Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 RPS20P4-201ENST00000461659 355 ntBASIC8.58□□□□□ -1.04
LRCH3Q96II8 ACTR3P3-201ENST00000480448 893 ntBASIC8.58□□□□□ -1.04
LRCH3Q96II8 AC034232.2-201ENST00000511579 917 ntTSL 2 BASIC8.58□□□□□ -1.04
LRCH3Q96II8 LINC01438-201ENST00000512794 556 ntTSL 4 BASIC8.58□□□□□ -1.04
LRCH3Q96II8 ST3GAL3-237ENST00000533933 834 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
LRCH3Q96II8 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC8.58□□□□□ -1.04
LRCH3Q96II8 AC137768.1-201ENST00000549998 553 ntBASIC8.58□□□□□ -1.04
LRCH3Q96II8 AC005726.4-201ENST00000582858 458 ntBASIC8.58□□□□□ -1.04
LRCH3Q96II8 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC8.58□□□□□ -1.04
LRCH3Q96II8 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC8.58□□□□□ -1.04
LRCH3Q96II8 AP005137.2-201ENST00000609238 400 ntBASIC8.58□□□□□ -1.04
LRCH3Q96II8 RMST_3.1-201ENST00000611651 109 ntBASIC8.58□□□□□ -1.04
LRCH3Q96II8 MIR6885-201ENST00000612241 66 ntBASIC8.58□□□□□ -1.04
LRCH3Q96II8 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
LRCH3Q96II8 AL158206.1-201ENST00000563205 1965 ntBASIC8.58□□□□□ -1.04
LRCH3Q96II8 SLAMF7-203ENST00000368043 2689 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
LRCH3Q96II8 OR4P4-202ENST00000641760 2086 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
LRCH3Q96II8 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
LRCH3Q96II8 AC092681.2-201ENST00000565102 3044 ntTSL 2 BASIC8.58□□□□□ -1.04
LRCH3Q96II8 LINC02210-213ENST00000591271 9678 ntTSL 3 BASIC8.58□□□□□ -1.04
LRCH3Q96II8 RFX3-202ENST00000358730 2971 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
LRCH3Q96II8 TRIM60P19-201ENST00000452879 1462 ntBASIC8.57□□□□□ -1.04
LRCH3Q96II8 RNF41-212ENST00000615206 5216 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
LRCH3Q96II8 ZNF365-204ENST00000395251 2695 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
LRCH3Q96II8 XPO1-203ENST00000406957 3479 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
LRCH3Q96II8 CCDC149-204ENST00000504487 3869 ntAPPRIS ALT2 TSL 2 BASIC8.57□□□□□ -1.04
LRCH3Q96II8 MET-202ENST00000397752 6635 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
LRCH3Q96II8 BFAR-201ENST00000261658 3039 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
LRCH3Q96II8 CORIN-207ENST00000505909 3018 ntTSL 5 BASIC8.57□□□□□ -1.04
LRCH3Q96II8 CLDN16-201ENST00000264734 3273 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
LRCH3Q96II8 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC8.57□□□□□ -1.04
LRCH3Q96II8 NCOA4P2-201ENST00000340589 1813 ntBASIC8.57□□□□□ -1.04
LRCH3Q96II8 NUDT13-201ENST00000349051 1835 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
LRCH3Q96II8 TMEM236-201ENST00000377495 5464 ntAPPRIS P1 TSL 2 BASIC8.57□□□□□ -1.04
LRCH3Q96II8 RPS20-205ENST00000519807 1826 ntTSL 2 BASIC8.57□□□□□ -1.04
LRCH3Q96II8 AC093616.1-201ENST00000427434 2095 ntBASIC8.57□□□□□ -1.04
LRCH3Q96II8 OGDH-210ENST00000631326 4116 ntTSL 5 BASIC8.57□□□□□ -1.04
LRCH3Q96II8 SLC7A2-202ENST00000398090 7557 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
LRCH3Q96II8 DET1-202ENST00000444300 2154 ntTSL 5 BASIC8.57□□□□□ -1.04
LRCH3Q96II8 SLC12A1-203ENST00000396577 4708 ntAPPRIS ALT1 TSL 5 BASIC8.57□□□□□ -1.04
LRCH3Q96II8 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
LRCH3Q96II8 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
LRCH3Q96II8 RN7SKP48-201ENST00000365031 328 ntBASIC8.57□□□□□ -1.04
LRCH3Q96II8 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
LRCH3Q96II8 OR1N2-201ENST00000373688 1103 ntAPPRIS ALT2 BASIC8.57□□□□□ -1.04
LRCH3Q96II8 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
LRCH3Q96II8 U3.18-201ENST00000390880 216 ntBASIC8.57□□□□□ -1.04
LRCH3Q96II8 RPL5P18-201ENST00000406671 891 ntBASIC8.57□□□□□ -1.04
LRCH3Q96II8 RNU6-908P-201ENST00000410160 94 ntBASIC8.57□□□□□ -1.04
LRCH3Q96II8 Y_RNA.598-201ENST00000410480 95 ntBASIC8.57□□□□□ -1.04
LRCH3Q96II8 AC211486.3-201ENST00000412694 621 ntBASIC8.57□□□□□ -1.04
LRCH3Q96II8 PTP4A1P1-201ENST00000420539 515 ntBASIC8.57□□□□□ -1.04
LRCH3Q96II8 AL353678.1-201ENST00000422735 741 ntBASIC8.57□□□□□ -1.04
LRCH3Q96II8 AC093698.1-201ENST00000423843 571 ntBASIC8.57□□□□□ -1.04
LRCH3Q96II8 WWC3-AS1-201ENST00000430057 578 ntTSL 3 BASIC8.57□□□□□ -1.04
LRCH3Q96II8 PSMD10P2-201ENST00000432890 672 ntBASIC8.57□□□□□ -1.04
LRCH3Q96II8 HMGB1P45-201ENST00000435986 653 ntBASIC8.57□□□□□ -1.04
LRCH3Q96II8 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC8.57□□□□□ -1.04
LRCH3Q96II8 NQO1-204ENST00000439109 924 ntTSL 2 BASIC8.57□□□□□ -1.04
LRCH3Q96II8 RPL15P1-201ENST00000439981 600 ntBASIC8.57□□□□□ -1.04
LRCH3Q96II8 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
LRCH3Q96II8 AC144530.1-201ENST00000452862 555 ntBASIC8.57□□□□□ -1.04
LRCH3Q96II8 EIF4A2P4-201ENST00000458691 1196 ntBASIC8.57□□□□□ -1.04
LRCH3Q96II8 AL590326.1-201ENST00000460857 334 ntBASIC8.57□□□□□ -1.04
LRCH3Q96II8 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
LRCH3Q96II8 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC8.57□□□□□ -1.04
LRCH3Q96II8 RN7SL516P-201ENST00000496127 297 ntBASIC8.57□□□□□ -1.04
LRCH3Q96II8 AC093809.1-201ENST00000509155 340 ntBASIC8.57□□□□□ -1.04
LRCH3Q96II8 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC8.57□□□□□ -1.04
LRCH3Q96II8 AP000873.2-209ENST00000528083 547 ntTSL 4 BASIC8.57□□□□□ -1.04
LRCH3Q96II8 AC087276.1-201ENST00000529659 480 ntBASIC8.57□□□□□ -1.04
LRCH3Q96II8 YWHABP2-201ENST00000540201 713 ntBASIC8.57□□□□□ -1.04
LRCH3Q96II8 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC8.57□□□□□ -1.04
LRCH3Q96II8 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC8.57□□□□□ -1.04
LRCH3Q96II8 CHCHD3P2-201ENST00000550751 639 ntBASIC8.57□□□□□ -1.04
LRCH3Q96II8 AC010333.1-201ENST00000563116 563 ntTSL 4 BASIC8.57□□□□□ -1.04
LRCH3Q96II8 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC8.57□□□□□ -1.04
LRCH3Q96II8 AC091932.1-201ENST00000569381 427 ntBASIC8.57□□□□□ -1.04
LRCH3Q96II8 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC8.57□□□□□ -1.04
LRCH3Q96II8 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC8.57□□□□□ -1.04
LRCH3Q96II8 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC8.57□□□□□ -1.04
LRCH3Q96II8 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
LRCH3Q96II8 AC008638.3-201ENST00000603341 463 ntBASIC8.57□□□□□ -1.04
LRCH3Q96II8 AL136139.1-201ENST00000605568 222 ntBASIC8.57□□□□□ -1.04
LRCH3Q96II8 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC8.57□□□□□ -1.04
LRCH3Q96II8 Metazoa_SRP.29-201ENST00000616220 280 ntBASIC8.57□□□□□ -1.04
LRCH3Q96II8 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC8.57□□□□□ -1.04
LRCH3Q96II8 TEX46-203ENST00000622840 479 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
LRCH3Q96II8 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC8.57□□□□□ -1.04
LRCH3Q96II8 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
LRCH3Q96II8 CLDN2-203ENST00000541806 3150 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
LRCH3Q96II8 GABRB3-216ENST00000628124 5581 ntTSL 2 BASIC8.57□□□□□ -1.04
LRCH3Q96II8 TTC26-202ENST00000430935 4198 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
LRCH3Q96II8 SYTL4-204ENST00000372989 3885 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
LRCH3Q96II8 ZNF519P1-201ENST00000449011 1626 ntBASIC8.57□□□□□ -1.04
LRCH3Q96II8 MTND4P35-201ENST00000604257 1375 ntBASIC8.57□□□□□ -1.04
LRCH3Q96II8 MMP13-202ENST00000340273 1470 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
LRCH3Q96II8 MTND5P33-201ENST00000571250 1450 ntBASIC8.57□□□□□ -1.04
LRCH3Q96II8 RBBP5-202ENST00000367164 4290 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
LRCH3Q96II8 PPFIBP1-207ENST00000537927 5719 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms