Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
HMGCS2P54868 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
HMGCS2P54868 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
HMGCS2P54868 GABARAPL3-201ENST00000412799 354 ntBASIC6.68□□□□□ -1.34
HMGCS2P54868 AC007568.1-201ENST00000422912 471 ntBASIC6.68□□□□□ -1.34
HMGCS2P54868 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
HMGCS2P54868 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
HMGCS2P54868 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC6.68□□□□□ -1.34
HMGCS2P54868 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
HMGCS2P54868 OR7E116P-201ENST00000448529 957 ntBASIC6.68□□□□□ -1.34
HMGCS2P54868 RN7SL583P-201ENST00000475692 287 ntBASIC6.68□□□□□ -1.34
HMGCS2P54868 RPS4XP1-201ENST00000482189 787 ntBASIC6.68□□□□□ -1.34
HMGCS2P54868 AC004815.1-201ENST00000484185 331 ntBASIC6.68□□□□□ -1.34
HMGCS2P54868 RN7SL570P-201ENST00000484405 292 ntBASIC6.68□□□□□ -1.34
HMGCS2P54868 EIF1P7-201ENST00000487533 337 ntBASIC6.68□□□□□ -1.34
HMGCS2P54868 COX6B1P2-201ENST00000489624 230 ntBASIC6.68□□□□□ -1.34
HMGCS2P54868 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC6.68□□□□□ -1.34
HMGCS2P54868 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.68□□□□□ -1.34
HMGCS2P54868 APPL2-203ENST00000546731 684 ntTSL 2 BASIC6.68□□□□□ -1.34
HMGCS2P54868 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.68□□□□□ -1.34
HMGCS2P54868 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.68□□□□□ -1.34
HMGCS2P54868 SAMMSON-227ENST00000642114 1199 ntBASIC6.68□□□□□ -1.34
HMGCS2P54868 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC6.68□□□□□ -1.34
HMGCS2P54868 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC6.68□□□□□ -1.34
HMGCS2P54868 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
HMGCS2P54868 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
HMGCS2P54868 AL139805.2-201ENST00000455305 2433 ntBASIC6.68□□□□□ -1.34
HMGCS2P54868 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
HMGCS2P54868 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
HMGCS2P54868 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC6.68□□□□□ -1.34
HMGCS2P54868 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.68□□□□□ -1.34
HMGCS2P54868 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.68□□□□□ -1.34
HMGCS2P54868 PABPC1P8-201ENST00000452851 2086 ntBASIC6.67□□□□□ -1.34
HMGCS2P54868 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
HMGCS2P54868 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
HMGCS2P54868 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
HMGCS2P54868 RNA5SP319-201ENST00000362768 119 ntBASIC6.67□□□□□ -1.34
HMGCS2P54868 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
HMGCS2P54868 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
HMGCS2P54868 NIFKP3-201ENST00000417799 865 ntBASIC6.67□□□□□ -1.34
HMGCS2P54868 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC6.67□□□□□ -1.34
HMGCS2P54868 AC015983.1-201ENST00000441577 373 ntBASIC6.67□□□□□ -1.34
HMGCS2P54868 AL450023.1-201ENST00000450868 751 ntBASIC6.67□□□□□ -1.34
HMGCS2P54868 AC068522.1-201ENST00000482895 345 ntBASIC6.67□□□□□ -1.34
HMGCS2P54868 AC073610.1-201ENST00000489971 396 ntBASIC6.67□□□□□ -1.34
HMGCS2P54868 AC024558.1-201ENST00000505008 528 ntBASIC6.67□□□□□ -1.34
HMGCS2P54868 HIGD1AP14-201ENST00000507617 282 ntBASIC6.67□□□□□ -1.34
HMGCS2P54868 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
HMGCS2P54868 OR10G5P-201ENST00000532733 358 ntBASIC6.67□□□□□ -1.34
HMGCS2P54868 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC6.67□□□□□ -1.34
HMGCS2P54868 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
HMGCS2P54868 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC6.67□□□□□ -1.34
HMGCS2P54868 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC6.67□□□□□ -1.34
HMGCS2P54868 AL512329.2-201ENST00000607350 548 ntBASIC6.67□□□□□ -1.34
HMGCS2P54868 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC6.67□□□□□ -1.34
HMGCS2P54868 MIR6837-201ENST00000620884 64 ntBASIC6.67□□□□□ -1.34
HMGCS2P54868 AC136428.4-201ENST00000634254 1155 ntBASIC6.67□□□□□ -1.34
HMGCS2P54868 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
HMGCS2P54868 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC6.67□□□□□ -1.34
HMGCS2P54868 AP004607.3-201ENST00000530354 3915 ntBASIC6.67□□□□□ -1.34
HMGCS2P54868 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
HMGCS2P54868 AC130304.1-201ENST00000622942 2385 ntBASIC6.67□□□□□ -1.34
HMGCS2P54868 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
HMGCS2P54868 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
HMGCS2P54868 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.67□□□□□ -1.34
HMGCS2P54868 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
HMGCS2P54868 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
HMGCS2P54868 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.66□□□□□ -1.34
HMGCS2P54868 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
HMGCS2P54868 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
HMGCS2P54868 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.66□□□□□ -1.34
HMGCS2P54868 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
HMGCS2P54868 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
HMGCS2P54868 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
HMGCS2P54868 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC6.66□□□□□ -1.34
HMGCS2P54868 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
HMGCS2P54868 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
HMGCS2P54868 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
HMGCS2P54868 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.66□□□□□ -1.34
HMGCS2P54868 AL161756.3-201ENST00000641216 2071 ntBASIC6.66□□□□□ -1.34
HMGCS2P54868 MRRFP1-201ENST00000435941 1675 ntBASIC6.66□□□□□ -1.34
HMGCS2P54868 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
HMGCS2P54868 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.66□□□□□ -1.34
HMGCS2P54868 GAPDHP42-201ENST00000406848 981 ntBASIC6.66□□□□□ -1.34
HMGCS2P54868 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC6.66□□□□□ -1.34
HMGCS2P54868 AC019185.1-201ENST00000442718 389 ntBASIC6.66□□□□□ -1.34
HMGCS2P54868 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC6.66□□□□□ -1.34
HMGCS2P54868 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.66□□□□□ -1.34
HMGCS2P54868 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC6.66□□□□□ -1.34
HMGCS2P54868 AC005532.2-201ENST00000467154 373 ntBASIC6.66□□□□□ -1.34
HMGCS2P54868 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
HMGCS2P54868 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.66□□□□□ -1.34
HMGCS2P54868 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC6.66□□□□□ -1.34
HMGCS2P54868 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC6.66□□□□□ -1.34
HMGCS2P54868 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC6.66□□□□□ -1.34
HMGCS2P54868 HSPE1P2-201ENST00000554777 306 ntBASIC6.66□□□□□ -1.34
HMGCS2P54868 AC004825.1-201ENST00000555068 586 ntBASIC6.66□□□□□ -1.34
HMGCS2P54868 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC6.66□□□□□ -1.34
HMGCS2P54868 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC6.66□□□□□ -1.34
HMGCS2P54868 METTL15-211ENST00000634762 718 ntTSL 5 BASIC6.66□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms