Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 GMDS-AS1-215ENST00000606884 580 ntTSL 2 BASIC7.03□□□□□ -1.28
NID1P14543 5S_rRNA.20-201ENST00000612104 118 ntBASIC7.03□□□□□ -1.28
NID1P14543 AL365204.3-201ENST00000612448 685 ntBASIC7.03□□□□□ -1.28
NID1P14543 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC7.03□□□□□ -1.28
NID1P14543 AC073488.2-201ENST00000631903 751 ntBASIC7.03□□□□□ -1.28
NID1P14543 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
NID1P14543 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
NID1P14543 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC7.03□□□□□ -1.28
NID1P14543 TRIM51HP-202ENST00000530412 1823 ntBASIC7.03□□□□□ -1.28
NID1P14543 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC7.03□□□□□ -1.28
NID1P14543 HIST1H4E-201ENST00000615164 1487 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
NID1P14543 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
NID1P14543 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
NID1P14543 CAST-234ENST00000511049 3273 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
NID1P14543 UEVLD-205ENST00000396197 4156 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
NID1P14543 LRRC28-201ENST00000301981 5971 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
NID1P14543 AC135012.3-201ENST00000599841 4039 ntTSL 4 BASIC7.03□□□□□ -1.28
NID1P14543 ZNF658-206ENST00000621410 4025 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
NID1P14543 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
NID1P14543 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
NID1P14543 SLFN12L-201ENST00000260908 3119 ntAPPRIS P2 TSL 5 BASIC7.03□□□□□ -1.28
NID1P14543 MAP4K4-203ENST00000347699 3792 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
NID1P14543 AL353795.1-201ENST00000439134 1775 ntBASIC7.03□□□□□ -1.28
NID1P14543 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.28
NID1P14543 OAT-208ENST00000539214 1864 ntTSL 1 (best) BASIC7.02□□□□□ -1.28
NID1P14543 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.28
NID1P14543 SLC35A3-201ENST00000370153 5708 ntTSL 5 BASIC7.02□□□□□ -1.28
NID1P14543 CASC19-206ENST00000641028 1430 ntBASIC7.02□□□□□ -1.29
NID1P14543 NEXN-202ENST00000334785 2607 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
NID1P14543 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC7.02□□□□□ -1.29
NID1P14543 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
NID1P14543 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
NID1P14543 OPALIN-204ENST00000419479 3581 ntTSL 2 BASIC7.02□□□□□ -1.29
NID1P14543 MUC21-201ENST00000376296 3651 ntAPPRIS P2 TSL 1 (best) BASIC7.02□□□□□ -1.29
NID1P14543 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
NID1P14543 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
NID1P14543 TMEM59-204ENST00000371344 2473 ntTSL 2 BASIC7.02□□□□□ -1.29
NID1P14543 CAP1-201ENST00000340450 2592 ntAPPRIS ALT1 TSL 5 BASIC7.02□□□□□ -1.29
NID1P14543 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC7.02□□□□□ -1.29
NID1P14543 PDE4D-210ENST00000503258 2860 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
NID1P14543 HCG18-244ENST00000602516 2890 ntBASIC7.02□□□□□ -1.29
NID1P14543 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
NID1P14543 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
NID1P14543 SNORA4.1-201ENST00000364263 144 ntBASIC7.02□□□□□ -1.29
NID1P14543 RNU6-660P-201ENST00000364566 109 ntBASIC7.02□□□□□ -1.29
NID1P14543 CASP8-208ENST00000392266 1283 ntTSL 2 BASIC7.02□□□□□ -1.29
NID1P14543 AAMDC-202ENST00000393427 531 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
NID1P14543 GAS8-AS1-201ENST00000408886 435 ntBASIC7.02□□□□□ -1.29
NID1P14543 C1D-203ENST00000409302 772 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
NID1P14543 RPL34P19-201ENST00000415903 342 ntBASIC7.02□□□□□ -1.29
NID1P14543 AC003071.2-201ENST00000423857 315 ntBASIC7.02□□□□□ -1.29
NID1P14543 AC007742.1-201ENST00000425789 329 ntBASIC7.02□□□□□ -1.29
NID1P14543 AC130472.1-201ENST00000427885 309 ntBASIC7.02□□□□□ -1.29
NID1P14543 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC7.02□□□□□ -1.29
NID1P14543 AL157402.1-201ENST00000429469 363 ntTSL 3 BASIC7.02□□□□□ -1.29
NID1P14543 ELOCP26-201ENST00000436067 329 ntBASIC7.02□□□□□ -1.29
NID1P14543 LINC01805-201ENST00000436433 572 ntTSL 5 BASIC7.02□□□□□ -1.29
NID1P14543 AL049646.2-201ENST00000436848 258 ntTSL 2 BASIC7.02□□□□□ -1.29
NID1P14543 AC007365.1-201ENST00000439964 627 ntTSL 2 BASIC7.02□□□□□ -1.29
NID1P14543 USP9YP15-201ENST00000442391 422 ntBASIC7.02□□□□□ -1.29
NID1P14543 CLDN34-201ENST00000445307 995 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
NID1P14543 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC7.02□□□□□ -1.29
NID1P14543 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC7.02□□□□□ -1.29
NID1P14543 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC7.02□□□□□ -1.29
NID1P14543 RN7SL55P-201ENST00000464534 297 ntBASIC7.02□□□□□ -1.29
NID1P14543 AC115223.1-201ENST00000466377 870 ntBASIC7.02□□□□□ -1.29
NID1P14543 RPS4XP15-201ENST00000489210 795 ntBASIC7.02□□□□□ -1.29
NID1P14543 AC018710.1-201ENST00000506509 158 ntBASIC7.02□□□□□ -1.29
NID1P14543 AC108120.1-201ENST00000506543 991 ntBASIC7.02□□□□□ -1.29
NID1P14543 RNU6ATAC39P-201ENST00000516309 149 ntBASIC7.02□□□□□ -1.29
NID1P14543 LINC00967-204ENST00000518412 271 ntTSL 5 BASIC7.02□□□□□ -1.29
NID1P14543 AP003385.2-201ENST00000524910 973 ntBASIC7.02□□□□□ -1.29
NID1P14543 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC7.02□□□□□ -1.29
NID1P14543 AP001922.2-201ENST00000530435 390 ntTSL 3 BASIC7.02□□□□□ -1.29
NID1P14543 AP000757.2-201ENST00000531850 557 ntTSL 5 BASIC7.02□□□□□ -1.29
NID1P14543 OR7K1P-201ENST00000546439 926 ntBASIC7.02□□□□□ -1.29
NID1P14543 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC7.02□□□□□ -1.29
NID1P14543 TIMM9-205ENST00000555404 430 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
NID1P14543 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC7.02□□□□□ -1.29
NID1P14543 ARL17A-205ENST00000573185 581 ntAPPRIS ALT2 TSL 3 BASIC7.02□□□□□ -1.29
NID1P14543 RPS3AP23-202ENST00000574601 686 ntBASIC7.02□□□□□ -1.29
NID1P14543 ARL17B-206ENST00000575698 581 ntTSL 3 BASIC7.02□□□□□ -1.29
NID1P14543 MIR3137-201ENST00000577367 75 ntBASIC7.02□□□□□ -1.29
NID1P14543 KCTD2-206ENST00000581589 993 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
NID1P14543 AC005154.1-225ENST00000581665 564 ntTSL 4 BASIC7.02□□□□□ -1.29
NID1P14543 AC090774.2-201ENST00000584708 322 ntBASIC7.02□□□□□ -1.29
NID1P14543 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC7.02□□□□□ -1.29
NID1P14543 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC7.02□□□□□ -1.29
NID1P14543 AC093074.1-201ENST00000590280 556 ntTSL 4 BASIC7.02□□□□□ -1.29
NID1P14543 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
NID1P14543 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
NID1P14543 IGKV1OR1-1-201ENST00000613775 347 ntBASIC7.02□□□□□ -1.29
NID1P14543 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
NID1P14543 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC7.02□□□□□ -1.29
NID1P14543 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC7.02□□□□□ -1.29
NID1P14543 Z93929.1-201ENST00000418200 1475 ntBASIC7.02□□□□□ -1.29
NID1P14543 CASP12-212ENST00000613512 1451 ntAPPRIS P5 TSL 1 (best) BASIC7.02□□□□□ -1.29
NID1P14543 LINC02535-201ENST00000455071 2513 ntTSL 2 BASIC7.02□□□□□ -1.29
NID1P14543 COX7C-203ENST00000509578 1584 ntAPPRIS P2 TSL 1 (best) BASIC7.02□□□□□ -1.29
NID1P14543 KLHL32-207ENST00000620278 2642 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 352.4 ms