Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.89□□□□□ -1.47
TRIM23P36406 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC5.89□□□□□ -1.47
TRIM23P36406 AC104843.2-201ENST00000427666 297 ntBASIC5.89□□□□□ -1.47
TRIM23P36406 MTND6P12-201ENST00000428247 522 ntBASIC5.89□□□□□ -1.47
TRIM23P36406 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.89□□□□□ -1.47
TRIM23P36406 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.89□□□□□ -1.47
TRIM23P36406 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.89□□□□□ -1.47
TRIM23P36406 AC008945.1-201ENST00000505144 499 ntBASIC5.89□□□□□ -1.47
TRIM23P36406 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.89□□□□□ -1.47
TRIM23P36406 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.89□□□□□ -1.47
TRIM23P36406 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.89□□□□□ -1.47
TRIM23P36406 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.89□□□□□ -1.47
TRIM23P36406 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.89□□□□□ -1.47
TRIM23P36406 ZNF322P1-201ENST00000568013 1209 ntBASIC5.89□□□□□ -1.47
TRIM23P36406 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.89□□□□□ -1.47
TRIM23P36406 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.89□□□□□ -1.47
TRIM23P36406 AL161912.3-201ENST00000605404 628 ntBASIC5.89□□□□□ -1.47
TRIM23P36406 AC145423.1-201ENST00000605712 336 ntBASIC5.89□□□□□ -1.47
TRIM23P36406 Z95327.3-201ENST00000610385 572 ntBASIC5.89□□□□□ -1.47
TRIM23P36406 AL021918.2-201ENST00000613415 194 ntBASIC5.89□□□□□ -1.47
TRIM23P36406 AC026124.2-201ENST00000621847 656 ntBASIC5.89□□□□□ -1.47
TRIM23P36406 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.89□□□□□ -1.47
TRIM23P36406 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
TRIM23P36406 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.89□□□□□ -1.47
TRIM23P36406 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
TRIM23P36406 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
TRIM23P36406 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
TRIM23P36406 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
TRIM23P36406 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.89□□□□□ -1.47
TRIM23P36406 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
TRIM23P36406 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
TRIM23P36406 AC007842.1-201ENST00000597336 2039 ntBASIC5.89□□□□□ -1.47
TRIM23P36406 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
TRIM23P36406 MSL3P1-202ENST00000440028 1468 ntBASIC5.89□□□□□ -1.47
TRIM23P36406 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
TRIM23P36406 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC5.89□□□□□ -1.47
TRIM23P36406 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TRIM23P36406 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
TRIM23P36406 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC5.88□□□□□ -1.47
TRIM23P36406 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC5.88□□□□□ -1.47
TRIM23P36406 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.88□□□□□ -1.47
TRIM23P36406 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.88□□□□□ -1.47
TRIM23P36406 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.88□□□□□ -1.47
TRIM23P36406 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TRIM23P36406 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
TRIM23P36406 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TRIM23P36406 RNA5SP510-201ENST00000364697 99 ntBASIC5.88□□□□□ -1.47
TRIM23P36406 AL031985.1-201ENST00000392713 418 ntBASIC5.88□□□□□ -1.47
TRIM23P36406 RPS3AP2-201ENST00000407190 754 ntBASIC5.88□□□□□ -1.47
TRIM23P36406 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC5.88□□□□□ -1.47
TRIM23P36406 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.88□□□□□ -1.47
TRIM23P36406 AC099677.3-201ENST00000427081 395 ntBASIC5.88□□□□□ -1.47
TRIM23P36406 BX323845.3-201ENST00000428215 527 ntBASIC5.88□□□□□ -1.47
TRIM23P36406 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.88□□□□□ -1.47
TRIM23P36406 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.88□□□□□ -1.47
TRIM23P36406 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TRIM23P36406 AL445665.1-202ENST00000452436 324 ntBASIC5.88□□□□□ -1.47
TRIM23P36406 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.88□□□□□ -1.47
TRIM23P36406 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.88□□□□□ -1.47
TRIM23P36406 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.88□□□□□ -1.47
TRIM23P36406 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
TRIM23P36406 IGKV3D-34-201ENST00000522638 302 ntBASIC5.88□□□□□ -1.47
TRIM23P36406 OR4A42P-201ENST00000531397 938 ntBASIC5.88□□□□□ -1.47
TRIM23P36406 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC5.88□□□□□ -1.47
TRIM23P36406 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
TRIM23P36406 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.88□□□□□ -1.47
TRIM23P36406 AC004890.3-201ENST00000605566 1095 ntBASIC5.88□□□□□ -1.47
TRIM23P36406 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC5.88□□□□□ -1.47
TRIM23P36406 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.88□□□□□ -1.47
TRIM23P36406 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
TRIM23P36406 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TRIM23P36406 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.88□□□□□ -1.47
TRIM23P36406 OR8G3P-202ENST00000641572 1255 ntBASIC5.88□□□□□ -1.47
TRIM23P36406 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TRIM23P36406 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.88□□□□□ -1.47
TRIM23P36406 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
TRIM23P36406 PDZK1P1-202ENST00000425209 1350 ntBASIC5.88□□□□□ -1.47
TRIM23P36406 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TRIM23P36406 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TRIM23P36406 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TRIM23P36406 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.88□□□□□ -1.47
TRIM23P36406 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TRIM23P36406 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
TRIM23P36406 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.87□□□□□ -1.47
TRIM23P36406 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
TRIM23P36406 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.87□□□□□ -1.47
TRIM23P36406 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
TRIM23P36406 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
TRIM23P36406 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
TRIM23P36406 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
TRIM23P36406 RNA5SP435-201ENST00000364044 108 ntBASIC5.87□□□□□ -1.47
TRIM23P36406 RNA5SP500-201ENST00000364486 119 ntBASIC5.87□□□□□ -1.47
TRIM23P36406 RNA5SP211-201ENST00000365516 117 ntBASIC5.87□□□□□ -1.47
TRIM23P36406 RN7SKP292-201ENST00000365522 317 ntBASIC5.87□□□□□ -1.47
TRIM23P36406 RN7SKP269-201ENST00000365545 319 ntBASIC5.87□□□□□ -1.47
TRIM23P36406 RNA5SP284-201ENST00000384547 118 ntBASIC5.87□□□□□ -1.47
TRIM23P36406 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
TRIM23P36406 EEF1B2P8-201ENST00000414101 671 ntBASIC5.87□□□□□ -1.47
TRIM23P36406 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.87□□□□□ -1.47
TRIM23P36406 AC015977.1-201ENST00000418887 292 ntBASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 156 ms