Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC8.51□□□□□ -1.05
SHANK2Q9UPX8 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC8.51□□□□□ -1.05
SHANK2Q9UPX8 CASC22-201ENST00000569713 386 ntTSL 5 BASIC8.51□□□□□ -1.05
SHANK2Q9UPX8 AC100827.5-201ENST00000615883 426 ntBASIC8.51□□□□□ -1.05
SHANK2Q9UPX8 AC136428.4-201ENST00000634254 1155 ntBASIC8.51□□□□□ -1.05
SHANK2Q9UPX8 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC8.51□□□□□ -1.05
SHANK2Q9UPX8 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC8.51□□□□□ -1.05
SHANK2Q9UPX8 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
SHANK2Q9UPX8 MAK-202ENST00000354489 3941 ntTSL 5 BASIC8.51□□□□□ -1.05
SHANK2Q9UPX8 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
SHANK2Q9UPX8 AC092070.2-203ENST00000598377 3644 ntBASIC8.51□□□□□ -1.05
SHANK2Q9UPX8 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
SHANK2Q9UPX8 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC8.51□□□□□ -1.05
SHANK2Q9UPX8 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
SHANK2Q9UPX8 CFAP54-202ENST00000524981 9766 ntAPPRIS P2 TSL 5 BASIC8.51□□□□□ -1.05
SHANK2Q9UPX8 PCBP1-AS1-230ENST00000439670 2180 ntTSL 2 BASIC8.51□□□□□ -1.05
SHANK2Q9UPX8 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC8.51□□□□□ -1.05
SHANK2Q9UPX8 LIG3-202ENST00000378526 8400 ntAPPRIS P4 TSL 1 (best) BASIC8.51□□□□□ -1.05
SHANK2Q9UPX8 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC8.51□□□□□ -1.05
SHANK2Q9UPX8 AC009948.3-201ENST00000603415 1798 ntBASIC8.51□□□□□ -1.05
SHANK2Q9UPX8 AL109941.1-201ENST00000401925 229 ntBASIC8.51□□□□□ -1.05
SHANK2Q9UPX8 AL589647.1-201ENST00000402485 466 ntBASIC8.51□□□□□ -1.05
SHANK2Q9UPX8 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC8.51□□□□□ -1.05
SHANK2Q9UPX8 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC8.51□□□□□ -1.05
SHANK2Q9UPX8 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
SHANK2Q9UPX8 TOMM22P4-201ENST00000511318 336 ntBASIC8.51□□□□□ -1.05
SHANK2Q9UPX8 AP000676.2-201ENST00000529711 301 ntBASIC8.51□□□□□ -1.05
SHANK2Q9UPX8 AC126177.5-201ENST00000549599 178 ntBASIC8.51□□□□□ -1.05
SHANK2Q9UPX8 AC007346.2-201ENST00000564816 892 ntBASIC8.51□□□□□ -1.05
SHANK2Q9UPX8 AC133644.2-201ENST00000608142 540 ntBASIC8.51□□□□□ -1.05
SHANK2Q9UPX8 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
SHANK2Q9UPX8 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
SHANK2Q9UPX8 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
SHANK2Q9UPX8 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
SHANK2Q9UPX8 PLAGL1-205ENST00000392307 6296 ntTSL 2 BASIC8.5□□□□□ -1.05
SHANK2Q9UPX8 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC8.5□□□□□ -1.05
SHANK2Q9UPX8 EEF1A1P30-201ENST00000429708 1315 ntBASIC8.5□□□□□ -1.05
SHANK2Q9UPX8 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC8.5□□□□□ -1.05
SHANK2Q9UPX8 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
SHANK2Q9UPX8 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC8.5□□□□□ -1.05
SHANK2Q9UPX8 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC8.5□□□□□ -1.05
SHANK2Q9UPX8 MIR133B-201ENST00000362210 119 ntBASIC8.5□□□□□ -1.05
SHANK2Q9UPX8 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC8.5□□□□□ -1.05
SHANK2Q9UPX8 SSX3-202ENST00000376893 800 ntTSL 2 BASIC8.5□□□□□ -1.05
SHANK2Q9UPX8 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC8.5□□□□□ -1.05
SHANK2Q9UPX8 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC8.5□□□□□ -1.05
SHANK2Q9UPX8 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC8.5□□□□□ -1.05
SHANK2Q9UPX8 GYG1P1-201ENST00000460864 698 ntBASIC8.5□□□□□ -1.05
SHANK2Q9UPX8 IGLV3-24-201ENST00000517477 197 ntBASIC8.5□□□□□ -1.05
SHANK2Q9UPX8 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC8.5□□□□□ -1.05
SHANK2Q9UPX8 OR1F2P-201ENST00000570470 933 ntBASIC8.5□□□□□ -1.05
SHANK2Q9UPX8 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC8.5□□□□□ -1.05
SHANK2Q9UPX8 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC8.5□□□□□ -1.05
SHANK2Q9UPX8 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC8.5□□□□□ -1.05
SHANK2Q9UPX8 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
SHANK2Q9UPX8 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
SHANK2Q9UPX8 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
SHANK2Q9UPX8 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC8.5□□□□□ -1.05
SHANK2Q9UPX8 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
SHANK2Q9UPX8 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC8.5□□□□□ -1.05
SHANK2Q9UPX8 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC8.5□□□□□ -1.05
SHANK2Q9UPX8 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC8.49□□□□□ -1.05
SHANK2Q9UPX8 AL034549.2-201ENST00000618285 3373 ntBASIC8.49□□□□□ -1.05
SHANK2Q9UPX8 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
SHANK2Q9UPX8 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
SHANK2Q9UPX8 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC8.49□□□□□ -1.05
SHANK2Q9UPX8 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
SHANK2Q9UPX8 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC8.49□□□□□ -1.05
SHANK2Q9UPX8 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
SHANK2Q9UPX8 ALB-209ENST00000503124 1741 ntTSL 5 BASIC8.49□□□□□ -1.05
SHANK2Q9UPX8 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
SHANK2Q9UPX8 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
SHANK2Q9UPX8 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
SHANK2Q9UPX8 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
SHANK2Q9UPX8 AC009804.1-201ENST00000400949 179 ntBASIC8.49□□□□□ -1.05
SHANK2Q9UPX8 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC8.49□□□□□ -1.05
SHANK2Q9UPX8 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC8.49□□□□□ -1.05
SHANK2Q9UPX8 RPS4XP1-201ENST00000482189 787 ntBASIC8.49□□□□□ -1.05
SHANK2Q9UPX8 DUTP1-201ENST00000493631 470 ntBASIC8.49□□□□□ -1.05
SHANK2Q9UPX8 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC8.49□□□□□ -1.05
SHANK2Q9UPX8 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC8.49□□□□□ -1.05
SHANK2Q9UPX8 AC027667.1-201ENST00000545814 304 ntBASIC8.49□□□□□ -1.05
SHANK2Q9UPX8 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC8.49□□□□□ -1.05
SHANK2Q9UPX8 DPPA3P2-202ENST00000557188 1219 ntBASIC8.49□□□□□ -1.05
SHANK2Q9UPX8 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC8.49□□□□□ -1.05
SHANK2Q9UPX8 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC8.49□□□□□ -1.05
SHANK2Q9UPX8 NANOGP3-201ENST00000605855 286 ntBASIC8.49□□□□□ -1.05
SHANK2Q9UPX8 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC8.49□□□□□ -1.05
SHANK2Q9UPX8 uc_338.18-201ENST00000615451 175 ntBASIC8.49□□□□□ -1.05
SHANK2Q9UPX8 AC090607.5-201ENST00000615692 224 ntBASIC8.49□□□□□ -1.05
SHANK2Q9UPX8 HNRNPA1P54-201ENST00000411857 9714 ntBASIC8.49□□□□□ -1.05
SHANK2Q9UPX8 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC8.49□□□□□ -1.05
SHANK2Q9UPX8 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
SHANK2Q9UPX8 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC8.48□□□□□ -1.05
SHANK2Q9UPX8 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
SHANK2Q9UPX8 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
SHANK2Q9UPX8 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC8.48□□□□□ -1.05
SHANK2Q9UPX8 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
SHANK2Q9UPX8 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC8.48□□□□□ -1.05
SHANK2Q9UPX8 AC131971.1-201ENST00000332881 1482 ntBASIC8.48□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms