Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC7.05□□□□□ -1.28
ERVFC1P60507 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC7.05□□□□□ -1.28
ERVFC1P60507 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
ERVFC1P60507 AMBN-203ENST00000613447 1997 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
ERVFC1P60507 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
ERVFC1P60507 DYNC1I2P1-201ENST00000435916 1838 ntBASIC7.05□□□□□ -1.28
ERVFC1P60507 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
ERVFC1P60507 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
ERVFC1P60507 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
ERVFC1P60507 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC7.05□□□□□ -1.28
ERVFC1P60507 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
ERVFC1P60507 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
ERVFC1P60507 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
ERVFC1P60507 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
ERVFC1P60507 HNRNPA1P54-201ENST00000411857 9714 ntBASIC7.05□□□□□ -1.28
ERVFC1P60507 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
ERVFC1P60507 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
ERVFC1P60507 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
ERVFC1P60507 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC7.04□□□□□ -1.28
ERVFC1P60507 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
ERVFC1P60507 NPL-212ENST00000614468 2376 ntTSL 5 BASIC7.04□□□□□ -1.28
ERVFC1P60507 AL590542.1-201ENST00000449314 1596 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
ERVFC1P60507 AC005614.1-201ENST00000598952 3653 ntBASIC7.04□□□□□ -1.28
ERVFC1P60507 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
ERVFC1P60507 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC7.04□□□□□ -1.28
ERVFC1P60507 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
ERVFC1P60507 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
ERVFC1P60507 SMG1P5-202ENST00000529428 4219 ntBASIC7.04□□□□□ -1.28
ERVFC1P60507 SMG1P2-201ENST00000566127 4221 ntBASIC7.04□□□□□ -1.28
ERVFC1P60507 TMEM75-201ENST00000624314 2165 ntBASIC7.04□□□□□ -1.28
ERVFC1P60507 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
ERVFC1P60507 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
ERVFC1P60507 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
ERVFC1P60507 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
ERVFC1P60507 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC7.04□□□□□ -1.28
ERVFC1P60507 PRELID1P2-201ENST00000407805 396 ntBASIC7.04□□□□□ -1.28
ERVFC1P60507 SNORA11B-201ENST00000408175 129 ntBASIC7.04□□□□□ -1.28
ERVFC1P60507 RNU4-22P-201ENST00000411058 166 ntBASIC7.04□□□□□ -1.28
ERVFC1P60507 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC7.04□□□□□ -1.28
ERVFC1P60507 AC017035.1-201ENST00000411999 1115 ntBASIC7.04□□□□□ -1.28
ERVFC1P60507 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC7.04□□□□□ -1.28
ERVFC1P60507 P2RY10P2-201ENST00000416730 913 ntBASIC7.04□□□□□ -1.28
ERVFC1P60507 AL929472.1-201ENST00000417484 429 ntBASIC7.04□□□□□ -1.28
ERVFC1P60507 AL354707.3-201ENST00000427308 331 ntBASIC7.04□□□□□ -1.28
ERVFC1P60507 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC7.04□□□□□ -1.28
ERVFC1P60507 RPSAP65-201ENST00000429660 595 ntBASIC7.04□□□□□ -1.28
ERVFC1P60507 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC7.04□□□□□ -1.28
ERVFC1P60507 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC7.04□□□□□ -1.28
ERVFC1P60507 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC7.04□□□□□ -1.28
ERVFC1P60507 SULT1D1P-201ENST00000458020 882 ntBASIC7.04□□□□□ -1.28
ERVFC1P60507 RN7SL254P-201ENST00000460609 284 ntBASIC7.04□□□□□ -1.28
ERVFC1P60507 AC092691.2-201ENST00000461787 803 ntBASIC7.04□□□□□ -1.28
ERVFC1P60507 RN7SL221P-201ENST00000466190 281 ntBASIC7.04□□□□□ -1.28
ERVFC1P60507 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC7.04□□□□□ -1.28
ERVFC1P60507 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
ERVFC1P60507 SNX18P25-201ENST00000510539 758 ntBASIC7.04□□□□□ -1.28
ERVFC1P60507 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC7.04□□□□□ -1.28
ERVFC1P60507 AL133399.1-201ENST00000527476 298 ntBASIC7.04□□□□□ -1.28
ERVFC1P60507 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC7.04□□□□□ -1.28
ERVFC1P60507 MYL2-203ENST00000548438 664 ntTSL 3 BASIC7.04□□□□□ -1.28
ERVFC1P60507 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC7.04□□□□□ -1.28
ERVFC1P60507 AC090826.1-203ENST00000569235 490 ntBASIC7.04□□□□□ -1.28
ERVFC1P60507 ZNF415P1-201ENST00000582279 1166 ntBASIC7.04□□□□□ -1.28
ERVFC1P60507 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC7.04□□□□□ -1.28
ERVFC1P60507 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC7.04□□□□□ -1.28
ERVFC1P60507 AC016727.1-205ENST00000605437 569 ntBASIC7.04□□□□□ -1.28
ERVFC1P60507 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC7.04□□□□□ -1.28
ERVFC1P60507 AC068944.2-201ENST00000610373 403 ntBASIC7.04□□□□□ -1.28
ERVFC1P60507 AC092794.1-201ENST00000612734 582 ntBASIC7.04□□□□□ -1.28
ERVFC1P60507 AC026951.2-201ENST00000613847 241 ntBASIC7.04□□□□□ -1.28
ERVFC1P60507 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC7.04□□□□□ -1.28
ERVFC1P60507 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC7.04□□□□□ -1.28
ERVFC1P60507 AL357140.4-201ENST00000636827 412 ntBASIC7.04□□□□□ -1.28
ERVFC1P60507 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC7.04□□□□□ -1.28
ERVFC1P60507 AL596275.2-203ENST00000641951 371 ntBASIC7.04□□□□□ -1.28
ERVFC1P60507 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
ERVFC1P60507 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC7.04□□□□□ -1.28
ERVFC1P60507 AC099654.3-201ENST00000447087 1546 ntBASIC7.04□□□□□ -1.28
ERVFC1P60507 KARSP3-201ENST00000571212 1504 ntBASIC7.04□□□□□ -1.28
ERVFC1P60507 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
ERVFC1P60507 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC7.04□□□□□ -1.28
ERVFC1P60507 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
ERVFC1P60507 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC7.04□□□□□ -1.28
ERVFC1P60507 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
ERVFC1P60507 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
ERVFC1P60507 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
ERVFC1P60507 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
ERVFC1P60507 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
ERVFC1P60507 TLR10-202ENST00000361424 3484 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
ERVFC1P60507 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC7.04□□□□□ -1.28
ERVFC1P60507 AC020978.6-201ENST00000571197 3177 ntBASIC7.04□□□□□ -1.28
ERVFC1P60507 RSRC1-203ENST00000464171 2411 ntTSL 5 BASIC7.03□□□□□ -1.28
ERVFC1P60507 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
ERVFC1P60507 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC7.03□□□□□ -1.28
ERVFC1P60507 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC7.03□□□□□ -1.28
ERVFC1P60507 AL117339.4-201ENST00000608335 7063 ntBASIC7.03□□□□□ -1.28
ERVFC1P60507 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
ERVFC1P60507 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC7.03□□□□□ -1.28
ERVFC1P60507 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
ERVFC1P60507 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms