Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 HUS1-201ENST00000258774 2935 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
PDGFAP04085 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
PDGFAP04085 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC7.16□□□□□ -1.26
PDGFAP04085 LRRC28-201ENST00000301981 5971 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
PDGFAP04085 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC7.16□□□□□ -1.26
PDGFAP04085 CAGE1-208ENST00000512086 2537 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
PDGFAP04085 AC036108.4-201ENST00000611654 2516 ntBASIC7.16□□□□□ -1.26
PDGFAP04085 RNU5D-1-201ENST00000363299 116 ntBASIC7.16□□□□□ -1.26
PDGFAP04085 RNU5F-7P-201ENST00000363696 115 ntBASIC7.16□□□□□ -1.26
PDGFAP04085 RNU6-374P-201ENST00000364146 108 ntBASIC7.16□□□□□ -1.26
PDGFAP04085 RNU4-7P-201ENST00000364758 141 ntBASIC7.16□□□□□ -1.26
PDGFAP04085 RNA5SP79-201ENST00000365193 109 ntBASIC7.16□□□□□ -1.26
PDGFAP04085 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
PDGFAP04085 RAET1G-201ENST00000367360 1107 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
PDGFAP04085 MGST3-202ENST00000367884 716 ntAPPRIS P1 TSL 3 BASIC7.16□□□□□ -1.26
PDGFAP04085 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
PDGFAP04085 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC7.16□□□□□ -1.26
PDGFAP04085 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
PDGFAP04085 RN7SKP56-201ENST00000410513 331 ntBASIC7.16□□□□□ -1.26
PDGFAP04085 RNU2-42P-201ENST00000410697 113 ntBASIC7.16□□□□□ -1.26
PDGFAP04085 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC7.16□□□□□ -1.26
PDGFAP04085 RPL21P32-201ENST00000419877 477 ntBASIC7.16□□□□□ -1.26
PDGFAP04085 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC7.16□□□□□ -1.26
PDGFAP04085 AC112492.2-201ENST00000432774 1030 ntBASIC7.16□□□□□ -1.26
PDGFAP04085 AC105052.2-201ENST00000434317 794 ntBASIC7.16□□□□□ -1.26
PDGFAP04085 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC7.16□□□□□ -1.26
PDGFAP04085 AL512882.1-201ENST00000436086 832 ntBASIC7.16□□□□□ -1.26
PDGFAP04085 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC7.16□□□□□ -1.26
PDGFAP04085 EPS15P1-201ENST00000448836 336 ntBASIC7.16□□□□□ -1.26
PDGFAP04085 MIR4422HG-201ENST00000451250 638 ntTSL 3 BASIC7.16□□□□□ -1.26
PDGFAP04085 MTND2P24-201ENST00000453434 806 ntBASIC7.16□□□□□ -1.26
PDGFAP04085 BX248409.1-201ENST00000455497 255 ntBASIC7.16□□□□□ -1.26
PDGFAP04085 AC009269.1-202ENST00000484381 469 ntBASIC7.16□□□□□ -1.26
PDGFAP04085 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC7.16□□□□□ -1.26
PDGFAP04085 KRT19P6-201ENST00000510983 209 ntBASIC7.16□□□□□ -1.26
PDGFAP04085 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC7.16□□□□□ -1.26
PDGFAP04085 MTHFD2P4-201ENST00000515074 1025 ntBASIC7.16□□□□□ -1.26
PDGFAP04085 AC097103.2-205ENST00000515247 567 ntTSL 4 BASIC7.16□□□□□ -1.26
PDGFAP04085 AC109635.6-201ENST00000525487 1113 ntBASIC7.16□□□□□ -1.26
PDGFAP04085 BCAS2P1-201ENST00000528022 632 ntBASIC7.16□□□□□ -1.26
PDGFAP04085 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC7.16□□□□□ -1.26
PDGFAP04085 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC7.16□□□□□ -1.26
PDGFAP04085 LINC00640-201ENST00000554409 498 ntTSL 3 BASIC7.16□□□□□ -1.26
PDGFAP04085 AL121579.1-201ENST00000555129 305 ntBASIC7.16□□□□□ -1.26
PDGFAP04085 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC7.16□□□□□ -1.26
PDGFAP04085 PCMTD1P2-201ENST00000565017 355 ntBASIC7.16□□□□□ -1.26
PDGFAP04085 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC7.16□□□□□ -1.26
PDGFAP04085 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC7.16□□□□□ -1.26
PDGFAP04085 AC087623.4-201ENST00000606593 695 ntBASIC7.16□□□□□ -1.26
PDGFAP04085 AC091965.4-201ENST00000607691 587 ntBASIC7.16□□□□□ -1.26
PDGFAP04085 AC000068.3-201ENST00000607934 427 ntBASIC7.16□□□□□ -1.26
PDGFAP04085 AC006566.1-201ENST00000608943 513 ntBASIC7.16□□□□□ -1.26
PDGFAP04085 MILR1-202ENST00000612535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
PDGFAP04085 XPNPEP3-206ENST00000614001 230 ntTSL 5 BASIC7.16□□□□□ -1.26
PDGFAP04085 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
PDGFAP04085 AL109954.1-201ENST00000619495 557 ntTSL 4 BASIC7.16□□□□□ -1.26
PDGFAP04085 AL121985.2-201ENST00000621192 555 ntBASIC7.16□□□□□ -1.26
PDGFAP04085 ZNF793-208ENST00000588578 4549 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
PDGFAP04085 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
PDGFAP04085 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC7.16□□□□□ -1.26
PDGFAP04085 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
PDGFAP04085 KCNMB3-205ENST00000485523 7246 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
PDGFAP04085 KCNN3-201ENST00000271915 13033 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
PDGFAP04085 TMEM75-201ENST00000624314 2165 ntBASIC7.16□□□□□ -1.26
PDGFAP04085 ZFX-201ENST00000304543 2996 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
PDGFAP04085 MTCO1P23-201ENST00000415223 1526 ntBASIC7.16□□□□□ -1.26
PDGFAP04085 SLC16A1P1-201ENST00000486743 1510 ntBASIC7.16□□□□□ -1.26
PDGFAP04085 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
PDGFAP04085 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
PDGFAP04085 LINC00689-203ENST00000438049 3946 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
PDGFAP04085 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC7.16□□□□□ -1.26
PDGFAP04085 GOLGA6L6-201ENST00000619213 4013 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
PDGFAP04085 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC7.16□□□□□ -1.26
PDGFAP04085 APBB2-224ENST00000513140 4166 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
PDGFAP04085 FAM13A-201ENST00000264344 5858 ntAPPRIS P2 TSL 5 BASIC7.16□□□□□ -1.26
PDGFAP04085 ZNF182-201ENST00000376943 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
PDGFAP04085 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
PDGFAP04085 ALPK1-201ENST00000177648 4537 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.26
PDGFAP04085 CCDC129-205ENST00000451887 3611 ntAPPRIS ALT2 TSL 2 BASIC7.15□□□□□ -1.26
PDGFAP04085 SMAD5-AS1-201ENST00000297163 1816 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
PDGFAP04085 MTRF1-202ENST00000379477 1948 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.26
PDGFAP04085 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
PDGFAP04085 ZMYM2-202ENST00000382871 5051 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
PDGFAP04085 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
PDGFAP04085 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
PDGFAP04085 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.26
PDGFAP04085 TMBIM6-209ENST00000547798 2494 ntAPPRIS ALT2 TSL 2 BASIC7.15□□□□□ -1.26
PDGFAP04085 OR9G4-201ENST00000302957 984 ntBASIC7.15□□□□□ -1.26
PDGFAP04085 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC7.15□□□□□ -1.26
PDGFAP04085 FAM204BP-201ENST00000369171 701 ntBASIC7.15□□□□□ -1.26
PDGFAP04085 ESD-201ENST00000378697 1079 ntTSL 5 BASIC7.15□□□□□ -1.26
PDGFAP04085 RNU6-532P-201ENST00000384318 107 ntBASIC7.15□□□□□ -1.26
PDGFAP04085 AL161909.1-201ENST00000397390 712 ntBASIC7.15□□□□□ -1.26
PDGFAP04085 AL137058.2-203ENST00000398039 825 ntTSL 3 BASIC7.15□□□□□ -1.26
PDGFAP04085 AGR3-202ENST00000402239 563 ntTSL 2 BASIC7.15□□□□□ -1.26
PDGFAP04085 IGBP1-AS2-201ENST00000403371 513 ntTSL 3 BASIC7.15□□□□□ -1.26
PDGFAP04085 AL355375.1-201ENST00000405686 392 ntBASIC7.15□□□□□ -1.26
PDGFAP04085 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC7.15□□□□□ -1.26
PDGFAP04085 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC7.15□□□□□ -1.26
PDGFAP04085 POLR1B-204ENST00000417433 3836 ntTSL 2 BASIC7.15□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms