Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC8.73□□□□□ -1.01
ZC3H4Q9UPT8 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC8.73□□□□□ -1.01
ZC3H4Q9UPT8 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC8.73□□□□□ -1.01
ZC3H4Q9UPT8 AC026458.1-201ENST00000564330 438 ntBASIC8.73□□□□□ -1.01
ZC3H4Q9UPT8 AC104581.3-201ENST00000573621 348 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
ZC3H4Q9UPT8 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC8.73□□□□□ -1.01
ZC3H4Q9UPT8 BNIP3P33-201ENST00000598912 569 ntBASIC8.73□□□□□ -1.01
ZC3H4Q9UPT8 AC068726.1-201ENST00000610993 341 ntBASIC8.73□□□□□ -1.01
ZC3H4Q9UPT8 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
ZC3H4Q9UPT8 AC005840.5-201ENST00000619166 599 ntBASIC8.73□□□□□ -1.01
ZC3H4Q9UPT8 PTP4A1-206ENST00000627002 447 ntTSL 5 BASIC8.73□□□□□ -1.01
ZC3H4Q9UPT8 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC8.73□□□□□ -1.01
ZC3H4Q9UPT8 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
ZC3H4Q9UPT8 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
ZC3H4Q9UPT8 LINC01808-202ENST00000641680 1116 ntBASIC8.73□□□□□ -1.01
ZC3H4Q9UPT8 LY75-CD302-201ENST00000504764 5650 ntAPPRIS P4 TSL 2 BASIC8.73□□□□□ -1.01
ZC3H4Q9UPT8 LIMCH1-216ENST00000512820 5071 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
ZC3H4Q9UPT8 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC8.73□□□□□ -1.01
ZC3H4Q9UPT8 KRT23-202ENST00000436344 1485 ntTSL 2 BASIC8.73□□□□□ -1.01
ZC3H4Q9UPT8 ENTPD5-201ENST00000334696 5842 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
ZC3H4Q9UPT8 AL355852.1-201ENST00000454081 1771 ntBASIC8.72□□□□□ -1.01
ZC3H4Q9UPT8 FAM135B-204ENST00000395297 6962 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
ZC3H4Q9UPT8 RTL9-201ENST00000465301 5426 ntAPPRIS P2 TSL 1 (best) BASIC8.72□□□□□ -1.01
ZC3H4Q9UPT8 AC025040.2-201ENST00000558657 1852 ntBASIC8.72□□□□□ -1.01
ZC3H4Q9UPT8 SPTLC3-201ENST00000399002 6169 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
ZC3H4Q9UPT8 SLC23A2-201ENST00000338244 6944 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
ZC3H4Q9UPT8 WNK1-220ENST00000574564 1401 ntBASIC8.72□□□□□ -1.01
ZC3H4Q9UPT8 MEF2A-201ENST00000338042 5464 ntAPPRIS ALT1 TSL 2 BASIC8.72□□□□□ -1.01
ZC3H4Q9UPT8 NCKAP1-202ENST00000361354 20347 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
ZC3H4Q9UPT8 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC8.72□□□□□ -1.01
ZC3H4Q9UPT8 KAT6A-203ENST00000406337 9241 ntAPPRIS P3 TSL 5 BASIC8.72□□□□□ -1.01
ZC3H4Q9UPT8 CLDN12-201ENST00000287916 3565 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
ZC3H4Q9UPT8 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC8.72□□□□□ -1.01
ZC3H4Q9UPT8 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC8.72□□□□□ -1.01
ZC3H4Q9UPT8 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
ZC3H4Q9UPT8 RAI14-205ENST00000503673 3339 ntAPPRIS P1 TSL 2 BASIC8.72□□□□□ -1.01
ZC3H4Q9UPT8 UEVLD-205ENST00000396197 4156 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
ZC3H4Q9UPT8 AL031594.1-201ENST00000417123 1932 ntTSL 2 BASIC8.72□□□□□ -1.01
ZC3H4Q9UPT8 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
ZC3H4Q9UPT8 WDCP-202ENST00000406895 3700 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
ZC3H4Q9UPT8 RNU1-87P-201ENST00000363727 170 ntBASIC8.72□□□□□ -1.01
ZC3H4Q9UPT8 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
ZC3H4Q9UPT8 FDPSP5-201ENST00000399474 1057 ntBASIC8.72□□□□□ -1.01
ZC3H4Q9UPT8 AC136624.1-201ENST00000400791 413 ntBASIC8.72□□□□□ -1.01
ZC3H4Q9UPT8 BTF3P7-201ENST00000407097 488 ntBASIC8.72□□□□□ -1.01
ZC3H4Q9UPT8 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC8.72□□□□□ -1.01
ZC3H4Q9UPT8 MED14P1-201ENST00000430517 648 ntBASIC8.72□□□□□ -1.01
ZC3H4Q9UPT8 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC8.72□□□□□ -1.01
ZC3H4Q9UPT8 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
ZC3H4Q9UPT8 AC122718.1-201ENST00000439448 744 ntBASIC8.72□□□□□ -1.01
ZC3H4Q9UPT8 GAPDHP37-201ENST00000442317 968 ntBASIC8.72□□□□□ -1.01
ZC3H4Q9UPT8 POU5F1P5-201ENST00000445059 658 ntBASIC8.72□□□□□ -1.01
ZC3H4Q9UPT8 AL020997.1-201ENST00000446554 349 ntBASIC8.72□□□□□ -1.01
ZC3H4Q9UPT8 AC114755.5-201ENST00000447760 831 ntBASIC8.72□□□□□ -1.01
ZC3H4Q9UPT8 AC097359.1-201ENST00000447946 463 ntBASIC8.72□□□□□ -1.01
ZC3H4Q9UPT8 AL096803.1-201ENST00000456921 1021 ntBASIC8.72□□□□□ -1.01
ZC3H4Q9UPT8 FAM133DP-201ENST00000464802 691 ntBASIC8.72□□□□□ -1.01
ZC3H4Q9UPT8 SETP11-201ENST00000473027 690 ntBASIC8.72□□□□□ -1.01
ZC3H4Q9UPT8 AC016687.1-201ENST00000482574 353 ntBASIC8.72□□□□□ -1.01
ZC3H4Q9UPT8 RN7SL214P-201ENST00000487317 265 ntBASIC8.72□□□□□ -1.01
ZC3H4Q9UPT8 RPS27P20-201ENST00000492051 246 ntBASIC8.72□□□□□ -1.01
ZC3H4Q9UPT8 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC8.72□□□□□ -1.01
ZC3H4Q9UPT8 AC008967.1-201ENST00000504843 163 ntBASIC8.72□□□□□ -1.01
ZC3H4Q9UPT8 AC011411.1-201ENST00000509592 876 ntBASIC8.72□□□□□ -1.01
ZC3H4Q9UPT8 AC116347.2-201ENST00000514912 523 ntBASIC8.72□□□□□ -1.01
ZC3H4Q9UPT8 MTCYBP19-201ENST00000517463 1124 ntBASIC8.72□□□□□ -1.01
ZC3H4Q9UPT8 IGKV3D-34-201ENST00000522638 302 ntBASIC8.72□□□□□ -1.01
ZC3H4Q9UPT8 MTCO3P15-201ENST00000526563 574 ntBASIC8.72□□□□□ -1.01
ZC3H4Q9UPT8 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC8.72□□□□□ -1.01
ZC3H4Q9UPT8 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC8.72□□□□□ -1.01
ZC3H4Q9UPT8 AL121579.1-201ENST00000555129 305 ntBASIC8.72□□□□□ -1.01
ZC3H4Q9UPT8 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC8.72□□□□□ -1.01
ZC3H4Q9UPT8 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC8.72□□□□□ -1.01
ZC3H4Q9UPT8 STX8-209ENST00000574431 731 ntTSL 3 BASIC8.72□□□□□ -1.01
ZC3H4Q9UPT8 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
ZC3H4Q9UPT8 DYNLL1P1-201ENST00000595442 269 ntBASIC8.72□□□□□ -1.01
ZC3H4Q9UPT8 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
ZC3H4Q9UPT8 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC8.72□□□□□ -1.01
ZC3H4Q9UPT8 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC8.72□□□□□ -1.01
ZC3H4Q9UPT8 AP005329.3-201ENST00000609924 686 ntBASIC8.72□□□□□ -1.01
ZC3H4Q9UPT8 AC016717.3-201ENST00000624730 554 ntBASIC8.72□□□□□ -1.01
ZC3H4Q9UPT8 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC8.72□□□□□ -1.01
ZC3H4Q9UPT8 CRNDE-214ENST00000637011 865 ntTSL 5 BASIC8.72□□□□□ -1.01
ZC3H4Q9UPT8 AC099654.12-201ENST00000639868 649 ntBASIC8.72□□□□□ -1.01
ZC3H4Q9UPT8 PDZK1P1-202ENST00000425209 1350 ntBASIC8.72□□□□□ -1.01
ZC3H4Q9UPT8 SERPINB8-203ENST00000397985 3477 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
ZC3H4Q9UPT8 WDR19-207ENST00000506503 2513 ntTSL 2 BASIC8.72□□□□□ -1.01
ZC3H4Q9UPT8 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
ZC3H4Q9UPT8 SYT1-212ENST00000552744 2718 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
ZC3H4Q9UPT8 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC8.72□□□□□ -1.01
ZC3H4Q9UPT8 TMEM200A-203ENST00000545622 2918 ntAPPRIS P1 TSL 2 BASIC8.72□□□□□ -1.01
ZC3H4Q9UPT8 AL049647.1-201ENST00000319682 1789 ntTSL 2 BASIC8.72□□□□□ -1.01
ZC3H4Q9UPT8 COX10-AS1-201ENST00000423323 3000 ntTSL 2 BASIC8.72□□□□□ -1.01
ZC3H4Q9UPT8 CDY2B-201ENST00000382867 1961 ntAPPRIS ALT1 BASIC8.72□□□□□ -1.01
ZC3H4Q9UPT8 MEF2C-217ENST00000510942 3446 ntTSL 5 BASIC8.72□□□□□ -1.01
ZC3H4Q9UPT8 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.01
ZC3H4Q9UPT8 AC008555.1-201ENST00000561778 2757 ntBASIC8.71□□□□□ -1.01
ZC3H4Q9UPT8 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC8.71□□□□□ -1.01
ZC3H4Q9UPT8 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
ZC3H4Q9UPT8 ENSA-204ENST00000356527 2546 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms