Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
CROCCP3Q8IVE0 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
CROCCP3Q8IVE0 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
CROCCP3Q8IVE0 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
CROCCP3Q8IVE0 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
CROCCP3Q8IVE0 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.34□□□□□ -1.56
CROCCP3Q8IVE0 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
CROCCP3Q8IVE0 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.34□□□□□ -1.56
CROCCP3Q8IVE0 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
CROCCP3Q8IVE0 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
CROCCP3Q8IVE0 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.34□□□□□ -1.56
CROCCP3Q8IVE0 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CROCCP3Q8IVE0 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.33□□□□□ -1.56
CROCCP3Q8IVE0 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.33□□□□□ -1.56
CROCCP3Q8IVE0 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CROCCP3Q8IVE0 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CROCCP3Q8IVE0 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.33□□□□□ -1.56
CROCCP3Q8IVE0 AL022322.2-201ENST00000624072 20397 ntBASIC5.33□□□□□ -1.56
CROCCP3Q8IVE0 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.33□□□□□ -1.56
CROCCP3Q8IVE0 AC092681.1-201ENST00000297369 291 ntBASIC5.33□□□□□ -1.56
CROCCP3Q8IVE0 NUDT5-202ENST00000378937 919 ntTSL 3 BASIC5.33□□□□□ -1.56
CROCCP3Q8IVE0 GLS-203ENST00000409215 632 ntTSL 4 BASIC5.33□□□□□ -1.56
CROCCP3Q8IVE0 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CROCCP3Q8IVE0 RNA5SP487-201ENST00000410186 122 ntBASIC5.33□□□□□ -1.56
CROCCP3Q8IVE0 RN7SKP137-201ENST00000411074 307 ntBASIC5.33□□□□□ -1.56
CROCCP3Q8IVE0 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CROCCP3Q8IVE0 KIF4CP-201ENST00000422742 1279 ntBASIC5.33□□□□□ -1.56
CROCCP3Q8IVE0 OR10T1P-201ENST00000424327 947 ntBASIC5.33□□□□□ -1.56
CROCCP3Q8IVE0 AHCYP8-201ENST00000425108 209 ntBASIC5.33□□□□□ -1.56
CROCCP3Q8IVE0 KRT18P53-201ENST00000431919 117 ntBASIC5.33□□□□□ -1.56
CROCCP3Q8IVE0 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC5.33□□□□□ -1.56
CROCCP3Q8IVE0 AC016396.1-201ENST00000440189 328 ntTSL 3 BASIC5.33□□□□□ -1.56
CROCCP3Q8IVE0 MTND6P5-201ENST00000448266 512 ntBASIC5.33□□□□□ -1.56
CROCCP3Q8IVE0 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC5.33□□□□□ -1.56
CROCCP3Q8IVE0 AC099670.1-201ENST00000455141 783 ntBASIC5.33□□□□□ -1.56
CROCCP3Q8IVE0 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.33□□□□□ -1.56
CROCCP3Q8IVE0 AL357143.1-201ENST00000457239 934 ntTSL 5 BASIC5.33□□□□□ -1.56
CROCCP3Q8IVE0 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.33□□□□□ -1.56
CROCCP3Q8IVE0 RN7SL643P-201ENST00000471845 291 ntBASIC5.33□□□□□ -1.56
CROCCP3Q8IVE0 AC025271.1-201ENST00000485045 429 ntBASIC5.33□□□□□ -1.56
CROCCP3Q8IVE0 PFN2-213ENST00000494827 793 ntTSL 4 BASIC5.33□□□□□ -1.56
CROCCP3Q8IVE0 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CROCCP3Q8IVE0 CCDC11P1-201ENST00000503137 1162 ntBASIC5.33□□□□□ -1.56
CROCCP3Q8IVE0 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC5.33□□□□□ -1.56
CROCCP3Q8IVE0 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC5.33□□□□□ -1.56
CROCCP3Q8IVE0 RN7SKP288-201ENST00000516227 268 ntBASIC5.33□□□□□ -1.56
CROCCP3Q8IVE0 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC5.33□□□□□ -1.56
CROCCP3Q8IVE0 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.33□□□□□ -1.56
CROCCP3Q8IVE0 AC026616.1-201ENST00000523157 525 ntBASIC5.33□□□□□ -1.56
CROCCP3Q8IVE0 AC107952.1-201ENST00000524200 376 ntBASIC5.33□□□□□ -1.56
CROCCP3Q8IVE0 LRP4-AS1-202ENST00000531719 731 ntTSL 4 BASIC5.33□□□□□ -1.56
CROCCP3Q8IVE0 RPL3P13-201ENST00000550415 216 ntBASIC5.33□□□□□ -1.56
CROCCP3Q8IVE0 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.33□□□□□ -1.56
CROCCP3Q8IVE0 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.33□□□□□ -1.56
CROCCP3Q8IVE0 OR4N2-203ENST00000557677 1008 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CROCCP3Q8IVE0 AC067805.1-201ENST00000559344 470 ntBASIC5.33□□□□□ -1.56
CROCCP3Q8IVE0 AC092718.4-201ENST00000566639 716 ntBASIC5.33□□□□□ -1.56
CROCCP3Q8IVE0 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.33□□□□□ -1.56
CROCCP3Q8IVE0 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.33□□□□□ -1.56
CROCCP3Q8IVE0 MIR5705-201ENST00000579870 89 ntBASIC5.33□□□□□ -1.56
CROCCP3Q8IVE0 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.33□□□□□ -1.56
CROCCP3Q8IVE0 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.33□□□□□ -1.56
CROCCP3Q8IVE0 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CROCCP3Q8IVE0 AL118556.2-201ENST00000614375 824 ntBASIC5.33□□□□□ -1.56
CROCCP3Q8IVE0 AL122125.1-201ENST00000616999 600 ntBASIC5.33□□□□□ -1.56
CROCCP3Q8IVE0 AL590410.1-201ENST00000617925 333 ntBASIC5.33□□□□□ -1.56
CROCCP3Q8IVE0 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.33□□□□□ -1.56
CROCCP3Q8IVE0 AC007347.2-201ENST00000623044 180 ntBASIC5.33□□□□□ -1.56
CROCCP3Q8IVE0 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.33□□□□□ -1.56
CROCCP3Q8IVE0 AL353796.1-201ENST00000561542 3241 ntBASIC5.33□□□□□ -1.56
CROCCP3Q8IVE0 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CROCCP3Q8IVE0 OR55B1P-203ENST00000641518 2602 ntBASIC5.33□□□□□ -1.56
CROCCP3Q8IVE0 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CROCCP3Q8IVE0 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.33□□□□□ -1.56
CROCCP3Q8IVE0 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CROCCP3Q8IVE0 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.33□□□□□ -1.56
CROCCP3Q8IVE0 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.33□□□□□ -1.56
CROCCP3Q8IVE0 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CROCCP3Q8IVE0 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CROCCP3Q8IVE0 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CROCCP3Q8IVE0 CASC19-238ENST00000641523 1558 ntBASIC5.33□□□□□ -1.56
CROCCP3Q8IVE0 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CROCCP3Q8IVE0 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CROCCP3Q8IVE0 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.33□□□□□ -1.56
CROCCP3Q8IVE0 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
CROCCP3Q8IVE0 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.32□□□□□ -1.56
CROCCP3Q8IVE0 AC092111.2-201ENST00000611627 1414 ntBASIC5.32□□□□□ -1.56
CROCCP3Q8IVE0 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
CROCCP3Q8IVE0 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.32□□□□□ -1.56
CROCCP3Q8IVE0 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CROCCP3Q8IVE0 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CROCCP3Q8IVE0 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CROCCP3Q8IVE0 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CROCCP3Q8IVE0 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CROCCP3Q8IVE0 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CROCCP3Q8IVE0 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.32□□□□□ -1.56
CROCCP3Q8IVE0 AC130304.1-201ENST00000622942 2385 ntBASIC5.32□□□□□ -1.56
CROCCP3Q8IVE0 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.32□□□□□ -1.56
CROCCP3Q8IVE0 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CROCCP3Q8IVE0 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 534.5 ms