Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
XPAP23025 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC6.52□□□□□ -1.37
XPAP23025 RNU6-468P-201ENST00000384003 109 ntBASIC6.52□□□□□ -1.37
XPAP23025 SNORA79B-201ENST00000410557 148 ntBASIC6.52□□□□□ -1.37
XPAP23025 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC6.52□□□□□ -1.37
XPAP23025 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
XPAP23025 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
XPAP23025 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC6.52□□□□□ -1.37
XPAP23025 RPL12P28-201ENST00000430852 489 ntBASIC6.52□□□□□ -1.37
XPAP23025 BX119904.1-201ENST00000432026 348 ntBASIC6.52□□□□□ -1.37
XPAP23025 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC6.52□□□□□ -1.37
XPAP23025 AL035246.1-201ENST00000433554 1255 ntBASIC6.52□□□□□ -1.37
XPAP23025 AC092447.2-201ENST00000435487 669 ntBASIC6.52□□□□□ -1.37
XPAP23025 MTCO1P53-201ENST00000441633 699 ntBASIC6.52□□□□□ -1.37
XPAP23025 AC092647.3-201ENST00000443044 633 ntBASIC6.52□□□□□ -1.37
XPAP23025 MTND2P22-201ENST00000444325 1033 ntBASIC6.52□□□□□ -1.37
XPAP23025 COX4I1P2-201ENST00000447446 547 ntBASIC6.52□□□□□ -1.37
XPAP23025 AC097359.1-201ENST00000447946 463 ntBASIC6.52□□□□□ -1.37
XPAP23025 AL157884.3-201ENST00000448273 1184 ntBASIC6.52□□□□□ -1.37
XPAP23025 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC6.52□□□□□ -1.37
XPAP23025 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC6.52□□□□□ -1.37
XPAP23025 AC019084.1-201ENST00000457337 432 ntBASIC6.52□□□□□ -1.37
XPAP23025 CBX1P5-201ENST00000475330 559 ntBASIC6.52□□□□□ -1.37
XPAP23025 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC6.52□□□□□ -1.37
XPAP23025 SNORA58-201ENST00000505219 137 ntBASIC6.52□□□□□ -1.37
XPAP23025 AC113367.2-201ENST00000505749 160 ntBASIC6.52□□□□□ -1.37
XPAP23025 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
XPAP23025 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC6.52□□□□□ -1.37
XPAP23025 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC6.52□□□□□ -1.37
XPAP23025 AC093816.1-201ENST00000515076 913 ntBASIC6.52□□□□□ -1.37
XPAP23025 RN7SKP98-201ENST00000517070 156 ntBASIC6.52□□□□□ -1.37
XPAP23025 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC6.52□□□□□ -1.37
XPAP23025 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC6.52□□□□□ -1.37
XPAP23025 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC6.52□□□□□ -1.37
XPAP23025 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC6.52□□□□□ -1.37
XPAP23025 OR4A40P-201ENST00000533878 948 ntBASIC6.52□□□□□ -1.37
XPAP23025 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
XPAP23025 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
XPAP23025 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC6.52□□□□□ -1.37
XPAP23025 AC121758.1-202ENST00000556917 658 ntBASIC6.52□□□□□ -1.37
XPAP23025 CSNK1A1P1-202ENST00000563423 981 ntBASIC6.52□□□□□ -1.37
XPAP23025 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
XPAP23025 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
XPAP23025 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC6.52□□□□□ -1.37
XPAP23025 WBP1LP12-201ENST00000604449 331 ntBASIC6.52□□□□□ -1.37
XPAP23025 MIR6780B-201ENST00000610307 79 ntBASIC6.52□□□□□ -1.37
XPAP23025 AC084782.3-201ENST00000612282 578 ntBASIC6.52□□□□□ -1.37
XPAP23025 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC6.52□□□□□ -1.37
XPAP23025 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC6.52□□□□□ -1.37
XPAP23025 AL132640.3-201ENST00000630473 177 ntBASIC6.52□□□□□ -1.37
XPAP23025 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC6.52□□□□□ -1.37
XPAP23025 LINC02495-203ENST00000636704 242 ntBASIC6.52□□□□□ -1.37
XPAP23025 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
XPAP23025 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
XPAP23025 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC6.52□□□□□ -1.37
XPAP23025 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
XPAP23025 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
XPAP23025 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
XPAP23025 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
XPAP23025 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
XPAP23025 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
XPAP23025 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
XPAP23025 AC062022.1-201ENST00000451026 1684 ntBASIC6.52□□□□□ -1.37
XPAP23025 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
XPAP23025 CCAT2-201ENST00000630920 1752 ntBASIC6.52□□□□□ -1.37
XPAP23025 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
XPAP23025 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
XPAP23025 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
XPAP23025 AC125238.2-201ENST00000430003 1440 ntBASIC6.51□□□□□ -1.37
XPAP23025 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
XPAP23025 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
XPAP23025 AC090181.3-201ENST00000624777 1514 ntBASIC6.51□□□□□ -1.37
XPAP23025 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
XPAP23025 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
XPAP23025 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
XPAP23025 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
XPAP23025 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.51□□□□□ -1.37
XPAP23025 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
XPAP23025 AC009120.2-204ENST00000621548 2032 ntBASIC6.51□□□□□ -1.37
XPAP23025 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
XPAP23025 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
XPAP23025 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
XPAP23025 RNU5B-4P-201ENST00000363508 111 ntBASIC6.51□□□□□ -1.37
XPAP23025 TINAG-202ENST00000370864 692 ntTSL 2 BASIC6.51□□□□□ -1.37
XPAP23025 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
XPAP23025 TAF9BP2-201ENST00000400856 499 ntBASIC6.51□□□□□ -1.37
XPAP23025 RPL23AP18-201ENST00000416139 468 ntBASIC6.51□□□□□ -1.37
XPAP23025 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC6.51□□□□□ -1.37
XPAP23025 RPL36P18-201ENST00000419316 318 ntBASIC6.51□□□□□ -1.37
XPAP23025 RPL23AP85-201ENST00000421838 433 ntBASIC6.51□□□□□ -1.37
XPAP23025 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC6.51□□□□□ -1.37
XPAP23025 AC092648.1-201ENST00000425870 423 ntBASIC6.51□□□□□ -1.37
XPAP23025 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.51□□□□□ -1.37
XPAP23025 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
XPAP23025 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.51□□□□□ -1.37
XPAP23025 MTCYBP31-201ENST00000438855 1122 ntBASIC6.51□□□□□ -1.37
XPAP23025 AL117351.1-201ENST00000438864 766 ntBASIC6.51□□□□□ -1.37
XPAP23025 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.51□□□□□ -1.37
XPAP23025 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC6.51□□□□□ -1.37
XPAP23025 AL031313.1-201ENST00000448435 256 ntBASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms