Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC5.53□□□□□ -1.52
LIM2P55344 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.53□□□□□ -1.52
LIM2P55344 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.53□□□□□ -1.52
LIM2P55344 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.53□□□□□ -1.52
LIM2P55344 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.53□□□□□ -1.52
LIM2P55344 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LIM2P55344 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.53□□□□□ -1.52
LIM2P55344 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.53□□□□□ -1.52
LIM2P55344 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
LIM2P55344 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LIM2P55344 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
LIM2P55344 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
LIM2P55344 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.53□□□□□ -1.52
LIM2P55344 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LIM2P55344 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
LIM2P55344 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
LIM2P55344 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LIM2P55344 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.52□□□□□ -1.53
LIM2P55344 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
LIM2P55344 FBXL21-201ENST00000297158 1305 ntBASIC5.52□□□□□ -1.53
LIM2P55344 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
LIM2P55344 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
LIM2P55344 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.52□□□□□ -1.53
LIM2P55344 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LIM2P55344 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
LIM2P55344 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
LIM2P55344 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LIM2P55344 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LIM2P55344 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
LIM2P55344 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.52□□□□□ -1.53
LIM2P55344 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
LIM2P55344 OR7E25P-201ENST00000344844 931 ntBASIC5.52□□□□□ -1.53
LIM2P55344 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LIM2P55344 U3.10-201ENST00000364459 214 ntBASIC5.52□□□□□ -1.53
LIM2P55344 RNA5SP500-201ENST00000364486 119 ntBASIC5.52□□□□□ -1.53
LIM2P55344 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
LIM2P55344 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC5.52□□□□□ -1.53
LIM2P55344 RAB5CP1-201ENST00000395972 580 ntBASIC5.52□□□□□ -1.53
LIM2P55344 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.52□□□□□ -1.53
LIM2P55344 RN7SKP29-201ENST00000410957 272 ntBASIC5.52□□□□□ -1.53
LIM2P55344 RN7SKP17-201ENST00000411242 351 ntBASIC5.52□□□□□ -1.53
LIM2P55344 AL035660.1-201ENST00000422041 222 ntBASIC5.52□□□□□ -1.53
LIM2P55344 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.52□□□□□ -1.53
LIM2P55344 AC126120.1-201ENST00000431082 470 ntBASIC5.52□□□□□ -1.53
LIM2P55344 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.52□□□□□ -1.53
LIM2P55344 AL138899.2-201ENST00000439139 499 ntBASIC5.52□□□□□ -1.53
LIM2P55344 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.52□□□□□ -1.53
LIM2P55344 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.52□□□□□ -1.53
LIM2P55344 NDUFA5P5-201ENST00000468361 342 ntBASIC5.52□□□□□ -1.53
LIM2P55344 AC078899.1-201ENST00000521432 1185 ntBASIC5.52□□□□□ -1.53
LIM2P55344 AP000648.1-201ENST00000529682 397 ntBASIC5.52□□□□□ -1.53
LIM2P55344 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.52□□□□□ -1.53
LIM2P55344 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
LIM2P55344 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
LIM2P55344 SETP3-201ENST00000581726 813 ntBASIC5.52□□□□□ -1.53
LIM2P55344 AC005726.4-201ENST00000582858 458 ntBASIC5.52□□□□□ -1.53
LIM2P55344 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.52□□□□□ -1.53
LIM2P55344 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.52□□□□□ -1.53
LIM2P55344 FAM27E4-201ENST00000605259 342 ntBASIC5.52□□□□□ -1.53
LIM2P55344 AL031601.1-201ENST00000605702 394 ntBASIC5.52□□□□□ -1.53
LIM2P55344 AC129915.3-201ENST00000634128 948 ntBASIC5.52□□□□□ -1.53
LIM2P55344 MIR1910-201ENST00000636955 80 ntBASIC5.52□□□□□ -1.53
LIM2P55344 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
LIM2P55344 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC5.52□□□□□ -1.53
LIM2P55344 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LIM2P55344 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
LIM2P55344 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
LIM2P55344 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
LIM2P55344 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LIM2P55344 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
LIM2P55344 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
LIM2P55344 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LIM2P55344 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.52□□□□□ -1.53
LIM2P55344 CCAT2-201ENST00000630920 1752 ntBASIC5.52□□□□□ -1.53
LIM2P55344 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LIM2P55344 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LIM2P55344 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.52□□□□□ -1.53
LIM2P55344 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.51□□□□□ -1.53
LIM2P55344 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
LIM2P55344 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.51□□□□□ -1.53
LIM2P55344 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LIM2P55344 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.51□□□□□ -1.53
LIM2P55344 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.51□□□□□ -1.53
LIM2P55344 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.51□□□□□ -1.53
LIM2P55344 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
LIM2P55344 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LIM2P55344 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
LIM2P55344 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
LIM2P55344 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.51□□□□□ -1.53
LIM2P55344 MFSD8-219ENST00000641228 2559 ntBASIC5.51□□□□□ -1.53
LIM2P55344 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
LIM2P55344 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.51□□□□□ -1.53
LIM2P55344 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
LIM2P55344 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
LIM2P55344 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.51□□□□□ -1.53
LIM2P55344 MRPL53P1-201ENST00000414323 319 ntBASIC5.51□□□□□ -1.53
LIM2P55344 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
LIM2P55344 CDY8P-201ENST00000428380 1279 ntBASIC5.51□□□□□ -1.53
LIM2P55344 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
LIM2P55344 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms