Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 AC010325.3-201ENST00000641084 394 ntBASIC7.7□□□□□ -1.18
SYNGAP1Q96PV0 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
SYNGAP1Q96PV0 NBPF8-201ENST00000583271 5330 ntBASIC7.7□□□□□ -1.18
SYNGAP1Q96PV0 LINC01613-201ENST00000561476 2780 ntBASIC7.7□□□□□ -1.18
SYNGAP1Q96PV0 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
SYNGAP1Q96PV0 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC7.7□□□□□ -1.18
SYNGAP1Q96PV0 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
SYNGAP1Q96PV0 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
SYNGAP1Q96PV0 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC7.7□□□□□ -1.18
SYNGAP1Q96PV0 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
SYNGAP1Q96PV0 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
SYNGAP1Q96PV0 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
SYNGAP1Q96PV0 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC7.7□□□□□ -1.18
SYNGAP1Q96PV0 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC7.7□□□□□ -1.18
SYNGAP1Q96PV0 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
SYNGAP1Q96PV0 OR2AH1P-202ENST00000641232 2744 ntBASIC7.69□□□□□ -1.18
SYNGAP1Q96PV0 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
SYNGAP1Q96PV0 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC7.69□□□□□ -1.18
SYNGAP1Q96PV0 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
SYNGAP1Q96PV0 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
SYNGAP1Q96PV0 DDX43P1-201ENST00000510713 1763 ntBASIC7.69□□□□□ -1.18
SYNGAP1Q96PV0 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
SYNGAP1Q96PV0 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
SYNGAP1Q96PV0 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC7.69□□□□□ -1.18
SYNGAP1Q96PV0 AC099654.3-201ENST00000447087 1546 ntBASIC7.69□□□□□ -1.18
SYNGAP1Q96PV0 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC7.69□□□□□ -1.18
SYNGAP1Q96PV0 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
SYNGAP1Q96PV0 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
SYNGAP1Q96PV0 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
SYNGAP1Q96PV0 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
SYNGAP1Q96PV0 ST7-206ENST00000393447 2182 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
SYNGAP1Q96PV0 AC136624.1-201ENST00000400791 413 ntBASIC7.69□□□□□ -1.18
SYNGAP1Q96PV0 AL132875.1-201ENST00000403623 949 ntBASIC7.69□□□□□ -1.18
SYNGAP1Q96PV0 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC7.69□□□□□ -1.18
SYNGAP1Q96PV0 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC7.69□□□□□ -1.18
SYNGAP1Q96PV0 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
SYNGAP1Q96PV0 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC7.69□□□□□ -1.18
SYNGAP1Q96PV0 AC084290.1-201ENST00000434995 374 ntBASIC7.69□□□□□ -1.18
SYNGAP1Q96PV0 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC7.69□□□□□ -1.18
SYNGAP1Q96PV0 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC7.69□□□□□ -1.18
SYNGAP1Q96PV0 AC104978.1-201ENST00000449387 391 ntBASIC7.69□□□□□ -1.18
SYNGAP1Q96PV0 OR52J1P-201ENST00000450596 932 ntBASIC7.69□□□□□ -1.18
SYNGAP1Q96PV0 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC7.69□□□□□ -1.18
SYNGAP1Q96PV0 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC7.69□□□□□ -1.18
SYNGAP1Q96PV0 RPS4XP23-201ENST00000487801 237 ntBASIC7.69□□□□□ -1.18
SYNGAP1Q96PV0 RN7SL187P-201ENST00000495587 303 ntBASIC7.69□□□□□ -1.18
SYNGAP1Q96PV0 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC7.69□□□□□ -1.18
SYNGAP1Q96PV0 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC7.69□□□□□ -1.18
SYNGAP1Q96PV0 AC093870.1-201ENST00000506837 213 ntBASIC7.69□□□□□ -1.18
SYNGAP1Q96PV0 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
SYNGAP1Q96PV0 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC7.69□□□□□ -1.18
SYNGAP1Q96PV0 HSPD1P4-201ENST00000547203 1702 ntBASIC7.69□□□□□ -1.18
SYNGAP1Q96PV0 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC7.69□□□□□ -1.18
SYNGAP1Q96PV0 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC7.69□□□□□ -1.18
SYNGAP1Q96PV0 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC7.69□□□□□ -1.18
SYNGAP1Q96PV0 OR1E3-201ENST00000575608 948 ntBASIC7.69□□□□□ -1.18
SYNGAP1Q96PV0 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC7.69□□□□□ -1.18
SYNGAP1Q96PV0 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC7.69□□□□□ -1.18
SYNGAP1Q96PV0 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC7.69□□□□□ -1.18
SYNGAP1Q96PV0 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC7.69□□□□□ -1.18
SYNGAP1Q96PV0 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC7.69□□□□□ -1.18
SYNGAP1Q96PV0 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC7.69□□□□□ -1.18
SYNGAP1Q96PV0 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC7.69□□□□□ -1.18
SYNGAP1Q96PV0 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC7.69□□□□□ -1.18
SYNGAP1Q96PV0 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
SYNGAP1Q96PV0 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
SYNGAP1Q96PV0 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
SYNGAP1Q96PV0 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC7.69□□□□□ -1.18
SYNGAP1Q96PV0 ENO1P4-201ENST00000416471 1785 ntBASIC7.69□□□□□ -1.18
SYNGAP1Q96PV0 AC009135.2-201ENST00000624136 1768 ntBASIC7.69□□□□□ -1.18
SYNGAP1Q96PV0 YES1P1-201ENST00000418510 1628 ntBASIC7.69□□□□□ -1.18
SYNGAP1Q96PV0 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
SYNGAP1Q96PV0 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
SYNGAP1Q96PV0 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
SYNGAP1Q96PV0 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC7.68□□□□□ -1.18
SYNGAP1Q96PV0 UG0898H09-202ENST00000623646 7040 ntBASIC7.68□□□□□ -1.18
SYNGAP1Q96PV0 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
SYNGAP1Q96PV0 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC7.68□□□□□ -1.18
SYNGAP1Q96PV0 AL451064.2-201ENST00000623514 1654 ntBASIC7.68□□□□□ -1.18
SYNGAP1Q96PV0 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC7.68□□□□□ -1.18
SYNGAP1Q96PV0 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
SYNGAP1Q96PV0 SP140-205ENST00000420434 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
SYNGAP1Q96PV0 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
SYNGAP1Q96PV0 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
SYNGAP1Q96PV0 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC7.68□□□□□ -1.18
SYNGAP1Q96PV0 Y_RNA.194-201ENST00000363985 102 ntBASIC7.68□□□□□ -1.18
SYNGAP1Q96PV0 SNORD116-12-201ENST00000384468 92 ntBASIC7.68□□□□□ -1.18
SYNGAP1Q96PV0 PRELID1P1-201ENST00000403549 660 ntBASIC7.68□□□□□ -1.18
SYNGAP1Q96PV0 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC7.68□□□□□ -1.18
SYNGAP1Q96PV0 DEFB130D-201ENST00000426866 237 ntBASIC7.68□□□□□ -1.18
SYNGAP1Q96PV0 IFNNP1-201ENST00000429219 553 ntBASIC7.68□□□□□ -1.18
SYNGAP1Q96PV0 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
SYNGAP1Q96PV0 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
SYNGAP1Q96PV0 IGKV1OR10-1-201ENST00000442306 329 ntBASIC7.68□□□□□ -1.18
SYNGAP1Q96PV0 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC7.68□□□□□ -1.18
SYNGAP1Q96PV0 TPTE2P6-202ENST00000445572 1007 ntBASIC7.68□□□□□ -1.18
SYNGAP1Q96PV0 CEACAMP5-201ENST00000448037 961 ntBASIC7.68□□□□□ -1.18
SYNGAP1Q96PV0 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC7.68□□□□□ -1.18
SYNGAP1Q96PV0 IGKV1OR22-5-201ENST00000458718 354 ntBASIC7.68□□□□□ -1.18
SYNGAP1Q96PV0 GYG1P1-201ENST00000460864 698 ntBASIC7.68□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms