Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 AC026477.1-201ENST00000439391 616 ntBASIC4.44□□□□□ -1.7
KRTAP3-1Q9BYR8 DNM1P24-201ENST00000441091 490 ntBASIC4.44□□□□□ -1.7
KRTAP3-1Q9BYR8 AL591806.1-201ENST00000447167 1109 ntTSL 3 BASIC4.44□□□□□ -1.7
KRTAP3-1Q9BYR8 NDUFA5P3-201ENST00000449348 345 ntBASIC4.44□□□□□ -1.7
KRTAP3-1Q9BYR8 PRDX2P1-201ENST00000450181 589 ntBASIC4.44□□□□□ -1.7
KRTAP3-1Q9BYR8 HCG25-220ENST00000450514 759 ntTSL 3 BASIC4.44□□□□□ -1.7
KRTAP3-1Q9BYR8 AC069285.1-201ENST00000450891 419 ntTSL 3 BASIC4.44□□□□□ -1.7
KRTAP3-1Q9BYR8 IFNA22P-201ENST00000458710 570 ntBASIC4.44□□□□□ -1.7
KRTAP3-1Q9BYR8 RN7SL749P-201ENST00000460421 290 ntBASIC4.44□□□□□ -1.7
KRTAP3-1Q9BYR8 RN7SL566P-201ENST00000467650 296 ntBASIC4.44□□□□□ -1.7
KRTAP3-1Q9BYR8 RN7SL400P-201ENST00000473634 296 ntBASIC4.44□□□□□ -1.7
KRTAP3-1Q9BYR8 RN7SL553P-201ENST00000482215 298 ntBASIC4.44□□□□□ -1.7
KRTAP3-1Q9BYR8 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.44□□□□□ -1.7
KRTAP3-1Q9BYR8 RN7SL584P-201ENST00000492309 297 ntBASIC4.44□□□□□ -1.7
KRTAP3-1Q9BYR8 TMEM251P1-201ENST00000503717 318 ntBASIC4.44□□□□□ -1.7
KRTAP3-1Q9BYR8 AC026787.1-201ENST00000504182 420 ntTSL 5 BASIC4.44□□□□□ -1.7
KRTAP3-1Q9BYR8 AMTN-202ENST00000504451 761 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
KRTAP3-1Q9BYR8 HSPD1P15-201ENST00000505573 1122 ntBASIC4.44□□□□□ -1.7
KRTAP3-1Q9BYR8 AC109927.1-203ENST00000507038 421 ntTSL 5 BASIC4.44□□□□□ -1.7
KRTAP3-1Q9BYR8 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.44□□□□□ -1.7
KRTAP3-1Q9BYR8 ROPN1B-207ENST00000511082 782 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
KRTAP3-1Q9BYR8 AC097518.1-201ENST00000512516 421 ntTSL 3 BASIC4.44□□□□□ -1.7
KRTAP3-1Q9BYR8 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC4.44□□□□□ -1.7
KRTAP3-1Q9BYR8 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.44□□□□□ -1.7
KRTAP3-1Q9BYR8 Y_RNA.668-201ENST00000516233 93 ntBASIC4.44□□□□□ -1.7
KRTAP3-1Q9BYR8 RNU1-125P-201ENST00000516752 129 ntBASIC4.44□□□□□ -1.7
KRTAP3-1Q9BYR8 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC4.44□□□□□ -1.7
KRTAP3-1Q9BYR8 AC107934.1-201ENST00000522215 217 ntBASIC4.44□□□□□ -1.7
KRTAP3-1Q9BYR8 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC4.44□□□□□ -1.7
KRTAP3-1Q9BYR8 HAVCR2-204ENST00000522593 975 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
KRTAP3-1Q9BYR8 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC4.44□□□□□ -1.7
KRTAP3-1Q9BYR8 AP001767.2-201ENST00000527291 382 ntBASIC4.44□□□□□ -1.7
KRTAP3-1Q9BYR8 Metazoa_SRP.11-201ENST00000537819 269 ntBASIC4.44□□□□□ -1.7
KRTAP3-1Q9BYR8 AC156455.1-202ENST00000540968 587 ntTSL 4 BASIC4.44□□□□□ -1.7
KRTAP3-1Q9BYR8 AL139023.1-201ENST00000548280 508 ntTSL 4 BASIC4.44□□□□□ -1.7
KRTAP3-1Q9BYR8 AC007375.1-201ENST00000554513 578 ntBASIC4.44□□□□□ -1.7
KRTAP3-1Q9BYR8 LINC01852-202ENST00000559232 533 ntTSL 4 BASIC4.44□□□□□ -1.7
KRTAP3-1Q9BYR8 HSPE1P3-201ENST00000559254 309 ntBASIC4.44□□□□□ -1.7
KRTAP3-1Q9BYR8 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.44□□□□□ -1.7
KRTAP3-1Q9BYR8 C16orf45-203ENST00000561692 534 ntTSL 3 BASIC4.44□□□□□ -1.7
KRTAP3-1Q9BYR8 BCO1-203ENST00000564552 949 ntTSL 2 BASIC4.44□□□□□ -1.7
KRTAP3-1Q9BYR8 AC118754.2-201ENST00000574133 537 ntTSL 4 BASIC4.44□□□□□ -1.7
KRTAP3-1Q9BYR8 AC104984.4-201ENST00000577420 224 ntTSL 3 BASIC4.44□□□□□ -1.7
KRTAP3-1Q9BYR8 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.44□□□□□ -1.7
KRTAP3-1Q9BYR8 SNORD39.2-201ENST00000579995 76 ntBASIC4.44□□□□□ -1.7
KRTAP3-1Q9BYR8 AC018697.1-202ENST00000582650 592 ntTSL 4 BASIC4.44□□□□□ -1.7
KRTAP3-1Q9BYR8 MAGOH2P-202ENST00000584384 429 ntBASIC4.44□□□□□ -1.7
KRTAP3-1Q9BYR8 MIR3942-201ENST00000585264 109 ntBASIC4.44□□□□□ -1.7
KRTAP3-1Q9BYR8 AC023855.1-201ENST00000585899 359 ntTSL 4 BASIC4.44□□□□□ -1.7
KRTAP3-1Q9BYR8 AP001029.3-201ENST00000588063 596 ntBASIC4.44□□□□□ -1.7
KRTAP3-1Q9BYR8 PRKAR1A-214ENST00000588188 1209 ntTSL 3 BASIC4.44□□□□□ -1.7
KRTAP3-1Q9BYR8 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.44□□□□□ -1.7
KRTAP3-1Q9BYR8 C1orf186-208ENST00000603378 614 ntTSL 3 BASIC4.44□□□□□ -1.7
KRTAP3-1Q9BYR8 PHBP20-201ENST00000603694 818 ntBASIC4.44□□□□□ -1.7
KRTAP3-1Q9BYR8 AC073869.3-201ENST00000609270 580 ntTSL 5 BASIC4.44□□□□□ -1.7
KRTAP3-1Q9BYR8 AC062037.2-201ENST00000610137 73 ntBASIC4.44□□□□□ -1.7
KRTAP3-1Q9BYR8 Metazoa_SRP.74-201ENST00000614973 284 ntBASIC4.44□□□□□ -1.7
KRTAP3-1Q9BYR8 uc_338.11-201ENST00000619132 160 ntBASIC4.44□□□□□ -1.7
KRTAP3-1Q9BYR8 AL512638.3-201ENST00000620370 298 ntBASIC4.44□□□□□ -1.7
KRTAP3-1Q9BYR8 AC009120.2-201ENST00000620711 522 ntTSL 3 BASIC4.44□□□□□ -1.7
KRTAP3-1Q9BYR8 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
KRTAP3-1Q9BYR8 AL513327.1-208ENST00000624012 1047 ntTSL 5 BASIC4.44□□□□□ -1.7
KRTAP3-1Q9BYR8 AC138627.2-201ENST00000624202 601 ntBASIC4.44□□□□□ -1.7
KRTAP3-1Q9BYR8 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC4.44□□□□□ -1.7
KRTAP3-1Q9BYR8 LINC01835-203ENST00000639800 567 ntBASIC4.44□□□□□ -1.7
KRTAP3-1Q9BYR8 OR52H1-202ENST00000641796 1061 ntBASIC4.44□□□□□ -1.7
KRTAP3-1Q9BYR8 GPR107-202ENST00000372406 7353 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
KRTAP3-1Q9BYR8 CHD7-202ENST00000524602 3456 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
KRTAP3-1Q9BYR8 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
KRTAP3-1Q9BYR8 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
KRTAP3-1Q9BYR8 PRDM11-206ENST00000622142 10730 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
KRTAP3-1Q9BYR8 LRRC37A-202ENST00000393465 4997 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
KRTAP3-1Q9BYR8 DDX24-205ENST00000555054 2769 ntTSL 5 BASIC4.44□□□□□ -1.7
KRTAP3-1Q9BYR8 VIPR1-AS1-201ENST00000452639 1435 ntTSL 5 BASIC4.44□□□□□ -1.7
KRTAP3-1Q9BYR8 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.44□□□□□ -1.7
KRTAP3-1Q9BYR8 DIAPH3-201ENST00000267215 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
KRTAP3-1Q9BYR8 GABRA1-202ENST00000393943 4686 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
KRTAP3-1Q9BYR8 ZBTB40-204ENST00000404138 8992 ntAPPRIS P3 TSL 5 BASIC4.44□□□□□ -1.7
KRTAP3-1Q9BYR8 TRPM7-207ENST00000560955 7218 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
KRTAP3-1Q9BYR8 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
KRTAP3-1Q9BYR8 TTC26-210ENST00000495038 1599 ntTSL 2 BASIC4.44□□□□□ -1.7
KRTAP3-1Q9BYR8 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
KRTAP3-1Q9BYR8 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC4.44□□□□□ -1.7
KRTAP3-1Q9BYR8 PAN2-202ENST00000425394 5372 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
KRTAP3-1Q9BYR8 TLN2-211ENST00000636159 7441 ntTSL 5 BASIC4.44□□□□□ -1.7
KRTAP3-1Q9BYR8 SPATA13-201ENST00000343003 6405 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
KRTAP3-1Q9BYR8 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
KRTAP3-1Q9BYR8 FANCB-201ENST00000324138 2894 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
KRTAP3-1Q9BYR8 ZNF469-201ENST00000437464 13203 ntAPPRIS P2 TSL 5 BASIC4.43□□□□□ -1.7
KRTAP3-1Q9BYR8 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
KRTAP3-1Q9BYR8 FPR3-201ENST00000339223 2620 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
KRTAP3-1Q9BYR8 CSNK2A1-201ENST00000217244 4416 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
KRTAP3-1Q9BYR8 MECOM-208ENST00000468789 3691 ntAPPRIS P3 TSL 2 BASIC4.43□□□□□ -1.7
KRTAP3-1Q9BYR8 PRICKLE1-213ENST00000639589 5761 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
KRTAP3-1Q9BYR8 NAALAD2-204ENST00000525171 1613 ntTSL 2 BASIC4.43□□□□□ -1.7
KRTAP3-1Q9BYR8 SYNPR-212ENST00000479198 2436 ntTSL 5 BASIC4.43□□□□□ -1.7
KRTAP3-1Q9BYR8 CYP4A22-202ENST00000371890 1780 ntTSL 5 BASIC4.43□□□□□ -1.7
KRTAP3-1Q9BYR8 RNF6P1-201ENST00000444889 1784 ntBASIC4.43□□□□□ -1.7
KRTAP3-1Q9BYR8 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
KRTAP3-1Q9BYR8 SAR1A-202ENST00000373238 3227 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms