Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC7.42□□□□□ -1.22
COL15A1P39059 RN7SL610P-201ENST00000463845 291 ntBASIC7.42□□□□□ -1.22
COL15A1P39059 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC7.42□□□□□ -1.22
COL15A1P39059 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC7.42□□□□□ -1.22
COL15A1P39059 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC7.42□□□□□ -1.22
COL15A1P39059 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
COL15A1P39059 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
COL15A1P39059 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
COL15A1P39059 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC7.42□□□□□ -1.22
COL15A1P39059 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC7.42□□□□□ -1.22
COL15A1P39059 MIR4700-201ENST00000578311 74 ntBASIC7.42□□□□□ -1.22
COL15A1P39059 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC7.42□□□□□ -1.22
COL15A1P39059 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
COL15A1P39059 AC100814.1-201ENST00000606963 623 ntBASIC7.42□□□□□ -1.22
COL15A1P39059 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC7.42□□□□□ -1.22
COL15A1P39059 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC7.42□□□□□ -1.22
COL15A1P39059 AC138627.1-204ENST00000641894 765 ntBASIC7.42□□□□□ -1.22
COL15A1P39059 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC7.42□□□□□ -1.22
COL15A1P39059 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
COL15A1P39059 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
COL15A1P39059 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC7.42□□□□□ -1.22
COL15A1P39059 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
COL15A1P39059 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC7.41□□□□□ -1.22
COL15A1P39059 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
COL15A1P39059 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
COL15A1P39059 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
COL15A1P39059 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
COL15A1P39059 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
COL15A1P39059 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC7.41□□□□□ -1.22
COL15A1P39059 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC7.41□□□□□ -1.22
COL15A1P39059 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
COL15A1P39059 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
COL15A1P39059 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC7.41□□□□□ -1.22
COL15A1P39059 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
COL15A1P39059 SNORA70-201ENST00000384436 135 ntBASIC7.41□□□□□ -1.22
COL15A1P39059 MIR1286-201ENST00000408112 78 ntBASIC7.41□□□□□ -1.22
COL15A1P39059 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC7.41□□□□□ -1.22
COL15A1P39059 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC7.41□□□□□ -1.22
COL15A1P39059 RSL24D1P2-201ENST00000445584 366 ntBASIC7.41□□□□□ -1.22
COL15A1P39059 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC7.41□□□□□ -1.22
COL15A1P39059 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
COL15A1P39059 RPL32P33-201ENST00000487023 394 ntBASIC7.41□□□□□ -1.22
COL15A1P39059 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC7.41□□□□□ -1.22
COL15A1P39059 AC025470.1-201ENST00000510053 2032 ntBASIC7.41□□□□□ -1.22
COL15A1P39059 AC114786.1-201ENST00000512892 1415 ntBASIC7.41□□□□□ -1.22
COL15A1P39059 SCARNA6.1-201ENST00000516989 238 ntBASIC7.41□□□□□ -1.22
COL15A1P39059 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC7.41□□□□□ -1.22
COL15A1P39059 NRBF2P4-201ENST00000520874 850 ntBASIC7.41□□□□□ -1.22
COL15A1P39059 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC7.41□□□□□ -1.22
COL15A1P39059 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC7.41□□□□□ -1.22
COL15A1P39059 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC7.41□□□□□ -1.22
COL15A1P39059 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC7.41□□□□□ -1.22
COL15A1P39059 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
COL15A1P39059 AC006213.4-201ENST00000616184 634 ntBASIC7.41□□□□□ -1.22
COL15A1P39059 AF117829.2-201ENST00000619538 361 ntBASIC7.41□□□□□ -1.22
COL15A1P39059 MIR8080-201ENST00000622224 89 ntBASIC7.41□□□□□ -1.22
COL15A1P39059 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC7.41□□□□□ -1.22
COL15A1P39059 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
COL15A1P39059 AL121768.1-201ENST00000613917 2544 ntBASIC7.41□□□□□ -1.22
COL15A1P39059 AC130304.1-201ENST00000622942 2385 ntBASIC7.41□□□□□ -1.22
COL15A1P39059 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC7.41□□□□□ -1.22
COL15A1P39059 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC7.41□□□□□ -1.22
COL15A1P39059 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC7.41□□□□□ -1.22
COL15A1P39059 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC7.4□□□□□ -1.22
COL15A1P39059 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.22
COL15A1P39059 CASC19-248ENST00000641674 1356 ntBASIC7.4□□□□□ -1.22
COL15A1P39059 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC7.4□□□□□ -1.22
COL15A1P39059 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC7.4□□□□□ -1.22
COL15A1P39059 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.22
COL15A1P39059 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
COL15A1P39059 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
COL15A1P39059 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC7.4□□□□□ -1.22
COL15A1P39059 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
COL15A1P39059 WBP11P1-201ENST00000562560 1931 ntBASIC7.4□□□□□ -1.22
COL15A1P39059 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC7.4□□□□□ -1.22
COL15A1P39059 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC7.4□□□□□ -1.22
COL15A1P39059 RPS17P17-201ENST00000419392 409 ntBASIC7.4□□□□□ -1.22
COL15A1P39059 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC7.4□□□□□ -1.22
COL15A1P39059 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC7.4□□□□□ -1.22
COL15A1P39059 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC7.4□□□□□ -1.22
COL15A1P39059 HCG14-201ENST00000444986 413 ntTSL 2 BASIC7.4□□□□□ -1.22
COL15A1P39059 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC7.4□□□□□ -1.22
COL15A1P39059 AC100832.1-201ENST00000471945 383 ntBASIC7.4□□□□□ -1.22
COL15A1P39059 RPL38P3-201ENST00000484463 213 ntBASIC7.4□□□□□ -1.22
COL15A1P39059 OR5M14P-201ENST00000506803 618 ntBASIC7.4□□□□□ -1.22
COL15A1P39059 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC7.4□□□□□ -1.22
COL15A1P39059 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC7.4□□□□□ -1.22
COL15A1P39059 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC7.4□□□□□ -1.22
COL15A1P39059 MIR4260-201ENST00000583107 67 ntBASIC7.4□□□□□ -1.22
COL15A1P39059 MIR132-201ENST00000591554 101 ntBASIC7.4□□□□□ -1.22
COL15A1P39059 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC7.4□□□□□ -1.22
COL15A1P39059 FKBP1AP1-201ENST00000594588 318 ntBASIC7.4□□□□□ -1.22
COL15A1P39059 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
COL15A1P39059 AC118658.2-201ENST00000618697 459 ntBASIC7.4□□□□□ -1.22
COL15A1P39059 AC006213.5-201ENST00000619673 288 ntBASIC7.4□□□□□ -1.22
COL15A1P39059 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
COL15A1P39059 SAMMSON-227ENST00000642114 1199 ntBASIC7.4□□□□□ -1.22
COL15A1P39059 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
COL15A1P39059 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC7.4□□□□□ -1.23
COL15A1P39059 CR383656.5-201ENST00000547616 1340 ntBASIC7.4□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms