Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 GIMAP2-201ENST00000223293 1449 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
PCDHB11Q9Y5F2 AL365475.1-201ENST00000565135 1949 ntBASIC7.68□□□□□ -1.18
PCDHB11Q9Y5F2 IGF1R-206ENST00000558762 11726 ntAPPRIS ALT1 TSL 1 (best) BASIC7.68□□□□□ -1.18
PCDHB11Q9Y5F2 ACSL1-211ENST00000515030 3948 ntAPPRIS P3 TSL 5 BASIC7.68□□□□□ -1.18
PCDHB11Q9Y5F2 ARHGEF7-208ENST00000426073 4921 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
PCDHB11Q9Y5F2 SLC6A2-206ENST00000567238 3160 ntTSL 2 BASIC7.67□□□□□ -1.18
PCDHB11Q9Y5F2 DET1-202ENST00000444300 2154 ntTSL 5 BASIC7.67□□□□□ -1.18
PCDHB11Q9Y5F2 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
PCDHB11Q9Y5F2 RBBP4-206ENST00000458695 1674 ntTSL 2 BASIC7.67□□□□□ -1.18
PCDHB11Q9Y5F2 HMGXB4-201ENST00000216106 4047 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
PCDHB11Q9Y5F2 PROM1-206ENST00000505450 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
PCDHB11Q9Y5F2 TMSB4XP2-201ENST00000335179 210 ntBASIC7.67□□□□□ -1.18
PCDHB11Q9Y5F2 SNORA63-201ENST00000363450 132 ntBASIC7.67□□□□□ -1.18
PCDHB11Q9Y5F2 RNU6-534P-201ENST00000364877 106 ntBASIC7.67□□□□□ -1.18
PCDHB11Q9Y5F2 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
PCDHB11Q9Y5F2 SNORA7B-201ENST00000384360 139 ntBASIC7.67□□□□□ -1.18
PCDHB11Q9Y5F2 MIR181C-201ENST00000384881 110 ntBASIC7.67□□□□□ -1.18
PCDHB11Q9Y5F2 AAMDC-202ENST00000393427 531 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
PCDHB11Q9Y5F2 LINC00993-201ENST00000420453 540 ntBASIC7.67□□□□□ -1.18
PCDHB11Q9Y5F2 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC7.67□□□□□ -1.18
PCDHB11Q9Y5F2 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC7.67□□□□□ -1.18
PCDHB11Q9Y5F2 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC7.67□□□□□ -1.18
PCDHB11Q9Y5F2 AC073464.1-201ENST00000429823 534 ntBASIC7.67□□□□□ -1.18
PCDHB11Q9Y5F2 MTCYBP45-201ENST00000435243 565 ntBASIC7.67□□□□□ -1.18
PCDHB11Q9Y5F2 AL138787.1-202ENST00000437804 898 ntBASIC7.67□□□□□ -1.18
PCDHB11Q9Y5F2 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC7.67□□□□□ -1.18
PCDHB11Q9Y5F2 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC7.67□□□□□ -1.18
PCDHB11Q9Y5F2 AC239798.1-201ENST00000449024 1176 ntBASIC7.67□□□□□ -1.18
PCDHB11Q9Y5F2 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC7.67□□□□□ -1.18
PCDHB11Q9Y5F2 VDAC2P4-201ENST00000452925 711 ntBASIC7.67□□□□□ -1.18
PCDHB11Q9Y5F2 BX322784.1-201ENST00000455793 1077 ntBASIC7.67□□□□□ -1.18
PCDHB11Q9Y5F2 AC080129.1-201ENST00000457815 406 ntTSL 3 BASIC7.67□□□□□ -1.18
PCDHB11Q9Y5F2 OR52A4P-201ENST00000472867 958 ntBASIC7.67□□□□□ -1.18
PCDHB11Q9Y5F2 RN7SL89P-201ENST00000480252 283 ntBASIC7.67□□□□□ -1.18
PCDHB11Q9Y5F2 RN7SL338P-201ENST00000481467 293 ntBASIC7.67□□□□□ -1.18
PCDHB11Q9Y5F2 ALG13-214ENST00000482742 620 ntTSL 2 BASIC7.67□□□□□ -1.18
PCDHB11Q9Y5F2 AC114300.1-201ENST00000502347 280 ntBASIC7.67□□□□□ -1.18
PCDHB11Q9Y5F2 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC7.67□□□□□ -1.18
PCDHB11Q9Y5F2 RNU6-430P-201ENST00000517078 107 ntBASIC7.67□□□□□ -1.18
PCDHB11Q9Y5F2 AC011726.3-201ENST00000518031 568 ntTSL 4 BASIC7.67□□□□□ -1.18
PCDHB11Q9Y5F2 IGKV3D-31-201ENST00000519131 281 ntBASIC7.67□□□□□ -1.18
PCDHB11Q9Y5F2 IGHV7-40-201ENST00000520963 296 ntBASIC7.67□□□□□ -1.18
PCDHB11Q9Y5F2 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC7.67□□□□□ -1.18
PCDHB11Q9Y5F2 AAMDC-203ENST00000525034 511 ntTSL 3 BASIC7.67□□□□□ -1.18
PCDHB11Q9Y5F2 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC7.67□□□□□ -1.18
PCDHB11Q9Y5F2 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
PCDHB11Q9Y5F2 AC069240.2-201ENST00000550242 609 ntBASIC7.67□□□□□ -1.18
PCDHB11Q9Y5F2 AC092133.1-201ENST00000565828 719 ntBASIC7.67□□□□□ -1.18
PCDHB11Q9Y5F2 AC137056.1-202ENST00000575772 753 ntTSL 2 BASIC7.67□□□□□ -1.18
PCDHB11Q9Y5F2 AC068014.1-201ENST00000576836 413 ntTSL 3 BASIC7.67□□□□□ -1.18
PCDHB11Q9Y5F2 MIR4685-201ENST00000578185 69 ntBASIC7.67□□□□□ -1.18
PCDHB11Q9Y5F2 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
PCDHB11Q9Y5F2 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC7.67□□□□□ -1.18
PCDHB11Q9Y5F2 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC7.67□□□□□ -1.18
PCDHB11Q9Y5F2 AL161729.4-201ENST00000604650 476 ntBASIC7.67□□□□□ -1.18
PCDHB11Q9Y5F2 AP000942.4-201ENST00000604811 241 ntBASIC7.67□□□□□ -1.18
PCDHB11Q9Y5F2 HNF4A-AS1-202ENST00000609152 413 ntTSL 3 BASIC7.67□□□□□ -1.18
PCDHB11Q9Y5F2 AL590282.1-201ENST00000610379 1136 ntBASIC7.67□□□□□ -1.18
PCDHB11Q9Y5F2 AC018692.2-201ENST00000624130 348 ntBASIC7.67□□□□□ -1.18
PCDHB11Q9Y5F2 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC7.67□□□□□ -1.18
PCDHB11Q9Y5F2 ABBA01000935.2-201ENST00000637477 838 ntBASIC7.67□□□□□ -1.18
PCDHB11Q9Y5F2 CAP1-201ENST00000340450 2592 ntAPPRIS ALT1 TSL 5 BASIC7.67□□□□□ -1.18
PCDHB11Q9Y5F2 BMX-203ENST00000357607 2598 ntAPPRIS P1 TSL 2 BASIC7.67□□□□□ -1.18
PCDHB11Q9Y5F2 SUPT20H-205ENST00000464744 2625 ntAPPRIS P3 TSL 2 BASIC7.67□□□□□ -1.18
PCDHB11Q9Y5F2 SLC9B1P1-201ENST00000331172 1337 ntBASIC7.67□□□□□ -1.18
PCDHB11Q9Y5F2 PIGN-221ENST00000638183 4046 ntTSL 5 BASIC7.67□□□□□ -1.18
PCDHB11Q9Y5F2 AC092725.2-201ENST00000567658 1389 ntBASIC7.67□□□□□ -1.18
PCDHB11Q9Y5F2 CSDE1-214ENST00000530886 3459 ntTSL 5 BASIC7.67□□□□□ -1.18
PCDHB11Q9Y5F2 ZNF19-210ENST00000567225 2838 ntTSL 3 BASIC7.67□□□□□ -1.18
PCDHB11Q9Y5F2 AL022578.1-201ENST00000439330 1433 ntBASIC7.67□□□□□ -1.18
PCDHB11Q9Y5F2 TRIM49-202ENST00000532501 1437 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
PCDHB11Q9Y5F2 UBE2V2-207ENST00000523111 4373 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
PCDHB11Q9Y5F2 AMPD3-202ENST00000396553 3680 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
PCDHB11Q9Y5F2 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
PCDHB11Q9Y5F2 CDK15-203ENST00000434439 2240 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
PCDHB11Q9Y5F2 SAP18-207ENST00000607003 2234 ntAPPRIS ALT1 TSL 1 (best) BASIC7.67□□□□□ -1.18
PCDHB11Q9Y5F2 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC7.67□□□□□ -1.18
PCDHB11Q9Y5F2 AL034370.1-201ENST00000397254 1590 ntBASIC7.67□□□□□ -1.18
PCDHB11Q9Y5F2 COX7C-203ENST00000509578 1584 ntAPPRIS P2 TSL 1 (best) BASIC7.67□□□□□ -1.18
PCDHB11Q9Y5F2 BX284613.1-201ENST00000452221 1641 ntBASIC7.67□□□□□ -1.18
PCDHB11Q9Y5F2 PHF6-202ENST00000370799 4186 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
PCDHB11Q9Y5F2 AC007998.4-201ENST00000612496 2533 ntBASIC7.67□□□□□ -1.18
PCDHB11Q9Y5F2 MAPK10-319ENST00000641459 2542 ntBASIC7.67□□□□□ -1.18
PCDHB11Q9Y5F2 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC7.66□□□□□ -1.18
PCDHB11Q9Y5F2 CLDN12-201ENST00000287916 3565 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
PCDHB11Q9Y5F2 PICALM-201ENST00000356360 1958 ntTSL 5 BASIC7.66□□□□□ -1.18
PCDHB11Q9Y5F2 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC7.66□□□□□ -1.18
PCDHB11Q9Y5F2 OPALIN-203ENST00000393871 3545 ntTSL 2 BASIC7.66□□□□□ -1.18
PCDHB11Q9Y5F2 RABEP1-201ENST00000341923 2490 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
PCDHB11Q9Y5F2 OR4K15-201ENST00000305051 1216 ntBASIC7.66□□□□□ -1.18
PCDHB11Q9Y5F2 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
PCDHB11Q9Y5F2 RNU6-1339P-201ENST00000363574 91 ntBASIC7.66□□□□□ -1.18
PCDHB11Q9Y5F2 Y_RNA.295-201ENST00000364918 102 ntBASIC7.66□□□□□ -1.18
PCDHB11Q9Y5F2 Y_RNA.296-201ENST00000364930 108 ntBASIC7.66□□□□□ -1.18
PCDHB11Q9Y5F2 RNA5SP355-201ENST00000365317 135 ntBASIC7.66□□□□□ -1.18
PCDHB11Q9Y5F2 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
PCDHB11Q9Y5F2 RPL31P1-201ENST00000398116 372 ntBASIC7.66□□□□□ -1.18
PCDHB11Q9Y5F2 RPL5P35-201ENST00000398869 816 ntBASIC7.66□□□□□ -1.18
PCDHB11Q9Y5F2 CALM2P3-201ENST00000400429 449 ntBASIC7.66□□□□□ -1.18
PCDHB11Q9Y5F2 COX6A1P3-201ENST00000404167 293 ntBASIC7.66□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms