Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 PIGN-230ENST00000638977 4601 ntTSL 5 BASIC2.28□□□□□ -2.04
MACF1Q9UPN3 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
MACF1Q9UPN3 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC2.28□□□□□ -2.04
MACF1Q9UPN3 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC2.28□□□□□ -2.04
MACF1Q9UPN3 LECT2-203ENST00000512872 762 ntTSL 5 BASIC2.28□□□□□ -2.04
MACF1Q9UPN3 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC2.28□□□□□ -2.04
MACF1Q9UPN3 RPEL1-201ENST00000441178 2130 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
MACF1Q9UPN3 GNB5-201ENST00000261837 8906 ntAPPRIS P3 TSL 5 BASIC2.28□□□□□ -2.04
MACF1Q9UPN3 PDE11A-201ENST00000286063 9275 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
MACF1Q9UPN3 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
MACF1Q9UPN3 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC2.28□□□□□ -2.04
MACF1Q9UPN3 MYH10-203ENST00000379980 7694 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
MACF1Q9UPN3 TRIM60P19-201ENST00000452879 1462 ntBASIC2.28□□□□□ -2.04
MACF1Q9UPN3 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
MACF1Q9UPN3 FAM182A-201ENST00000376398 5070 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
MACF1Q9UPN3 C9orf72-206ENST00000619707 3339 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
MACF1Q9UPN3 AL732292.1-201ENST00000426692 226 ntBASIC2.28□□□□□ -2.04
MACF1Q9UPN3 RPL7P28-201ENST00000437739 740 ntBASIC2.28□□□□□ -2.04
MACF1Q9UPN3 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
MACF1Q9UPN3 AC139365.2-201ENST00000517972 253 ntBASIC2.28□□□□□ -2.04
MACF1Q9UPN3 AC138701.1-201ENST00000524329 714 ntBASIC2.28□□□□□ -2.04
MACF1Q9UPN3 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC2.28□□□□□ -2.04
MACF1Q9UPN3 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC2.28□□□□□ -2.04
MACF1Q9UPN3 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC2.28□□□□□ -2.04
MACF1Q9UPN3 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
MACF1Q9UPN3 MS4A2-204ENST00000617306 3512 ntTSL 1 (best) BASIC2.28□□□□□ -2.05
MACF1Q9UPN3 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.05
MACF1Q9UPN3 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC2.28□□□□□ -2.05
MACF1Q9UPN3 ZNF841-202ENST00000426391 3620 ntTSL 2 BASIC2.28□□□□□ -2.05
MACF1Q9UPN3 ZNF207-207ENST00000577908 4672 ntAPPRIS ALT1 TSL 5 BASIC2.28□□□□□ -2.05
MACF1Q9UPN3 ALPK1-203ENST00000458497 5410 ntAPPRIS P3 TSL 5 BASIC2.28□□□□□ -2.05
MACF1Q9UPN3 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC2.28□□□□□ -2.05
MACF1Q9UPN3 ETS1-202ENST00000392668 5139 ntTSL 1 (best) BASIC2.28□□□□□ -2.05
MACF1Q9UPN3 CSDE1-214ENST00000530886 3459 ntTSL 5 BASIC2.28□□□□□ -2.05
MACF1Q9UPN3 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC2.28□□□□□ -2.05
MACF1Q9UPN3 PSMC1P2-201ENST00000423961 1204 ntBASIC2.28□□□□□ -2.05
MACF1Q9UPN3 GCA-203ENST00000429691 824 ntTSL 3 BASIC2.28□□□□□ -2.05
MACF1Q9UPN3 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC2.28□□□□□ -2.05
MACF1Q9UPN3 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC2.28□□□□□ -2.05
MACF1Q9UPN3 GLRXP3-201ENST00000470810 321 ntBASIC2.28□□□□□ -2.05
MACF1Q9UPN3 RPL23AP68-201ENST00000480924 445 ntBASIC2.28□□□□□ -2.05
MACF1Q9UPN3 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC2.28□□□□□ -2.05
MACF1Q9UPN3 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC2.28□□□□□ -2.05
MACF1Q9UPN3 AC073529.1-202ENST00000608576 1080 ntTSL 5 BASIC2.28□□□□□ -2.05
MACF1Q9UPN3 SCARNA15.3-201ENST00000626315 122 ntBASIC2.28□□□□□ -2.05
MACF1Q9UPN3 SCARNA4.1-201ENST00000628597 123 ntBASIC2.28□□□□□ -2.05
MACF1Q9UPN3 AC006511.3-201ENST00000624929 1783 ntBASIC2.28□□□□□ -2.05
MACF1Q9UPN3 IL22RA2-201ENST00000296980 2886 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
MACF1Q9UPN3 LINC01588-202ENST00000528300 3208 ntTSL 2 BASIC2.27□□□□□ -2.05
MACF1Q9UPN3 AC233263.6-201ENST00000631132 1963 ntBASIC2.27□□□□□ -2.05
MACF1Q9UPN3 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
MACF1Q9UPN3 COL4A6-203ENST00000394872 6750 ntTSL 5 BASIC2.27□□□□□ -2.05
MACF1Q9UPN3 ANO3-201ENST00000256737 6642 ntAPPRIS P3 TSL 1 (best) BASIC2.27□□□□□ -2.05
MACF1Q9UPN3 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
MACF1Q9UPN3 FAM186A-203ENST00000543096 2116 ntAPPRIS ALT2 TSL 2 BASIC2.27□□□□□ -2.05
MACF1Q9UPN3 SVOP-205ENST00000610966 6813 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
MACF1Q9UPN3 POT1-201ENST00000357628 4080 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
MACF1Q9UPN3 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC2.27□□□□□ -2.05
MACF1Q9UPN3 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
MACF1Q9UPN3 AC105399.1-202ENST00000447303 205 ntBASIC2.27□□□□□ -2.05
MACF1Q9UPN3 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC2.27□□□□□ -2.05
MACF1Q9UPN3 AC055733.3-201ENST00000505214 523 ntBASIC2.27□□□□□ -2.05
MACF1Q9UPN3 IGKV1-32-201ENST00000519290 311 ntBASIC2.27□□□□□ -2.05
MACF1Q9UPN3 AC024940.3-201ENST00000538551 316 ntBASIC2.27□□□□□ -2.05
MACF1Q9UPN3 AC007224.1-201ENST00000564410 144 ntBASIC2.27□□□□□ -2.05
MACF1Q9UPN3 AL356218.2-201ENST00000605264 187 ntBASIC2.27□□□□□ -2.05
MACF1Q9UPN3 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC2.27□□□□□ -2.05
MACF1Q9UPN3 SP1-202ENST00000426431 7603 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
MACF1Q9UPN3 AC011294.1-202ENST00000451905 1947 ntTSL 2 BASIC2.27□□□□□ -2.05
MACF1Q9UPN3 ATP7B-206ENST00000448424 6404 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
MACF1Q9UPN3 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
MACF1Q9UPN3 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
MACF1Q9UPN3 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
MACF1Q9UPN3 SYNPO2-204ENST00000448416 4298 ntTSL 2 BASIC2.27□□□□□ -2.05
MACF1Q9UPN3 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
MACF1Q9UPN3 RNA5SP455-201ENST00000365190 119 ntBASIC2.27□□□□□ -2.05
MACF1Q9UPN3 NMD3P2-201ENST00000421815 761 ntBASIC2.27□□□□□ -2.05
MACF1Q9UPN3 MRPS21P2-201ENST00000424704 264 ntBASIC2.27□□□□□ -2.05
MACF1Q9UPN3 AL390879.2-203ENST00000426943 1121 ntBASIC2.27□□□□□ -2.05
MACF1Q9UPN3 AC093414.1-201ENST00000434712 514 ntBASIC2.27□□□□□ -2.05
MACF1Q9UPN3 AL157777.1-201ENST00000468100 304 ntBASIC2.27□□□□□ -2.05
MACF1Q9UPN3 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC2.27□□□□□ -2.05
MACF1Q9UPN3 RN7SKP13-201ENST00000515933 244 ntBASIC2.27□□□□□ -2.05
MACF1Q9UPN3 OR56A7P-201ENST00000524865 941 ntBASIC2.27□□□□□ -2.05
MACF1Q9UPN3 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC2.27□□□□□ -2.05
MACF1Q9UPN3 GLUD1P2-201ENST00000583339 201 ntBASIC2.27□□□□□ -2.05
MACF1Q9UPN3 AC131009.3-201ENST00000621809 287 ntBASIC2.27□□□□□ -2.05
MACF1Q9UPN3 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC2.27□□□□□ -2.05
MACF1Q9UPN3 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
MACF1Q9UPN3 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
MACF1Q9UPN3 WDR7-202ENST00000357574 7213 ntTSL 5 BASIC2.27□□□□□ -2.05
MACF1Q9UPN3 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
MACF1Q9UPN3 PAX5-201ENST00000358127 8615 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
MACF1Q9UPN3 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
MACF1Q9UPN3 RBM33-207ENST00000401878 10149 ntAPPRIS P2 TSL 5 BASIC2.27□□□□□ -2.05
MACF1Q9UPN3 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
MACF1Q9UPN3 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC2.27□□□□□ -2.05
MACF1Q9UPN3 SASH1-204ENST00000622663 5075 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
MACF1Q9UPN3 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC2.27□□□□□ -2.05
MACF1Q9UPN3 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 126 ms