Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
O00370 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
O00370 AC004656.1-201ENST00000568479 4951 ntBASIC6.29□□□□□ -1.4
O00370 RNA5SP477-201ENST00000362639 119 ntBASIC6.29□□□□□ -1.4
O00370 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC6.29□□□□□ -1.4
O00370 RPS4XP5-201ENST00000419038 768 ntBASIC6.29□□□□□ -1.4
O00370 SETP9-201ENST00000423837 832 ntBASIC6.29□□□□□ -1.4
O00370 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC6.29□□□□□ -1.4
O00370 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC6.29□□□□□ -1.4
O00370 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC6.29□□□□□ -1.4
O00370 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC6.29□□□□□ -1.4
O00370 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.29□□□□□ -1.4
O00370 AL359839.1-201ENST00000451975 1160 ntBASIC6.29□□□□□ -1.4
O00370 AC112184.1-201ENST00000505179 312 ntBASIC6.29□□□□□ -1.4
O00370 RN7SKP288-201ENST00000516227 268 ntBASIC6.29□□□□□ -1.4
O00370 CETN3-206ENST00000522864 738 ntTSL 3 BASIC6.29□□□□□ -1.4
O00370 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC6.29□□□□□ -1.4
O00370 OR4A42P-201ENST00000531397 938 ntBASIC6.29□□□□□ -1.4
O00370 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.29□□□□□ -1.4
O00370 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC6.29□□□□□ -1.4
O00370 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC6.29□□□□□ -1.4
O00370 MIR4776-2-201ENST00000580204 80 ntBASIC6.29□□□□□ -1.4
O00370 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.29□□□□□ -1.4
O00370 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC6.29□□□□□ -1.4
O00370 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC6.29□□□□□ -1.4
O00370 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC6.29□□□□□ -1.4
O00370 AL512356.3-201ENST00000623005 461 ntBASIC6.29□□□□□ -1.4
O00370 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.29□□□□□ -1.4
O00370 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
O00370 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
O00370 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
O00370 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC6.29□□□□□ -1.4
O00370 DNM1P47-203ENST00000571780 12667 ntBASIC6.29□□□□□ -1.4
O00370 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.29□□□□□ -1.4
O00370 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.29□□□□□ -1.4
O00370 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
O00370 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
O00370 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
O00370 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
O00370 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
O00370 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.28□□□□□ -1.4
O00370 AC005224.3-201ENST00000584683 2140 ntBASIC6.28□□□□□ -1.4
O00370 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.28□□□□□ -1.4
O00370 MIR133A2-201ENST00000347538 102 ntBASIC6.28□□□□□ -1.4
O00370 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
O00370 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC6.28□□□□□ -1.4
O00370 AC016739.1-201ENST00000405359 345 ntBASIC6.28□□□□□ -1.4
O00370 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
O00370 RN7SKP240-201ENST00000410583 375 ntBASIC6.28□□□□□ -1.4
O00370 BX284632.2-201ENST00000421091 399 ntBASIC6.28□□□□□ -1.4
O00370 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC6.28□□□□□ -1.4
O00370 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC6.28□□□□□ -1.4
O00370 AL663074.2-201ENST00000440621 479 ntBASIC6.28□□□□□ -1.4
O00370 AL512605.1-202ENST00000441919 381 ntBASIC6.28□□□□□ -1.4
O00370 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.28□□□□□ -1.4
O00370 AL359955.2-201ENST00000445380 353 ntBASIC6.28□□□□□ -1.4
O00370 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.28□□□□□ -1.4
O00370 AL603882.1-201ENST00000463059 681 ntBASIC6.28□□□□□ -1.4
O00370 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC6.28□□□□□ -1.4
O00370 TRBV5-2-201ENST00000489095 273 ntBASIC6.28□□□□□ -1.4
O00370 CBX1-205ENST00000495350 550 ntTSL 2 BASIC6.28□□□□□ -1.4
O00370 PFN1P8-201ENST00000497012 543 ntBASIC6.28□□□□□ -1.4
O00370 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC6.28□□□□□ -1.4
O00370 OR5H7P-201ENST00000514084 930 ntBASIC6.28□□□□□ -1.4
O00370 SETP21-201ENST00000514799 892 ntBASIC6.28□□□□□ -1.4
O00370 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.28□□□□□ -1.4
O00370 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC6.28□□□□□ -1.4
O00370 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.28□□□□□ -1.4
O00370 TXNP4-201ENST00000575018 310 ntBASIC6.28□□□□□ -1.4
O00370 AC023389.2-201ENST00000580031 955 ntBASIC6.28□□□□□ -1.4
O00370 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
O00370 AC009120.7-201ENST00000623452 780 ntBASIC6.28□□□□□ -1.4
O00370 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC6.28□□□□□ -1.4
O00370 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
O00370 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
O00370 AC027088.4-201ENST00000611559 1947 ntBASIC6.28□□□□□ -1.4
O00370 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
O00370 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.28□□□□□ -1.4
O00370 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.28□□□□□ -1.4
O00370 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.28□□□□□ -1.4
O00370 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
O00370 SLC9B1P1-201ENST00000331172 1337 ntBASIC6.27□□□□□ -1.41
O00370 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
O00370 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
O00370 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
O00370 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
O00370 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
O00370 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
O00370 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
O00370 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC6.27□□□□□ -1.41
O00370 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
O00370 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
O00370 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.27□□□□□ -1.41
O00370 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
O00370 RN7SKP128-201ENST00000364270 303 ntBASIC6.27□□□□□ -1.41
O00370 RAB5CP1-201ENST00000395972 580 ntBASIC6.27□□□□□ -1.41
O00370 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
O00370 XIST-201ENST00000416330 750 ntTSL 2 BASIC6.27□□□□□ -1.41
O00370 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
O00370 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms