Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
HLA-DOAP06340 AL137141.1-201ENST00000624622 4836 ntBASIC7.01□□□□□ -1.29
HLA-DOAP06340 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
HLA-DOAP06340 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
HLA-DOAP06340 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
HLA-DOAP06340 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC7.01□□□□□ -1.29
HLA-DOAP06340 RSL24D1P1-201ENST00000404972 493 ntBASIC7.01□□□□□ -1.29
HLA-DOAP06340 RN7SKP229-201ENST00000410465 302 ntBASIC7.01□□□□□ -1.29
HLA-DOAP06340 RN7SKP293-201ENST00000411389 296 ntBASIC7.01□□□□□ -1.29
HLA-DOAP06340 AC093155.2-201ENST00000420734 937 ntBASIC7.01□□□□□ -1.29
HLA-DOAP06340 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC7.01□□□□□ -1.29
HLA-DOAP06340 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC7.01□□□□□ -1.29
HLA-DOAP06340 AC079355.1-201ENST00000421770 223 ntBASIC7.01□□□□□ -1.29
HLA-DOAP06340 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
HLA-DOAP06340 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC7.01□□□□□ -1.29
HLA-DOAP06340 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
HLA-DOAP06340 AL645638.1-201ENST00000440519 361 ntBASIC7.01□□□□□ -1.29
HLA-DOAP06340 RPS27AP2-201ENST00000457576 465 ntBASIC7.01□□□□□ -1.29
HLA-DOAP06340 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC7.01□□□□□ -1.29
HLA-DOAP06340 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC7.01□□□□□ -1.29
HLA-DOAP06340 CYP4F27P-201ENST00000514557 494 ntBASIC7.01□□□□□ -1.29
HLA-DOAP06340 SCARNA21.2-201ENST00000516600 166 ntBASIC7.01□□□□□ -1.29
HLA-DOAP06340 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC7.01□□□□□ -1.29
HLA-DOAP06340 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC7.01□□□□□ -1.29
HLA-DOAP06340 CR383656.14-201ENST00000551951 406 ntBASIC7.01□□□□□ -1.29
HLA-DOAP06340 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC7.01□□□□□ -1.29
HLA-DOAP06340 TXNP4-201ENST00000575018 310 ntBASIC7.01□□□□□ -1.29
HLA-DOAP06340 CYCSP1-201ENST00000604815 315 ntBASIC7.01□□□□□ -1.29
HLA-DOAP06340 AC145423.1-201ENST00000605712 336 ntBASIC7.01□□□□□ -1.29
HLA-DOAP06340 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC7.01□□□□□ -1.29
HLA-DOAP06340 AL391834.1-201ENST00000609609 560 ntBASIC7.01□□□□□ -1.29
HLA-DOAP06340 AC109309.2-201ENST00000612597 332 ntBASIC7.01□□□□□ -1.29
HLA-DOAP06340 AC004477.3-201ENST00000614061 590 ntBASIC7.01□□□□□ -1.29
HLA-DOAP06340 AC108359.1-201ENST00000616451 1211 ntBASIC7.01□□□□□ -1.29
HLA-DOAP06340 AC006249.1-201ENST00000621223 471 ntBASIC7.01□□□□□ -1.29
HLA-DOAP06340 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
HLA-DOAP06340 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
HLA-DOAP06340 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
HLA-DOAP06340 Z82209.2-201ENST00000623410 2012 ntBASIC7.01□□□□□ -1.29
HLA-DOAP06340 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC7.01□□□□□ -1.29
HLA-DOAP06340 AL031123.3-201ENST00000623345 1837 ntBASIC7.01□□□□□ -1.29
HLA-DOAP06340 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
HLA-DOAP06340 THAP12P9-201ENST00000503971 2360 ntBASIC7.01□□□□□ -1.29
HLA-DOAP06340 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC7.01□□□□□ -1.29
HLA-DOAP06340 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC7□□□□□ -1.29
HLA-DOAP06340 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC7□□□□□ -1.29
HLA-DOAP06340 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
HLA-DOAP06340 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
HLA-DOAP06340 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC7□□□□□ -1.29
HLA-DOAP06340 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
HLA-DOAP06340 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
HLA-DOAP06340 SNORA72.3-201ENST00000365074 132 ntBASIC7□□□□□ -1.29
HLA-DOAP06340 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC7□□□□□ -1.29
HLA-DOAP06340 MTATP6P31-201ENST00000406985 692 ntBASIC7□□□□□ -1.29
HLA-DOAP06340 OR2AT2P-201ENST00000413438 905 ntBASIC7□□□□□ -1.29
HLA-DOAP06340 HMGA1P8-201ENST00000414130 321 ntBASIC7□□□□□ -1.29
HLA-DOAP06340 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC7□□□□□ -1.29
HLA-DOAP06340 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC7□□□□□ -1.29
HLA-DOAP06340 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC7□□□□□ -1.29
HLA-DOAP06340 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC7□□□□□ -1.29
HLA-DOAP06340 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC7□□□□□ -1.29
HLA-DOAP06340 SUMO2P3-201ENST00000438311 288 ntBASIC7□□□□□ -1.29
HLA-DOAP06340 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC7□□□□□ -1.29
HLA-DOAP06340 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC7□□□□□ -1.29
HLA-DOAP06340 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC7□□□□□ -1.29
HLA-DOAP06340 AC093166.4-201ENST00000457867 318 ntBASIC7□□□□□ -1.29
HLA-DOAP06340 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC7□□□□□ -1.29
HLA-DOAP06340 ACA64.4-201ENST00000459070 127 ntBASIC7□□□□□ -1.29
HLA-DOAP06340 RPSAP39-201ENST00000467439 883 ntBASIC7□□□□□ -1.29
HLA-DOAP06340 AC023818.1-201ENST00000498379 384 ntBASIC7□□□□□ -1.29
HLA-DOAP06340 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC7□□□□□ -1.29
HLA-DOAP06340 MTND5P21-201ENST00000531961 522 ntBASIC7□□□□□ -1.29
HLA-DOAP06340 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC7□□□□□ -1.29
HLA-DOAP06340 MIR4301-201ENST00000577203 66 ntBASIC7□□□□□ -1.29
HLA-DOAP06340 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC7□□□□□ -1.29
HLA-DOAP06340 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC7□□□□□ -1.29
HLA-DOAP06340 BNIP3P19-201ENST00000605397 577 ntBASIC7□□□□□ -1.29
HLA-DOAP06340 MTCO1P1-201ENST00000624263 1081 ntBASIC7□□□□□ -1.29
HLA-DOAP06340 AL049767.1-202ENST00000637826 242 ntBASIC7□□□□□ -1.29
HLA-DOAP06340 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
HLA-DOAP06340 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC7□□□□□ -1.29
HLA-DOAP06340 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC7□□□□□ -1.29
HLA-DOAP06340 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
HLA-DOAP06340 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
HLA-DOAP06340 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
HLA-DOAP06340 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
HLA-DOAP06340 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC7□□□□□ -1.29
HLA-DOAP06340 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC7□□□□□ -1.29
HLA-DOAP06340 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC6.99□□□□□ -1.29
HLA-DOAP06340 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.99□□□□□ -1.29
HLA-DOAP06340 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC6.99□□□□□ -1.29
HLA-DOAP06340 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
HLA-DOAP06340 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.99□□□□□ -1.29
HLA-DOAP06340 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
HLA-DOAP06340 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
HLA-DOAP06340 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.99□□□□□ -1.29
HLA-DOAP06340 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
HLA-DOAP06340 MTND4P21-201ENST00000453886 1357 ntBASIC6.99□□□□□ -1.29
HLA-DOAP06340 RAD17P2-201ENST00000451754 1977 ntBASIC6.99□□□□□ -1.29
HLA-DOAP06340 AL353763.1-201ENST00000624467 1628 ntBASIC6.99□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms