Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
DDX39AO00148 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
DDX39AO00148 AC092642.1-201ENST00000392417 425 ntBASIC6.55□□□□□ -1.36
DDX39AO00148 RNA5SP178-201ENST00000410380 128 ntBASIC6.55□□□□□ -1.36
DDX39AO00148 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC6.55□□□□□ -1.36
DDX39AO00148 GAPDHP48-201ENST00000436626 961 ntBASIC6.55□□□□□ -1.36
DDX39AO00148 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC6.55□□□□□ -1.36
DDX39AO00148 NXT1P1-201ENST00000458481 316 ntBASIC6.55□□□□□ -1.36
DDX39AO00148 RN7SL101P-201ENST00000496350 279 ntBASIC6.55□□□□□ -1.36
DDX39AO00148 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
DDX39AO00148 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.55□□□□□ -1.36
DDX39AO00148 CYCSP22-201ENST00000517555 339 ntBASIC6.55□□□□□ -1.36
DDX39AO00148 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.55□□□□□ -1.36
DDX39AO00148 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.55□□□□□ -1.36
DDX39AO00148 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
DDX39AO00148 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.55□□□□□ -1.36
DDX39AO00148 AC244502.2-201ENST00000543361 851 ntBASIC6.55□□□□□ -1.36
DDX39AO00148 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
DDX39AO00148 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.55□□□□□ -1.36
DDX39AO00148 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC6.55□□□□□ -1.36
DDX39AO00148 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
DDX39AO00148 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC6.55□□□□□ -1.36
DDX39AO00148 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC6.55□□□□□ -1.36
DDX39AO00148 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.55□□□□□ -1.36
DDX39AO00148 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.55□□□□□ -1.36
DDX39AO00148 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.55□□□□□ -1.36
DDX39AO00148 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
DDX39AO00148 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
DDX39AO00148 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
DDX39AO00148 CASC19-255ENST00000641733 1385 ntBASIC6.55□□□□□ -1.36
DDX39AO00148 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
DDX39AO00148 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
DDX39AO00148 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
DDX39AO00148 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
DDX39AO00148 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.54□□□□□ -1.36
DDX39AO00148 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
DDX39AO00148 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
DDX39AO00148 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.54□□□□□ -1.36
DDX39AO00148 FBXL21-201ENST00000297158 1305 ntBASIC6.54□□□□□ -1.36
DDX39AO00148 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
DDX39AO00148 TEK-202ENST00000406359 3935 ntTSL 2 BASIC6.54□□□□□ -1.36
DDX39AO00148 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
DDX39AO00148 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
DDX39AO00148 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
DDX39AO00148 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
DDX39AO00148 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
DDX39AO00148 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
DDX39AO00148 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
DDX39AO00148 RNA5SP242-201ENST00000364171 118 ntBASIC6.54□□□□□ -1.36
DDX39AO00148 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC6.54□□□□□ -1.36
DDX39AO00148 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
DDX39AO00148 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC6.54□□□□□ -1.36
DDX39AO00148 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC6.54□□□□□ -1.36
DDX39AO00148 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6.54□□□□□ -1.36
DDX39AO00148 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC6.54□□□□□ -1.36
DDX39AO00148 AC004129.2-201ENST00000457229 287 ntBASIC6.54□□□□□ -1.36
DDX39AO00148 RPSAP37-201ENST00000470913 821 ntBASIC6.54□□□□□ -1.36
DDX39AO00148 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.54□□□□□ -1.36
DDX39AO00148 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC6.54□□□□□ -1.36
DDX39AO00148 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC6.54□□□□□ -1.36
DDX39AO00148 GOLGA5P1-201ENST00000507317 980 ntBASIC6.54□□□□□ -1.36
DDX39AO00148 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.54□□□□□ -1.36
DDX39AO00148 AC020978.7-201ENST00000575953 1187 ntBASIC6.54□□□□□ -1.36
DDX39AO00148 AP001496.3-201ENST00000580230 913 ntBASIC6.54□□□□□ -1.36
DDX39AO00148 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.54□□□□□ -1.36
DDX39AO00148 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC6.54□□□□□ -1.36
DDX39AO00148 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC6.54□□□□□ -1.36
DDX39AO00148 RN7SL544P-201ENST00000617232 284 ntBASIC6.54□□□□□ -1.36
DDX39AO00148 RN7SL763P-201ENST00000620922 284 ntBASIC6.54□□□□□ -1.36
DDX39AO00148 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
DDX39AO00148 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
DDX39AO00148 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
DDX39AO00148 AC241584.2-201ENST00000637142 2090 ntBASIC6.54□□□□□ -1.36
DDX39AO00148 AL137141.1-201ENST00000624622 4836 ntBASIC6.54□□□□□ -1.36
DDX39AO00148 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
DDX39AO00148 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
DDX39AO00148 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
DDX39AO00148 AC007842.1-201ENST00000597336 2039 ntBASIC6.54□□□□□ -1.36
DDX39AO00148 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.53□□□□□ -1.36
DDX39AO00148 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
DDX39AO00148 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
DDX39AO00148 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
DDX39AO00148 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
DDX39AO00148 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
DDX39AO00148 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.53□□□□□ -1.36
DDX39AO00148 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
DDX39AO00148 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
DDX39AO00148 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
DDX39AO00148 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
DDX39AO00148 SNORA64.1-201ENST00000362600 132 ntBASIC6.53□□□□□ -1.36
DDX39AO00148 MIR323B-201ENST00000385269 82 ntBASIC6.53□□□□□ -1.36
DDX39AO00148 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
DDX39AO00148 AL121835.1-201ENST00000404250 354 ntBASIC6.53□□□□□ -1.36
DDX39AO00148 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.53□□□□□ -1.36
DDX39AO00148 AL512422.1-201ENST00000407033 553 ntBASIC6.53□□□□□ -1.36
DDX39AO00148 RN7SKP286-201ENST00000410894 299 ntBASIC6.53□□□□□ -1.36
DDX39AO00148 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.53□□□□□ -1.36
DDX39AO00148 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC6.53□□□□□ -1.36
DDX39AO00148 AL662874.1-201ENST00000426065 230 ntBASIC6.53□□□□□ -1.36
DDX39AO00148 AC244033.1-201ENST00000426826 870 ntBASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms