Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 SS18L2P2-201ENST00000583960 235 ntBASIC3.41□□□□□ -1.86
APOBP04114 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
APOBP04114 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
APOBP04114 CHFR-201ENST00000266880 11133 ntTSL 2 BASIC3.41□□□□□ -1.86
APOBP04114 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
APOBP04114 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
APOBP04114 SPTAN1-202ENST00000372731 7889 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
APOBP04114 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC3.41□□□□□ -1.86
APOBP04114 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
APOBP04114 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC3.41□□□□□ -1.86
APOBP04114 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
APOBP04114 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
APOBP04114 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
APOBP04114 AL590065.1-201ENST00000603371 4774 ntBASIC3.41□□□□□ -1.86
APOBP04114 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
APOBP04114 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
APOBP04114 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
APOBP04114 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC3.41□□□□□ -1.86
APOBP04114 NAIP-204ENST00000503719 5347 ntTSL 5 BASIC3.41□□□□□ -1.86
APOBP04114 SLC26A9-202ENST00000367134 4616 ntTSL 5 BASIC3.41□□□□□ -1.86
APOBP04114 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
APOBP04114 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC3.41□□□□□ -1.86
APOBP04114 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC3.41□□□□□ -1.86
APOBP04114 CDC27P1-201ENST00000445384 715 ntBASIC3.41□□□□□ -1.86
APOBP04114 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
APOBP04114 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC3.41□□□□□ -1.86
APOBP04114 TOMM22P4-201ENST00000511318 336 ntBASIC3.41□□□□□ -1.86
APOBP04114 IGHVIII-13-1-201ENST00000517613 291 ntBASIC3.41□□□□□ -1.86
APOBP04114 SSX9-202ENST00000608568 580 ntTSL 4 BASIC3.41□□□□□ -1.86
APOBP04114 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC3.41□□□□□ -1.86
APOBP04114 FAM168A-201ENST00000064778 7296 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
APOBP04114 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC3.41□□□□□ -1.86
APOBP04114 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
APOBP04114 DIP2C-202ENST00000381496 7749 ntTSL 5 BASIC3.41□□□□□ -1.86
APOBP04114 FCRL5-201ENST00000361835 5390 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
APOBP04114 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
APOBP04114 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
APOBP04114 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
APOBP04114 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
APOBP04114 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC3.41□□□□□ -1.86
APOBP04114 PCNPP1-201ENST00000552501 511 ntBASIC3.41□□□□□ -1.86
APOBP04114 MIR4715-201ENST00000584117 79 ntBASIC3.41□□□□□ -1.86
APOBP04114 AL031320.1-201ENST00000604177 357 ntBASIC3.41□□□□□ -1.86
APOBP04114 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
APOBP04114 AC010435.1-201ENST00000623353 1177 ntBASIC3.41□□□□□ -1.86
APOBP04114 SPEN-201ENST00000375759 12232 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
APOBP04114 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
APOBP04114 MLLT3-203ENST00000380338 6772 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
APOBP04114 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
APOBP04114 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC3.41□□□□□ -1.86
APOBP04114 MTAP-201ENST00000380172 6122 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
APOBP04114 GRIP1-201ENST00000359742 5216 ntTSL 5 BASIC3.41□□□□□ -1.86
APOBP04114 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC3.41□□□□□ -1.86
APOBP04114 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
APOBP04114 AL034546.1-201ENST00000623740 3693 ntBASIC3.41□□□□□ -1.86
APOBP04114 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
APOBP04114 XIAP-202ENST00000371199 8591 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
APOBP04114 ALB-219ENST00000621085 1418 ntTSL 5 BASIC3.41□□□□□ -1.86
APOBP04114 PARN-201ENST00000341484 2100 ntTSL 2 BASIC3.41□□□□□ -1.86
APOBP04114 DDX24-209ENST00000621632 5612 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
APOBP04114 TRANK1-201ENST00000429976 10481 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
APOBP04114 MIR23B-201ENST00000384832 97 ntBASIC3.41□□□□□ -1.86
APOBP04114 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC3.41□□□□□ -1.86
APOBP04114 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.41□□□□□ -1.86
APOBP04114 KNOP1P3-201ENST00000446933 426 ntBASIC3.41□□□□□ -1.86
APOBP04114 BZW1P1-201ENST00000454901 1240 ntBASIC3.41□□□□□ -1.86
APOBP04114 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC3.41□□□□□ -1.86
APOBP04114 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC3.41□□□□□ -1.86
APOBP04114 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
APOBP04114 RPL23AP72-201ENST00000492447 435 ntBASIC3.41□□□□□ -1.86
APOBP04114 EIF3KP3-201ENST00000514461 639 ntBASIC3.41□□□□□ -1.86
APOBP04114 AP002981.1-201ENST00000517692 975 ntBASIC3.41□□□□□ -1.86
APOBP04114 KCTD9P4-201ENST00000526766 1166 ntBASIC3.41□□□□□ -1.86
APOBP04114 TOMM20P2-201ENST00000540082 421 ntBASIC3.41□□□□□ -1.86
APOBP04114 UBE2FP2-201ENST00000566646 462 ntBASIC3.41□□□□□ -1.86
APOBP04114 MIR4691-201ENST00000583764 85 ntBASIC3.41□□□□□ -1.86
APOBP04114 AL356752.1-201ENST00000615844 593 ntBASIC3.41□□□□□ -1.86
APOBP04114 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC3.41□□□□□ -1.86
APOBP04114 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
APOBP04114 NEK1-208ENST00000512193 4430 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
APOBP04114 C2orf71-201ENST00000331664 7044 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
APOBP04114 AC009962.1-201ENST00000567327 3813 ntBASIC3.4□□□□□ -1.86
APOBP04114 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC3.4□□□□□ -1.86
APOBP04114 TAF1-204ENST00000423759 7722 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
APOBP04114 AL031123.3-201ENST00000623345 1837 ntBASIC3.4□□□□□ -1.86
APOBP04114 PAN2-221ENST00000610546 5301 ntAPPRIS ALT1 TSL 5 BASIC3.4□□□□□ -1.86
APOBP04114 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC3.4□□□□□ -1.86
APOBP04114 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
APOBP04114 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC3.4□□□□□ -1.86
APOBP04114 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
APOBP04114 SNORA11C-201ENST00000408532 129 ntBASIC3.4□□□□□ -1.86
APOBP04114 NPM1P40-201ENST00000412758 733 ntBASIC3.4□□□□□ -1.86
APOBP04114 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC3.4□□□□□ -1.86
APOBP04114 CT45A11P-201ENST00000448043 1134 ntBASIC3.4□□□□□ -1.86
APOBP04114 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC3.4□□□□□ -1.86
APOBP04114 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC3.4□□□□□ -1.86
APOBP04114 AC021678.3-201ENST00000517893 476 ntBASIC3.4□□□□□ -1.86
APOBP04114 RN7SL690P-201ENST00000582087 240 ntBASIC3.4□□□□□ -1.86
APOBP04114 CYCSP1-201ENST00000604815 315 ntBASIC3.4□□□□□ -1.86
APOBP04114 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC3.4□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms