Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SSU72Q9NP77 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SSU72Q9NP77 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC6.97□□□□□ -1.29
SSU72Q9NP77 AL731556.1-201ENST00000394628 3711 ntBASIC6.97□□□□□ -1.29
SSU72Q9NP77 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
SSU72Q9NP77 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
SSU72Q9NP77 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC6.96□□□□□ -1.29
SSU72Q9NP77 KIAA0753-207ENST00000572370 3263 ntAPPRIS ALT2 TSL 2 BASIC6.96□□□□□ -1.29
SSU72Q9NP77 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC6.96□□□□□ -1.29
SSU72Q9NP77 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
SSU72Q9NP77 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC6.96□□□□□ -1.29
SSU72Q9NP77 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC6.96□□□□□ -1.29
SSU72Q9NP77 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
SSU72Q9NP77 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
SSU72Q9NP77 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
SSU72Q9NP77 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
SSU72Q9NP77 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
SSU72Q9NP77 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
SSU72Q9NP77 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
SSU72Q9NP77 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
SSU72Q9NP77 RN7SKP76-201ENST00000364419 323 ntBASIC6.96□□□□□ -1.3
SSU72Q9NP77 RGS8-202ENST00000367556 843 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
SSU72Q9NP77 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
SSU72Q9NP77 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.3
SSU72Q9NP77 NOX1-203ENST00000372964 661 ntTSL 2 BASIC6.96□□□□□ -1.3
SSU72Q9NP77 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
SSU72Q9NP77 AAMDC-202ENST00000393427 531 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
SSU72Q9NP77 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC6.96□□□□□ -1.3
SSU72Q9NP77 AC136624.1-201ENST00000400791 413 ntBASIC6.96□□□□□ -1.3
SSU72Q9NP77 RN7SKP142-201ENST00000411236 328 ntBASIC6.96□□□□□ -1.3
SSU72Q9NP77 RN7SKP85-201ENST00000411349 318 ntBASIC6.96□□□□□ -1.3
SSU72Q9NP77 MED15P8-201ENST00000411601 545 ntBASIC6.96□□□□□ -1.3
SSU72Q9NP77 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC6.96□□□□□ -1.3
SSU72Q9NP77 AC027644.1-201ENST00000419595 298 ntBASIC6.96□□□□□ -1.3
SSU72Q9NP77 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC6.96□□□□□ -1.3
SSU72Q9NP77 SNX19-202ENST00000426933 888 ntTSL 2 BASIC6.96□□□□□ -1.3
SSU72Q9NP77 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC6.96□□□□□ -1.3
SSU72Q9NP77 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC6.96□□□□□ -1.3
SSU72Q9NP77 AL451136.1-201ENST00000435399 325 ntBASIC6.96□□□□□ -1.3
SSU72Q9NP77 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
SSU72Q9NP77 AL604028.2-201ENST00000437848 788 ntBASIC6.96□□□□□ -1.3
SSU72Q9NP77 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
SSU72Q9NP77 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.96□□□□□ -1.3
SSU72Q9NP77 CDC27P1-201ENST00000445384 715 ntBASIC6.96□□□□□ -1.3
SSU72Q9NP77 HMGB1P48-201ENST00000446155 598 ntBASIC6.96□□□□□ -1.3
SSU72Q9NP77 RN7SL587P-201ENST00000459853 281 ntBASIC6.96□□□□□ -1.3
SSU72Q9NP77 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC6.96□□□□□ -1.3
SSU72Q9NP77 RN7SL621P-201ENST00000472565 299 ntBASIC6.96□□□□□ -1.3
SSU72Q9NP77 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
SSU72Q9NP77 AC112206.2-201ENST00000503106 557 ntTSL 4 BASIC6.96□□□□□ -1.3
SSU72Q9NP77 FGB-207ENST00000509493 1164 ntTSL 5 BASIC6.96□□□□□ -1.3
SSU72Q9NP77 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC6.96□□□□□ -1.3
SSU72Q9NP77 C8orf87-201ENST00000521906 588 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
SSU72Q9NP77 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC6.96□□□□□ -1.3
SSU72Q9NP77 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC6.96□□□□□ -1.3
SSU72Q9NP77 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC6.96□□□□□ -1.3
SSU72Q9NP77 AHI1-217ENST00000534469 680 ntTSL 3 BASIC6.96□□□□□ -1.3
SSU72Q9NP77 AC140118.1-201ENST00000539209 532 ntTSL 4 BASIC6.96□□□□□ -1.3
SSU72Q9NP77 SOX5-213ENST00000541847 758 ntTSL 3 BASIC6.96□□□□□ -1.3
SSU72Q9NP77 AC243972.1-201ENST00000542992 570 ntTSL 4 BASIC6.96□□□□□ -1.3
SSU72Q9NP77 UBE2NP1-201ENST00000545592 458 ntBASIC6.96□□□□□ -1.3
SSU72Q9NP77 AC087883.1-201ENST00000551882 391 ntBASIC6.96□□□□□ -1.3
SSU72Q9NP77 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC6.96□□□□□ -1.3
SSU72Q9NP77 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC6.96□□□□□ -1.3
SSU72Q9NP77 CRADD-211ENST00000552983 839 ntTSL 5 BASIC6.96□□□□□ -1.3
SSU72Q9NP77 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC6.96□□□□□ -1.3
SSU72Q9NP77 HIGD1AP17-201ENST00000554576 276 ntBASIC6.96□□□□□ -1.3
SSU72Q9NP77 AC245505.1-201ENST00000556398 224 ntBASIC6.96□□□□□ -1.3
SSU72Q9NP77 AC018558.5-201ENST00000565840 952 ntBASIC6.96□□□□□ -1.3
SSU72Q9NP77 AC096708.2-201ENST00000577676 512 ntBASIC6.96□□□□□ -1.3
SSU72Q9NP77 MIR548S-201ENST00000581352 82 ntBASIC6.96□□□□□ -1.3
SSU72Q9NP77 AC090699.1-201ENST00000586264 321 ntBASIC6.96□□□□□ -1.3
SSU72Q9NP77 LINC00663-205ENST00000589508 432 ntTSL 3 BASIC6.96□□□□□ -1.3
SSU72Q9NP77 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.96□□□□□ -1.3
SSU72Q9NP77 EDRF1-AS1-205ENST00000601363 712 ntTSL 5 BASIC6.96□□□□□ -1.3
SSU72Q9NP77 AC100767.2-201ENST00000604840 693 ntBASIC6.96□□□□□ -1.3
SSU72Q9NP77 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
SSU72Q9NP77 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC6.96□□□□□ -1.3
SSU72Q9NP77 MIR6723-201ENST00000621981 89 ntBASIC6.96□□□□□ -1.3
SSU72Q9NP77 COMMD6-205ENST00000406936 1628 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
SSU72Q9NP77 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
SSU72Q9NP77 AP002370.1-201ENST00000528055 1602 ntBASIC6.96□□□□□ -1.3
SSU72Q9NP77 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC6.96□□□□□ -1.3
SSU72Q9NP77 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
SSU72Q9NP77 SCFD1-202ENST00000396629 2021 ntTSL 2 BASIC6.96□□□□□ -1.3
SSU72Q9NP77 AP000776.1-201ENST00000530032 1663 ntBASIC6.96□□□□□ -1.3
SSU72Q9NP77 GPR33-201ENST00000399285 1343 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
SSU72Q9NP77 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
SSU72Q9NP77 DCP1A-201ENST00000294241 1853 ntTSL 2 BASIC6.96□□□□□ -1.3
SSU72Q9NP77 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
SSU72Q9NP77 TATDN2P3-201ENST00000452855 3665 ntBASIC6.96□□□□□ -1.3
SSU72Q9NP77 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC6.96□□□□□ -1.3
SSU72Q9NP77 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
SSU72Q9NP77 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC6.95□□□□□ -1.3
SSU72Q9NP77 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
SSU72Q9NP77 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SSU72Q9NP77 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SSU72Q9NP77 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
SSU72Q9NP77 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
SSU72Q9NP77 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC6.95□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms