Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 PHACTR2-201ENST00000305766 1851 ntAPPRIS P3 TSL 2 BASIC7.41□□□□□ -1.22
SOX1O00570 GC-201ENST00000273951 1972 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
SOX1O00570 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
SOX1O00570 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
SOX1O00570 KDM4C-205ENST00000428870 3039 ntTSL 2 BASIC7.4□□□□□ -1.22
SOX1O00570 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC7.4□□□□□ -1.22
SOX1O00570 IQGAP1-201ENST00000268182 7233 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
SOX1O00570 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
SOX1O00570 TYW1B-203ENST00000620995 3113 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
SOX1O00570 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
SOX1O00570 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.22
SOX1O00570 PTPRT-211ENST00000618610 3230 ntTSL 5 BASIC7.4□□□□□ -1.22
SOX1O00570 KIAA1217-201ENST00000307544 3281 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
SOX1O00570 CD46-208ENST00000367042 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
SOX1O00570 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC7.4□□□□□ -1.22
SOX1O00570 FAM3C2-201ENST00000312214 681 ntBASIC7.4□□□□□ -1.22
SOX1O00570 OR4A16-201ENST00000314721 1081 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
SOX1O00570 NACA3P-201ENST00000359690 648 ntBASIC7.4□□□□□ -1.22
SOX1O00570 NOX1-203ENST00000372964 661 ntTSL 2 BASIC7.4□□□□□ -1.22
SOX1O00570 U3.52-201ENST00000384034 216 ntBASIC7.4□□□□□ -1.22
SOX1O00570 RNA5SP284-201ENST00000384547 118 ntBASIC7.4□□□□□ -1.22
SOX1O00570 MT-TH-201ENST00000387441 69 ntBASIC7.4□□□□□ -1.22
SOX1O00570 CHMP1B2P-201ENST00000399581 597 ntBASIC7.4□□□□□ -1.22
SOX1O00570 AK4P4-201ENST00000419465 646 ntBASIC7.4□□□□□ -1.22
SOX1O00570 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
SOX1O00570 EIF1P1-201ENST00000421436 341 ntBASIC7.4□□□□□ -1.22
SOX1O00570 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC7.4□□□□□ -1.22
SOX1O00570 C1DP1-201ENST00000426049 402 ntBASIC7.4□□□□□ -1.22
SOX1O00570 MTCO2P19-201ENST00000427513 598 ntBASIC7.4□□□□□ -1.22
SOX1O00570 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC7.4□□□□□ -1.22
SOX1O00570 PTCSC2-201ENST00000430058 204 ntTSL 2 BASIC7.4□□□□□ -1.22
SOX1O00570 AL606662.1-201ENST00000445763 553 ntBASIC7.4□□□□□ -1.22
SOX1O00570 HMGB1P48-201ENST00000446155 598 ntBASIC7.4□□□□□ -1.22
SOX1O00570 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC7.4□□□□□ -1.22
SOX1O00570 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC7.4□□□□□ -1.22
SOX1O00570 RPS6P4-201ENST00000494693 758 ntBASIC7.4□□□□□ -1.22
SOX1O00570 LSM3P4-201ENST00000502948 309 ntBASIC7.4□□□□□ -1.22
SOX1O00570 AC113347.3-201ENST00000509113 148 ntBASIC7.4□□□□□ -1.22
SOX1O00570 FGB-207ENST00000509493 1164 ntTSL 5 BASIC7.4□□□□□ -1.22
SOX1O00570 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC7.4□□□□□ -1.22
SOX1O00570 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC7.4□□□□□ -1.22
SOX1O00570 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC7.4□□□□□ -1.22
SOX1O00570 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC7.4□□□□□ -1.22
SOX1O00570 AP001804.1-201ENST00000526868 919 ntBASIC7.4□□□□□ -1.22
SOX1O00570 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC7.4□□□□□ -1.22
SOX1O00570 AC079905.1-201ENST00000549280 475 ntBASIC7.4□□□□□ -1.22
SOX1O00570 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC7.4□□□□□ -1.22
SOX1O00570 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
SOX1O00570 SERPINE4P-201ENST00000554978 281 ntBASIC7.4□□□□□ -1.22
SOX1O00570 AC245505.1-201ENST00000556398 224 ntBASIC7.4□□□□□ -1.22
SOX1O00570 MIR548S-201ENST00000581352 82 ntBASIC7.4□□□□□ -1.22
SOX1O00570 RN7SL404P-201ENST00000582421 281 ntBASIC7.4□□□□□ -1.22
SOX1O00570 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC7.4□□□□□ -1.22
SOX1O00570 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC7.4□□□□□ -1.22
SOX1O00570 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC7.4□□□□□ -1.22
SOX1O00570 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC7.4□□□□□ -1.22
SOX1O00570 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
SOX1O00570 AC005021.1-201ENST00000608730 355 ntBASIC7.4□□□□□ -1.22
SOX1O00570 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC7.4□□□□□ -1.22
SOX1O00570 AL133370.2-201ENST00000619934 439 ntBASIC7.4□□□□□ -1.22
SOX1O00570 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
SOX1O00570 AL049767.1-202ENST00000637826 242 ntBASIC7.4□□□□□ -1.22
SOX1O00570 HRH1-203ENST00000431010 4278 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
SOX1O00570 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
SOX1O00570 NSA2-205ENST00000610426 4594 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
SOX1O00570 TTC7B-201ENST00000328459 19458 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
SOX1O00570 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.23
SOX1O00570 CDK15-202ENST00000410091 1780 ntAPPRIS P3 TSL 2 BASIC7.4□□□□□ -1.23
SOX1O00570 GATAD2B-203ENST00000634408 1825 ntTSL 5 BASIC7.4□□□□□ -1.23
SOX1O00570 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.23
SOX1O00570 UBQLNL-201ENST00000380184 2313 ntAPPRIS P1 BASIC7.4□□□□□ -1.23
SOX1O00570 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
SOX1O00570 AC010894.3-201ENST00000442996 2400 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
SOX1O00570 TPD52-213ENST00000520527 2638 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
SOX1O00570 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
SOX1O00570 MARF1-201ENST00000396368 7743 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.23
SOX1O00570 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
SOX1O00570 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SOX1O00570 ZNF286A-202ENST00000395894 5443 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
SOX1O00570 DHX8-202ENST00000540306 3809 ntTSL 2 BASIC7.39□□□□□ -1.23
SOX1O00570 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
SOX1O00570 AC123769.1-201ENST00000530992 3192 ntBASIC7.39□□□□□ -1.23
SOX1O00570 WDR31-203ENST00000374195 3101 ntAPPRIS P3 TSL 5 BASIC7.39□□□□□ -1.23
SOX1O00570 ZNF19-210ENST00000567225 2838 ntTSL 3 BASIC7.39□□□□□ -1.23
SOX1O00570 CASP8-203ENST00000323492 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
SOX1O00570 FPR3-201ENST00000339223 2620 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SOX1O00570 AC245177.1-201ENST00000375625 2369 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
SOX1O00570 AC239585.1-201ENST00000375644 2369 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
SOX1O00570 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC7.39□□□□□ -1.23
SOX1O00570 PDE4DIP-205ENST00000369354 8262 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
SOX1O00570 AL359694.2-201ENST00000567753 1615 ntBASIC7.39□□□□□ -1.23
SOX1O00570 AC019072.1-201ENST00000604535 1551 ntBASIC7.39□□□□□ -1.23
SOX1O00570 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
SOX1O00570 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC7.39□□□□□ -1.23
SOX1O00570 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
SOX1O00570 OR51M1-203ENST00000642046 4092 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
SOX1O00570 SLC13A3-202ENST00000290317 3994 ntTSL 5 BASIC7.39□□□□□ -1.23
SOX1O00570 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC7.39□□□□□ -1.23
SOX1O00570 OR51L1-201ENST00000321543 948 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
SOX1O00570 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms