Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC8.87□□□□□ -0.99
RC3H1Q5TC82 MTCO3P31-201ENST00000405526 789 ntBASIC8.87□□□□□ -0.99
RC3H1Q5TC82 AL139098.1-201ENST00000407291 389 ntBASIC8.87□□□□□ -0.99
RC3H1Q5TC82 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC8.87□□□□□ -0.99
RC3H1Q5TC82 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC8.87□□□□□ -0.99
RC3H1Q5TC82 UBTFL3-201ENST00000418934 1024 ntBASIC8.87□□□□□ -0.99
RC3H1Q5TC82 AF228730.4-201ENST00000421457 183 ntBASIC8.87□□□□□ -0.99
RC3H1Q5TC82 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC8.87□□□□□ -0.99
RC3H1Q5TC82 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC8.87□□□□□ -0.99
RC3H1Q5TC82 RPS10P21-201ENST00000430654 475 ntBASIC8.87□□□□□ -0.99
RC3H1Q5TC82 ARAFP2-201ENST00000440565 559 ntBASIC8.87□□□□□ -0.99
RC3H1Q5TC82 AL662791.1-201ENST00000441992 928 ntBASIC8.87□□□□□ -0.99
RC3H1Q5TC82 GAPDHP20-201ENST00000444107 1007 ntBASIC8.87□□□□□ -0.99
RC3H1Q5TC82 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC8.87□□□□□ -0.99
RC3H1Q5TC82 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC8.87□□□□□ -0.99
RC3H1Q5TC82 ANK3-207ENST00000460468 677 ntTSL 3 BASIC8.87□□□□□ -0.99
RC3H1Q5TC82 RN7SL379P-201ENST00000479912 293 ntBASIC8.87□□□□□ -0.99
RC3H1Q5TC82 AC015864.1-201ENST00000496512 544 ntBASIC8.87□□□□□ -0.99
RC3H1Q5TC82 AC106872.4-201ENST00000510050 523 ntBASIC8.87□□□□□ -0.99
RC3H1Q5TC82 AC096741.2-201ENST00000510225 637 ntTSL 5 BASIC8.87□□□□□ -0.99
RC3H1Q5TC82 FABP5P6-201ENST00000510588 409 ntBASIC8.87□□□□□ -0.99
RC3H1Q5TC82 RNU6-875P-201ENST00000516488 106 ntBASIC8.87□□□□□ -0.99
RC3H1Q5TC82 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC8.87□□□□□ -0.99
RC3H1Q5TC82 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC8.87□□□□□ -0.99
RC3H1Q5TC82 TOMM20P1-201ENST00000534518 427 ntBASIC8.87□□□□□ -0.99
RC3H1Q5TC82 AC005519.1-201ENST00000554490 601 ntBASIC8.87□□□□□ -0.99
RC3H1Q5TC82 UBE2CP1-201ENST00000557130 554 ntBASIC8.87□□□□□ -0.99
RC3H1Q5TC82 AC026826.3-201ENST00000561747 158 ntBASIC8.87□□□□□ -0.99
RC3H1Q5TC82 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC8.87□□□□□ -0.99
RC3H1Q5TC82 CASC16-202ENST00000563844 610 ntTSL 3 BASIC8.87□□□□□ -0.99
RC3H1Q5TC82 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC8.87□□□□□ -0.99
RC3H1Q5TC82 RN7SL230P-201ENST00000580835 303 ntBASIC8.87□□□□□ -0.99
RC3H1Q5TC82 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC8.87□□□□□ -0.99
RC3H1Q5TC82 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC8.87□□□□□ -0.99
RC3H1Q5TC82 WISP1-OT1-201ENST00000602893 642 ntBASIC8.87□□□□□ -0.99
RC3H1Q5TC82 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC8.87□□□□□ -0.99
RC3H1Q5TC82 MIR6861-201ENST00000618657 64 ntBASIC8.87□□□□□ -0.99
RC3H1Q5TC82 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC8.87□□□□□ -0.99
RC3H1Q5TC82 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC8.87□□□□□ -0.99
RC3H1Q5TC82 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC8.87□□□□□ -0.99
RC3H1Q5TC82 OR8G3P-202ENST00000641572 1255 ntBASIC8.87□□□□□ -0.99
RC3H1Q5TC82 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC8.87□□□□□ -0.99
RC3H1Q5TC82 KIAA1024-201ENST00000305428 6732 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
RC3H1Q5TC82 NEDD4L-204ENST00000382850 8251 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
RC3H1Q5TC82 SSPO-201ENST00000378016 15589 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
RC3H1Q5TC82 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC8.87□□□□□ -0.99
RC3H1Q5TC82 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
RC3H1Q5TC82 AC087565.3-202ENST00000642085 1603 ntBASIC8.87□□□□□ -0.99
RC3H1Q5TC82 FAM13A-AS1-202ENST00000511543 2453 ntTSL 2 BASIC8.87□□□□□ -0.99
RC3H1Q5TC82 AOX2P-204ENST00000487742 3284 ntBASIC8.86□□□□□ -0.99
RC3H1Q5TC82 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
RC3H1Q5TC82 GPM6A-202ENST00000393658 2821 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
RC3H1Q5TC82 OR51E2-201ENST00000396950 2781 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
RC3H1Q5TC82 BRD8-203ENST00000402931 2982 ntTSL 5 BASIC8.86□□□□□ -0.99
RC3H1Q5TC82 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
RC3H1Q5TC82 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
RC3H1Q5TC82 AC114776.1-201ENST00000414159 4395 ntTSL 5 BASIC8.86□□□□□ -0.99
RC3H1Q5TC82 BBOX1-204ENST00000528583 1724 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
RC3H1Q5TC82 KCNMB2-201ENST00000358316 2271 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
RC3H1Q5TC82 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC8.86□□□□□ -0.99
RC3H1Q5TC82 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
RC3H1Q5TC82 OR51A10P-201ENST00000307165 937 ntBASIC8.86□□□□□ -0.99
RC3H1Q5TC82 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
RC3H1Q5TC82 AL672167.1-206ENST00000356293 943 ntBASIC8.86□□□□□ -0.99
RC3H1Q5TC82 Y_RNA.162-201ENST00000363683 102 ntBASIC8.86□□□□□ -0.99
RC3H1Q5TC82 Y_RNA.535-201ENST00000384612 99 ntBASIC8.86□□□□□ -0.99
RC3H1Q5TC82 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
RC3H1Q5TC82 RNU6-796P-201ENST00000391086 107 ntBASIC8.86□□□□□ -0.99
RC3H1Q5TC82 Z86062.1-201ENST00000406773 777 ntBASIC8.86□□□□□ -0.99
RC3H1Q5TC82 TATDN1P1-201ENST00000414123 891 ntBASIC8.86□□□□□ -0.99
RC3H1Q5TC82 LINC00222-203ENST00000416890 602 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
RC3H1Q5TC82 AL139158.1-201ENST00000424719 340 ntBASIC8.86□□□□□ -0.99
RC3H1Q5TC82 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
RC3H1Q5TC82 EIF5AP4-201ENST00000441206 465 ntBASIC8.86□□□□□ -0.99
RC3H1Q5TC82 RPL6P30-201ENST00000443382 862 ntBASIC8.86□□□□□ -0.99
RC3H1Q5TC82 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC8.86□□□□□ -0.99
RC3H1Q5TC82 OR2A3P-201ENST00000493774 953 ntBASIC8.86□□□□□ -0.99
RC3H1Q5TC82 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC8.86□□□□□ -0.99
RC3H1Q5TC82 AC021146.7-201ENST00000509604 775 ntBASIC8.86□□□□□ -0.99
RC3H1Q5TC82 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC8.86□□□□□ -0.99
RC3H1Q5TC82 RNU6-1153P-201ENST00000516760 105 ntBASIC8.86□□□□□ -0.99
RC3H1Q5TC82 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC8.86□□□□□ -0.99
RC3H1Q5TC82 AC104417.1-201ENST00000523974 751 ntBASIC8.86□□□□□ -0.99
RC3H1Q5TC82 AP005597.2-201ENST00000526238 341 ntBASIC8.86□□□□□ -0.99
RC3H1Q5TC82 AC007068.2-201ENST00000543168 395 ntBASIC8.86□□□□□ -0.99
RC3H1Q5TC82 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC8.86□□□□□ -0.99
RC3H1Q5TC82 AC002519.2-203ENST00000567043 837 ntBASIC8.86□□□□□ -0.99
RC3H1Q5TC82 ACTG1P15-201ENST00000570019 1063 ntBASIC8.86□□□□□ -0.99
RC3H1Q5TC82 ISCA1P3-201ENST00000577104 373 ntBASIC8.86□□□□□ -0.99
RC3H1Q5TC82 MIR4999-201ENST00000585029 91 ntBASIC8.86□□□□□ -0.99
RC3H1Q5TC82 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC8.86□□□□□ -0.99
RC3H1Q5TC82 TEX41-218ENST00000596540 882 ntTSL 5 BASIC8.86□□□□□ -0.99
RC3H1Q5TC82 HNRNPA3P9-201ENST00000604913 979 ntBASIC8.86□□□□□ -0.99
RC3H1Q5TC82 AL390208.1-201ENST00000605885 644 ntBASIC8.86□□□□□ -0.99
RC3H1Q5TC82 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC8.86□□□□□ -0.99
RC3H1Q5TC82 AC004241.2-201ENST00000614562 444 ntBASIC8.86□□□□□ -0.99
RC3H1Q5TC82 AC009704.2-201ENST00000618739 483 ntBASIC8.86□□□□□ -0.99
RC3H1Q5TC82 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC8.86□□□□□ -0.99
RC3H1Q5TC82 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
RC3H1Q5TC82 SAMMSON-214ENST00000641395 1264 ntBASIC8.86□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms