Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
VPS29Q9UBQ0 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
VPS29Q9UBQ0 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.5□□□□□ -1.53
VPS29Q9UBQ0 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.5□□□□□ -1.53
VPS29Q9UBQ0 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.5□□□□□ -1.53
VPS29Q9UBQ0 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
VPS29Q9UBQ0 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
VPS29Q9UBQ0 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
VPS29Q9UBQ0 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.5□□□□□ -1.53
VPS29Q9UBQ0 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
VPS29Q9UBQ0 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
VPS29Q9UBQ0 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC5.5□□□□□ -1.53
VPS29Q9UBQ0 RNU1-65P-201ENST00000363919 148 ntBASIC5.5□□□□□ -1.53
VPS29Q9UBQ0 RNA5SP431-201ENST00000410312 120 ntBASIC5.5□□□□□ -1.53
VPS29Q9UBQ0 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
VPS29Q9UBQ0 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.5□□□□□ -1.53
VPS29Q9UBQ0 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.5□□□□□ -1.53
VPS29Q9UBQ0 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.5□□□□□ -1.53
VPS29Q9UBQ0 YRDCP3-201ENST00000456507 480 ntBASIC5.5□□□□□ -1.53
VPS29Q9UBQ0 AC005165.2-201ENST00000466070 380 ntBASIC5.5□□□□□ -1.53
VPS29Q9UBQ0 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.5□□□□□ -1.53
VPS29Q9UBQ0 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.5□□□□□ -1.53
VPS29Q9UBQ0 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC5.5□□□□□ -1.53
VPS29Q9UBQ0 AC096996.1-201ENST00000563813 325 ntBASIC5.5□□□□□ -1.53
VPS29Q9UBQ0 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
VPS29Q9UBQ0 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.5□□□□□ -1.53
VPS29Q9UBQ0 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.5□□□□□ -1.53
VPS29Q9UBQ0 COX6CP7-201ENST00000597056 208 ntBASIC5.5□□□□□ -1.53
VPS29Q9UBQ0 FAM27E4-201ENST00000605259 342 ntBASIC5.5□□□□□ -1.53
VPS29Q9UBQ0 AL353729.2-201ENST00000605859 1249 ntBASIC5.5□□□□□ -1.53
VPS29Q9UBQ0 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC5.5□□□□□ -1.53
VPS29Q9UBQ0 AC005618.4-201ENST00000625053 554 ntBASIC5.5□□□□□ -1.53
VPS29Q9UBQ0 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.5□□□□□ -1.53
VPS29Q9UBQ0 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.5□□□□□ -1.53
VPS29Q9UBQ0 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.5□□□□□ -1.53
VPS29Q9UBQ0 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
VPS29Q9UBQ0 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
VPS29Q9UBQ0 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
VPS29Q9UBQ0 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
VPS29Q9UBQ0 UGT2B24P-201ENST00000514441 1597 ntBASIC5.5□□□□□ -1.53
VPS29Q9UBQ0 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
VPS29Q9UBQ0 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
VPS29Q9UBQ0 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
VPS29Q9UBQ0 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
VPS29Q9UBQ0 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
VPS29Q9UBQ0 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
VPS29Q9UBQ0 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
VPS29Q9UBQ0 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
VPS29Q9UBQ0 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
VPS29Q9UBQ0 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.49□□□□□ -1.53
VPS29Q9UBQ0 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.49□□□□□ -1.53
VPS29Q9UBQ0 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.49□□□□□ -1.53
VPS29Q9UBQ0 MIR130A-201ENST00000385274 89 ntBASIC5.49□□□□□ -1.53
VPS29Q9UBQ0 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
VPS29Q9UBQ0 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
VPS29Q9UBQ0 SSR1P1-201ENST00000407630 814 ntBASIC5.49□□□□□ -1.53
VPS29Q9UBQ0 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC5.49□□□□□ -1.53
VPS29Q9UBQ0 AL357752.1-201ENST00000412817 349 ntBASIC5.49□□□□□ -1.53
VPS29Q9UBQ0 MRPL53P1-201ENST00000414323 319 ntBASIC5.49□□□□□ -1.53
VPS29Q9UBQ0 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.49□□□□□ -1.53
VPS29Q9UBQ0 NIFKP3-201ENST00000417799 865 ntBASIC5.49□□□□□ -1.53
VPS29Q9UBQ0 OR10T1P-201ENST00000424327 947 ntBASIC5.49□□□□□ -1.53
VPS29Q9UBQ0 GAPDHP48-201ENST00000436626 961 ntBASIC5.49□□□□□ -1.53
VPS29Q9UBQ0 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.49□□□□□ -1.53
VPS29Q9UBQ0 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.49□□□□□ -1.53
VPS29Q9UBQ0 RN7SL570P-201ENST00000484405 292 ntBASIC5.49□□□□□ -1.53
VPS29Q9UBQ0 DUTP1-201ENST00000493631 470 ntBASIC5.49□□□□□ -1.53
VPS29Q9UBQ0 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.49□□□□□ -1.53
VPS29Q9UBQ0 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.49□□□□□ -1.53
VPS29Q9UBQ0 AC139365.2-201ENST00000517972 253 ntBASIC5.49□□□□□ -1.53
VPS29Q9UBQ0 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.49□□□□□ -1.53
VPS29Q9UBQ0 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.49□□□□□ -1.53
VPS29Q9UBQ0 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.49□□□□□ -1.53
VPS29Q9UBQ0 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.49□□□□□ -1.53
VPS29Q9UBQ0 HMGN2P36-201ENST00000529541 409 ntBASIC5.49□□□□□ -1.53
VPS29Q9UBQ0 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC5.49□□□□□ -1.53
VPS29Q9UBQ0 AC137627.1-201ENST00000545761 289 ntBASIC5.49□□□□□ -1.53
VPS29Q9UBQ0 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.49□□□□□ -1.53
VPS29Q9UBQ0 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.49□□□□□ -1.53
VPS29Q9UBQ0 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.49□□□□□ -1.53
VPS29Q9UBQ0 AL583832.1-201ENST00000603227 784 ntBASIC5.49□□□□□ -1.53
VPS29Q9UBQ0 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
VPS29Q9UBQ0 AC073592.6-201ENST00000624271 415 ntBASIC5.49□□□□□ -1.53
VPS29Q9UBQ0 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
VPS29Q9UBQ0 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.49□□□□□ -1.53
VPS29Q9UBQ0 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
VPS29Q9UBQ0 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.49□□□□□ -1.53
VPS29Q9UBQ0 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
VPS29Q9UBQ0 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.49□□□□□ -1.53
VPS29Q9UBQ0 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
VPS29Q9UBQ0 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
VPS29Q9UBQ0 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VPS29Q9UBQ0 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
VPS29Q9UBQ0 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
VPS29Q9UBQ0 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VPS29Q9UBQ0 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC5.48□□□□□ -1.53
VPS29Q9UBQ0 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
VPS29Q9UBQ0 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.48□□□□□ -1.53
VPS29Q9UBQ0 RNA5SP273-201ENST00000362484 113 ntBASIC5.48□□□□□ -1.53
VPS29Q9UBQ0 RNA5SP453-201ENST00000362503 119 ntBASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms