUP98P52948 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
NUP98P52948 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.95□□□□□ -1.3
NUP98P52948 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
NUP98P52948 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC6.95□□□□□ -1.3
NUP98P52948 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
NUP98P52948 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
NUP98P52948 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC6.94□□□□□ -1.3
NUP98P52948 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
NUP98P52948 RN7SKP279-201ENST00000411383 298 ntBASIC6.94□□□□□ -1.3
NUP98P52948 VN1R21P-201ENST00000426703 765 ntBASIC6.94□□□□□ -1.3
NUP98P52948 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC6.94□□□□□ -1.3
NUP98P52948 RSU1P1-201ENST00000453416 441 ntBASIC6.94□□□□□ -1.3
NUP98P52948 RN7SL808P-201ENST00000496066 299 ntBASIC6.94□□□□□ -1.3
NUP98P52948 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC6.94□□□□□ -1.3
NUP98P52948 OR5AM1P-201ENST00000532136 1032 ntBASIC6.94□□□□□ -1.3
NUP98P52948 AL353729.2-201ENST00000605859 1249 ntBASIC6.94□□□□□ -1.3
NUP98P52948 AC090510.2-201ENST00000617465 629 ntBASIC6.94□□□□□ -1.3
NUP98P52948 AL445528.2-201ENST00000620582 470 ntBASIC6.94□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms