Protein–RNA interactions for Protein: Q96RL7

VPS13A, Vacuolar protein sorting-associated protein 13A, humanhuman

Predictions only

Length 3,174 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13AQ96RL7 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.42□□□□□ -1.54
VPS13AQ96RL7 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
VPS13AQ96RL7 C4BPAP2-201ENST00000428434 478 ntBASIC5.42□□□□□ -1.54
VPS13AQ96RL7 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.42□□□□□ -1.54
VPS13AQ96RL7 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
VPS13AQ96RL7 AC004980.4-201ENST00000513375 203 ntBASIC5.42□□□□□ -1.54
VPS13AQ96RL7 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.42□□□□□ -1.54
VPS13AQ96RL7 AP002373.2-201ENST00000541631 1060 ntBASIC5.42□□□□□ -1.54
VPS13AQ96RL7 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.42□□□□□ -1.54
VPS13AQ96RL7 BNIP3P5-201ENST00000562290 498 ntBASIC5.42□□□□□ -1.54
VPS13AQ96RL7 AL391358.1-201ENST00000605342 190 ntBASIC5.42□□□□□ -1.54
VPS13AQ96RL7 AP3B1-201ENST00000255194 5838 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
VPS13AQ96RL7 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC5.42□□□□□ -1.54
VPS13AQ96RL7 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
VPS13AQ96RL7 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
VPS13AQ96RL7 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
VPS13AQ96RL7 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
VPS13AQ96RL7 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
VPS13AQ96RL7 ST3GAL1-201ENST00000399640 6764 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
VPS13AQ96RL7 GIGYF2-203ENST00000409451 5937 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
VPS13AQ96RL7 EGFR-201ENST00000275493 9821 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
VPS13AQ96RL7 C2CD3-202ENST00000334126 7960 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
VPS13AQ96RL7 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC5.42□□□□□ -1.54
VPS13AQ96RL7 MIR23B-201ENST00000384832 97 ntBASIC5.42□□□□□ -1.54
VPS13AQ96RL7 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
VPS13AQ96RL7 AL109766.1-201ENST00000555080 552 ntBASIC5.42□□□□□ -1.54
VPS13AQ96RL7 AL161637.1-201ENST00000622380 412 ntBASIC5.42□□□□□ -1.54
VPS13AQ96RL7 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
VPS13AQ96RL7 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
VPS13AQ96RL7 GPR63-201ENST00000229955 5952 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
VPS13AQ96RL7 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
VPS13AQ96RL7 ZNF658B-201ENST00000602828 3408 ntBASIC5.41□□□□□ -1.54
VPS13AQ96RL7 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
VPS13AQ96RL7 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.41□□□□□ -1.54
VPS13AQ96RL7 DSG3-201ENST00000257189 5525 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
VPS13AQ96RL7 MKI67-202ENST00000368654 12678 ntAPPRIS P3 TSL 2 BASIC5.41□□□□□ -1.54
VPS13AQ96RL7 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC5.41□□□□□ -1.54
VPS13AQ96RL7 RNU1-149P-201ENST00000390870 161 ntBASIC5.41□□□□□ -1.54
VPS13AQ96RL7 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.41□□□□□ -1.54
VPS13AQ96RL7 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.41□□□□□ -1.54
VPS13AQ96RL7 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.41□□□□□ -1.54
VPS13AQ96RL7 MIR4429-201ENST00000580105 73 ntBASIC5.41□□□□□ -1.54
VPS13AQ96RL7 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
VPS13AQ96RL7 WDR31-201ENST00000341761 4862 ntAPPRIS P3 TSL 5 BASIC5.41□□□□□ -1.54
VPS13AQ96RL7 WDR31-202ENST00000374193 4878 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
VPS13AQ96RL7 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
VPS13AQ96RL7 ADGRL3-213ENST00000509896 5069 ntTSL 5 BASIC5.41□□□□□ -1.54
VPS13AQ96RL7 ENAH-204ENST00000366844 13168 ntAPPRIS P4 TSL 1 (best) BASIC5.41□□□□□ -1.54
VPS13AQ96RL7 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
VPS13AQ96RL7 PRICKLE2-205ENST00000638394 9956 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
VPS13AQ96RL7 AC092070.2-203ENST00000598377 3644 ntBASIC5.41□□□□□ -1.54
VPS13AQ96RL7 PCSK1-201ENST00000311106 5086 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
VPS13AQ96RL7 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.41□□□□□ -1.54
VPS13AQ96RL7 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.41□□□□□ -1.54
VPS13AQ96RL7 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.41□□□□□ -1.54
VPS13AQ96RL7 SNORA37-201ENST00000384504 129 ntBASIC5.41□□□□□ -1.54
VPS13AQ96RL7 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC5.41□□□□□ -1.54
VPS13AQ96RL7 AC068287.1-201ENST00000430283 295 ntBASIC5.41□□□□□ -1.54
VPS13AQ96RL7 AC105399.1-202ENST00000447303 205 ntBASIC5.41□□□□□ -1.54
VPS13AQ96RL7 Z92846.1-201ENST00000456203 268 ntBASIC5.41□□□□□ -1.54
VPS13AQ96RL7 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC5.41□□□□□ -1.54
VPS13AQ96RL7 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.41□□□□□ -1.54
VPS13AQ96RL7 MIR2117-201ENST00000516780 80 ntBASIC5.41□□□□□ -1.54
VPS13AQ96RL7 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
VPS13AQ96RL7 AL627230.1-201ENST00000613077 211 ntBASIC5.41□□□□□ -1.54
VPS13AQ96RL7 AL591926.8-201ENST00000616876 211 ntBASIC5.41□□□□□ -1.54
VPS13AQ96RL7 IARS-213ENST00000627121 4587 ntTSL 5 BASIC5.41□□□□□ -1.54
VPS13AQ96RL7 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
VPS13AQ96RL7 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
VPS13AQ96RL7 CREB3L2-201ENST00000330387 7412 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
VPS13AQ96RL7 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
VPS13AQ96RL7 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC5.41□□□□□ -1.54
VPS13AQ96RL7 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC5.41□□□□□ -1.54
VPS13AQ96RL7 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
VPS13AQ96RL7 PBRM1-208ENST00000410007 4905 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
VPS13AQ96RL7 MYH2-201ENST00000245503 6339 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
VPS13AQ96RL7 RAB27B-201ENST00000262094 7281 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
VPS13AQ96RL7 GABRA4-201ENST00000264318 11973 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
VPS13AQ96RL7 U3.22-201ENST00000391120 215 ntBASIC5.41□□□□□ -1.54
VPS13AQ96RL7 UBE2V1P14-201ENST00000415815 558 ntBASIC5.41□□□□□ -1.54
VPS13AQ96RL7 AC009480.2-201ENST00000422916 432 ntBASIC5.41□□□□□ -1.54
VPS13AQ96RL7 DNAJA1P6-201ENST00000437347 354 ntBASIC5.41□□□□□ -1.54
VPS13AQ96RL7 RPL23AP40-201ENST00000487630 390 ntBASIC5.41□□□□□ -1.54
VPS13AQ96RL7 FTH1P8-201ENST00000498161 514 ntBASIC5.41□□□□□ -1.54
VPS13AQ96RL7 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC5.41□□□□□ -1.54
VPS13AQ96RL7 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
VPS13AQ96RL7 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.41□□□□□ -1.54
VPS13AQ96RL7 AC092653.1-201ENST00000608509 531 ntBASIC5.41□□□□□ -1.54
VPS13AQ96RL7 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.41□□□□□ -1.54
VPS13AQ96RL7 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.4□□□□□ -1.54
VPS13AQ96RL7 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.4□□□□□ -1.54
VPS13AQ96RL7 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
VPS13AQ96RL7 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
VPS13AQ96RL7 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.4□□□□□ -1.54
VPS13AQ96RL7 JADE1-203ENST00000452328 5544 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.54
VPS13AQ96RL7 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC5.4□□□□□ -1.54
VPS13AQ96RL7 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
VPS13AQ96RL7 CLNK-201ENST00000226951 5599 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
VPS13AQ96RL7 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.4□□□□□ -1.54
VPS13AQ96RL7 TEP1-201ENST00000262715 10695 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms