Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 AL080317.1-201ENST00000444259 557 ntTSL 2 BASIC5.88□□□□□ -1.47
PAX4O43316 AC010240.2-201ENST00000445363 1205 ntBASIC5.88□□□□□ -1.47
PAX4O43316 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC5.88□□□□□ -1.47
PAX4O43316 SAP18P3-201ENST00000449663 396 ntBASIC5.88□□□□□ -1.47
PAX4O43316 RPSAP64-201ENST00000451820 336 ntBASIC5.88□□□□□ -1.47
PAX4O43316 AL356310.1-201ENST00000452024 585 ntTSL 3 BASIC5.88□□□□□ -1.47
PAX4O43316 TMEM97P1-201ENST00000452969 451 ntBASIC5.88□□□□□ -1.47
PAX4O43316 NDUFB11P1-201ENST00000455818 465 ntBASIC5.88□□□□□ -1.47
PAX4O43316 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC5.88□□□□□ -1.47
PAX4O43316 ARPC3P2-201ENST00000457786 533 ntBASIC5.88□□□□□ -1.47
PAX4O43316 AC126615.1-201ENST00000470084 630 ntBASIC5.88□□□□□ -1.47
PAX4O43316 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC5.88□□□□□ -1.47
PAX4O43316 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC5.88□□□□□ -1.47
PAX4O43316 KLF7P1-201ENST00000490941 1048 ntBASIC5.88□□□□□ -1.47
PAX4O43316 HNRNPA1P44-201ENST00000503999 879 ntBASIC5.88□□□□□ -1.47
PAX4O43316 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC5.88□□□□□ -1.47
PAX4O43316 AC106798.1-202ENST00000506819 589 ntTSL 4 BASIC5.88□□□□□ -1.47
PAX4O43316 AC026412.2-201ENST00000512270 1075 ntBASIC5.88□□□□□ -1.47
PAX4O43316 RN7SKP256-201ENST00000517201 314 ntBASIC5.88□□□□□ -1.47
PAX4O43316 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC5.88□□□□□ -1.47
PAX4O43316 IGLVI-68-201ENST00000519525 345 ntBASIC5.88□□□□□ -1.47
PAX4O43316 IGKV2D-14-201ENST00000522473 355 ntBASIC5.88□□□□□ -1.47
PAX4O43316 BRD9P1-201ENST00000529855 560 ntBASIC5.88□□□□□ -1.47
PAX4O43316 OR4C7P-201ENST00000533375 919 ntBASIC5.88□□□□□ -1.47
PAX4O43316 AC073913.2-201ENST00000541512 145 ntBASIC5.88□□□□□ -1.47
PAX4O43316 AC048383.1-201ENST00000558226 527 ntTSL 4 BASIC5.88□□□□□ -1.47
PAX4O43316 AC025198.1-201ENST00000578331 419 ntBASIC5.88□□□□□ -1.47
PAX4O43316 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC5.88□□□□□ -1.47
PAX4O43316 MIR4450-201ENST00000583589 65 ntBASIC5.88□□□□□ -1.47
PAX4O43316 LINC01515-207ENST00000598092 496 ntTSL 3 BASIC5.88□□□□□ -1.47
PAX4O43316 AC006262.2-201ENST00000599127 612 ntTSL 3 BASIC5.88□□□□□ -1.47
PAX4O43316 AC005261.1-201ENST00000601567 712 ntTSL 2 BASIC5.88□□□□□ -1.47
PAX4O43316 AC113554.1-201ENST00000606284 490 ntBASIC5.88□□□□□ -1.47
PAX4O43316 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC5.88□□□□□ -1.47
PAX4O43316 AC243773.3-201ENST00000613270 256 ntBASIC5.88□□□□□ -1.47
PAX4O43316 Metazoa_SRP.115-201ENST00000619303 284 ntBASIC5.88□□□□□ -1.47
PAX4O43316 AC091953.4-201ENST00000625179 341 ntBASIC5.88□□□□□ -1.47
PAX4O43316 LPAR6-202ENST00000378434 3004 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PAX4O43316 BTF3L4-202ENST00000472944 2159 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PAX4O43316 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PAX4O43316 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.88□□□□□ -1.47
PAX4O43316 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC5.88□□□□□ -1.47
PAX4O43316 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PAX4O43316 AL161725.1-201ENST00000591577 1351 ntTSL 5 BASIC5.88□□□□□ -1.47
PAX4O43316 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
PAX4O43316 MOSPD1-203ENST00000370783 2364 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
PAX4O43316 AL157895.1-201ENST00000451713 1404 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PAX4O43316 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PAX4O43316 RASSF5-209ENST00000636182 3427 ntTSL 5 BASIC5.88□□□□□ -1.47
PAX4O43316 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
PAX4O43316 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
PAX4O43316 PHKB-201ENST00000299167 5464 ntTSL 5 BASIC5.88□□□□□ -1.47
PAX4O43316 CACNB2-201ENST00000282343 3524 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PAX4O43316 PARP15-201ENST00000310366 1518 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PAX4O43316 CLDN12-201ENST00000287916 3565 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PAX4O43316 FSD1L-202ENST00000374710 7664 ntTSL 2 BASIC5.88□□□□□ -1.47
PAX4O43316 RECQL-203ENST00000421138 2572 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PAX4O43316 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC5.88□□□□□ -1.47
PAX4O43316 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
PAX4O43316 LRP6-206ENST00000543091 4774 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PAX4O43316 BDNF-206ENST00000395983 3776 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PAX4O43316 NLRP5-201ENST00000390649 3888 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
PAX4O43316 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PAX4O43316 CD36-221ENST00000534394 1741 ntTSL 2 BASIC5.88□□□□□ -1.47
PAX4O43316 CWF19L1-201ENST00000354105 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PAX4O43316 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC5.88□□□□□ -1.47
PAX4O43316 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
PAX4O43316 LINC00506-203ENST00000629295 4300 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PAX4O43316 FCGR3A-201ENST00000367967 2086 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
PAX4O43316 TEFM-204ENST00000580840 2109 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PAX4O43316 AC010533.1-201ENST00000624875 2105 ntBASIC5.87□□□□□ -1.47
PAX4O43316 KIT-201ENST00000288135 5186 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
PAX4O43316 SLC3A1-204ENST00000409380 2424 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PAX4O43316 PPP6R3-206ENST00000524904 4292 ntAPPRIS ALT1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PAX4O43316 AC139256.1-201ENST00000569858 2598 ntTSL 2 BASIC5.87□□□□□ -1.47
PAX4O43316 BRCC3-203ENST00000369459 2641 ntTSL 5 BASIC5.87□□□□□ -1.47
PAX4O43316 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
PAX4O43316 ZNF544-201ENST00000269829 3547 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
PAX4O43316 MAP1LC3C-201ENST00000357246 1182 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PAX4O43316 Y_RNA.148-201ENST00000363557 117 ntBASIC5.87□□□□□ -1.47
PAX4O43316 RNA5SP336-201ENST00000364189 117 ntBASIC5.87□□□□□ -1.47
PAX4O43316 LEMD1-201ENST00000367149 604 ntTSL 3 BASIC5.87□□□□□ -1.47
PAX4O43316 ENSA-209ENST00000369016 923 ntTSL 5 BASIC5.87□□□□□ -1.47
PAX4O43316 SNORD65C-201ENST00000390962 71 ntBASIC5.87□□□□□ -1.47
PAX4O43316 LEMD1-206ENST00000391936 727 ntTSL 5 BASIC5.87□□□□□ -1.47
PAX4O43316 FCRL6-204ENST00000392235 947 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PAX4O43316 AC093719.1-202ENST00000392735 373 ntBASIC5.87□□□□□ -1.47
PAX4O43316 AL592114.1-201ENST00000403842 483 ntBASIC5.87□□□□□ -1.47
PAX4O43316 MIR1184-2-201ENST00000408263 99 ntBASIC5.87□□□□□ -1.47
PAX4O43316 MIR1184-1-201ENST00000408606 99 ntBASIC5.87□□□□□ -1.47
PAX4O43316 MIR1184-3-201ENST00000408676 99 ntBASIC5.87□□□□□ -1.47
PAX4O43316 SRSF7-202ENST00000409276 1050 ntTSL 5 BASIC5.87□□□□□ -1.47
PAX4O43316 GHRHR-204ENST00000409316 1292 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PAX4O43316 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PAX4O43316 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC5.87□□□□□ -1.47
PAX4O43316 MRPL50P2-201ENST00000416821 482 ntBASIC5.87□□□□□ -1.47
PAX4O43316 LINC00426-202ENST00000417079 1045 ntTSL 3 BASIC5.87□□□□□ -1.47
PAX4O43316 RPS27AP14-201ENST00000422868 454 ntBASIC5.87□□□□□ -1.47
PAX4O43316 MTCO3P46-201ENST00000425787 232 ntBASIC5.87□□□□□ -1.47
PAX4O43316 DNAJC19P7-201ENST00000428811 344 ntBASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms