Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC7.42□□□□□ -1.22
SOX1O00570 LINC01974-201ENST00000575126 494 ntTSL 3 BASIC7.42□□□□□ -1.22
SOX1O00570 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC7.42□□□□□ -1.22
SOX1O00570 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC7.42□□□□□ -1.22
SOX1O00570 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC7.42□□□□□ -1.22
SOX1O00570 AC006967.3-201ENST00000594086 1093 ntBASIC7.42□□□□□ -1.22
SOX1O00570 VN1R83P-201ENST00000595685 445 ntBASIC7.42□□□□□ -1.22
SOX1O00570 TEX41-218ENST00000596540 882 ntTSL 5 BASIC7.42□□□□□ -1.22
SOX1O00570 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC7.42□□□□□ -1.22
SOX1O00570 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC7.42□□□□□ -1.22
SOX1O00570 AC010333.3-201ENST00000615100 402 ntBASIC7.42□□□□□ -1.22
SOX1O00570 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC7.42□□□□□ -1.22
SOX1O00570 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC7.42□□□□□ -1.22
SOX1O00570 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC7.42□□□□□ -1.22
SOX1O00570 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SOX1O00570 WDR76-201ENST00000263795 3978 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
SOX1O00570 GPM6B-205ENST00000454189 3957 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SOX1O00570 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC7.42□□□□□ -1.22
SOX1O00570 PRICKLE2-AS3-201ENST00000473434 2496 ntTSL 2 BASIC7.42□□□□□ -1.22
SOX1O00570 CCNB2-205ENST00000621385 2503 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SOX1O00570 AL158152.1-201ENST00000602652 1435 ntBASIC7.42□□□□□ -1.22
SOX1O00570 ZNF833P-201ENST00000424938 1494 ntBASIC7.42□□□□□ -1.22
SOX1O00570 EFCAB1-201ENST00000262103 2051 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SOX1O00570 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
SOX1O00570 NLRP9P1-201ENST00000540920 2655 ntBASIC7.42□□□□□ -1.22
SOX1O00570 IQCA1-204ENST00000409907 3281 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
SOX1O00570 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
SOX1O00570 NUDT13-202ENST00000357321 2102 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
SOX1O00570 PTP4A2-218ENST00000602725 3353 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SOX1O00570 AC004947.1-201ENST00000420912 2781 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SOX1O00570 AQP4-AS1-202ENST00000578701 2177 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SOX1O00570 PPFIA2-201ENST00000333447 5517 ntTSL 5 BASIC7.41□□□□□ -1.22
SOX1O00570 SCARB2-211ENST00000638603 4284 ntTSL 5 BASIC7.41□□□□□ -1.22
SOX1O00570 CCDC73-203ENST00000531481 4381 ntAPPRIS ALT2 TSL 2 BASIC7.41□□□□□ -1.22
SOX1O00570 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SOX1O00570 ZNF814-201ENST00000435989 3146 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
SOX1O00570 CAST-236ENST00000511782 2466 ntAPPRIS ALT2 TSL 2 BASIC7.41□□□□□ -1.22
SOX1O00570 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
SOX1O00570 FAM114A1-201ENST00000358869 4050 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SOX1O00570 SORBS2-221ENST00000437304 3381 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SOX1O00570 AC000099.1-202ENST00000413812 1912 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SOX1O00570 ACO1-201ENST00000309951 7466 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SOX1O00570 ZNF670-ZNF695-202ENST00000474541 2751 ntAPPRIS ALT2 TSL 2 BASIC7.41□□□□□ -1.22
SOX1O00570 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC7.41□□□□□ -1.22
SOX1O00570 USP3-201ENST00000268049 5311 ntTSL 5 BASIC7.41□□□□□ -1.22
SOX1O00570 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
SOX1O00570 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SOX1O00570 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
SOX1O00570 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
SOX1O00570 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SOX1O00570 Y_RNA.88-201ENST00000363029 99 ntBASIC7.41□□□□□ -1.22
SOX1O00570 U3.28-201ENST00000391249 210 ntBASIC7.41□□□□□ -1.22
SOX1O00570 BRD7-202ENST00000394689 2145 ntAPPRIS ALT1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SOX1O00570 GSTA12P-201ENST00000402398 508 ntBASIC7.41□□□□□ -1.22
SOX1O00570 NPM1P22-201ENST00000427761 952 ntBASIC7.41□□□□□ -1.22
SOX1O00570 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC7.41□□□□□ -1.22
SOX1O00570 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC7.41□□□□□ -1.22
SOX1O00570 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC7.41□□□□□ -1.22
SOX1O00570 AL591503.2-201ENST00000442314 1005 ntBASIC7.41□□□□□ -1.22
SOX1O00570 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC7.41□□□□□ -1.22
SOX1O00570 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC7.41□□□□□ -1.22
SOX1O00570 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC7.41□□□□□ -1.22
SOX1O00570 ELOCP23-201ENST00000452014 332 ntBASIC7.41□□□□□ -1.22
SOX1O00570 SUN3-208ENST00000453192 801 ntTSL 5 BASIC7.41□□□□□ -1.22
SOX1O00570 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC7.41□□□□□ -1.22
SOX1O00570 AC027673.1-201ENST00000456245 405 ntBASIC7.41□□□□□ -1.22
SOX1O00570 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC7.41□□□□□ -1.22
SOX1O00570 AC093627.1-201ENST00000465755 877 ntTSL 3 BASIC7.41□□□□□ -1.22
SOX1O00570 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC7.41□□□□□ -1.22
SOX1O00570 AC105918.1-201ENST00000474399 838 ntBASIC7.41□□□□□ -1.22
SOX1O00570 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SOX1O00570 RPL9P33-201ENST00000484311 566 ntBASIC7.41□□□□□ -1.22
SOX1O00570 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC7.41□□□□□ -1.22
SOX1O00570 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC7.41□□□□□ -1.22
SOX1O00570 OR7E157P-201ENST00000494376 911 ntBASIC7.41□□□□□ -1.22
SOX1O00570 AC079921.2-201ENST00000507579 455 ntTSL 3 BASIC7.41□□□□□ -1.22
SOX1O00570 AC021146.7-201ENST00000509604 775 ntBASIC7.41□□□□□ -1.22
SOX1O00570 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SOX1O00570 AC022447.1-201ENST00000515358 464 ntBASIC7.41□□□□□ -1.22
SOX1O00570 SEPT10P1-201ENST00000517342 1162 ntBASIC7.41□□□□□ -1.22
SOX1O00570 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC7.41□□□□□ -1.22
SOX1O00570 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC7.41□□□□□ -1.22
SOX1O00570 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC7.41□□□□□ -1.22
SOX1O00570 CASC16-202ENST00000563844 610 ntTSL 3 BASIC7.41□□□□□ -1.22
SOX1O00570 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC7.41□□□□□ -1.22
SOX1O00570 SKA2-203ENST00000578105 689 ntTSL 2 BASIC7.41□□□□□ -1.22
SOX1O00570 MIR4999-201ENST00000585029 91 ntBASIC7.41□□□□□ -1.22
SOX1O00570 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC7.41□□□□□ -1.22
SOX1O00570 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
SOX1O00570 HRH1-201ENST00000397056 4711 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SOX1O00570 NEDD1-201ENST00000266742 4046 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
SOX1O00570 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC7.41□□□□□ -1.22
SOX1O00570 AP001157.1-201ENST00000550837 2339 ntBASIC7.41□□□□□ -1.22
SOX1O00570 C9orf131-201ENST00000312292 3409 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
SOX1O00570 AC018765.1-201ENST00000623357 3446 ntBASIC7.41□□□□□ -1.22
SOX1O00570 MAPK10-280ENST00000641166 2684 ntAPPRIS ALT1 BASIC7.41□□□□□ -1.22
SOX1O00570 ARHGAP24-202ENST00000395183 2740 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SOX1O00570 RAB11A-201ENST00000261890 4930 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SOX1O00570 TRIM53BP-201ENST00000532912 1720 ntBASIC7.41□□□□□ -1.22
SOX1O00570 C7-201ENST00000313164 4257 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms