Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
CDH11P55287 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.53□□□□□ -1.52
CDH11P55287 AL162739.1-201ENST00000450606 307 ntBASIC5.53□□□□□ -1.52
CDH11P55287 HMGB1P7-201ENST00000450921 612 ntBASIC5.53□□□□□ -1.52
CDH11P55287 OR52Y1P-201ENST00000452418 828 ntBASIC5.53□□□□□ -1.52
CDH11P55287 RN7SL643P-201ENST00000471845 291 ntBASIC5.53□□□□□ -1.52
CDH11P55287 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CDH11P55287 RN7SL369P-201ENST00000477138 299 ntBASIC5.53□□□□□ -1.52
CDH11P55287 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.53□□□□□ -1.52
CDH11P55287 TRBV5-2-201ENST00000489095 273 ntBASIC5.53□□□□□ -1.52
CDH11P55287 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.53□□□□□ -1.52
CDH11P55287 TPM3P3-201ENST00000521343 354 ntBASIC5.53□□□□□ -1.52
CDH11P55287 AC008055.1-201ENST00000547032 609 ntBASIC5.53□□□□□ -1.52
CDH11P55287 DPPA3P2-202ENST00000557188 1219 ntBASIC5.53□□□□□ -1.52
CDH11P55287 HMGN2P47-201ENST00000559378 272 ntBASIC5.53□□□□□ -1.52
CDH11P55287 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC5.53□□□□□ -1.52
CDH11P55287 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.53□□□□□ -1.52
CDH11P55287 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC5.53□□□□□ -1.52
CDH11P55287 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.53□□□□□ -1.52
CDH11P55287 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC5.53□□□□□ -1.52
CDH11P55287 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.53□□□□□ -1.52
CDH11P55287 AC079315.1-201ENST00000602952 623 ntBASIC5.53□□□□□ -1.52
CDH11P55287 SNORA74.4-201ENST00000607595 199 ntBASIC5.53□□□□□ -1.52
CDH11P55287 AC007620.3-201ENST00000608131 497 ntBASIC5.53□□□□□ -1.52
CDH11P55287 AC003001.2-201ENST00000616294 831 ntBASIC5.53□□□□□ -1.52
CDH11P55287 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.53□□□□□ -1.52
CDH11P55287 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CDH11P55287 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC5.53□□□□□ -1.52
CDH11P55287 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.53□□□□□ -1.52
CDH11P55287 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.53□□□□□ -1.52
CDH11P55287 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.53□□□□□ -1.52
CDH11P55287 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.53□□□□□ -1.52
CDH11P55287 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.53□□□□□ -1.52
CDH11P55287 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CDH11P55287 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC5.53□□□□□ -1.52
CDH11P55287 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
CDH11P55287 AC092070.2-203ENST00000598377 3644 ntBASIC5.53□□□□□ -1.52
CDH11P55287 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
CDH11P55287 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC5.52□□□□□ -1.53
CDH11P55287 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
CDH11P55287 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
CDH11P55287 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
CDH11P55287 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CDH11P55287 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CDH11P55287 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CDH11P55287 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.52□□□□□ -1.53
CDH11P55287 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CDH11P55287 U3.23-201ENST00000391132 200 ntBASIC5.52□□□□□ -1.53
CDH11P55287 RN7SKP240-201ENST00000410583 375 ntBASIC5.52□□□□□ -1.53
CDH11P55287 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC5.52□□□□□ -1.53
CDH11P55287 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.52□□□□□ -1.53
CDH11P55287 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.52□□□□□ -1.53
CDH11P55287 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.52□□□□□ -1.53
CDH11P55287 KRT8P51-201ENST00000438938 274 ntBASIC5.52□□□□□ -1.53
CDH11P55287 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.52□□□□□ -1.53
CDH11P55287 GAPDHP23-201ENST00000444823 993 ntBASIC5.52□□□□□ -1.53
CDH11P55287 AL500527.1-201ENST00000448532 255 ntBASIC5.52□□□□□ -1.53
CDH11P55287 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC5.52□□□□□ -1.53
CDH11P55287 TPRKBP1-201ENST00000456243 481 ntBASIC5.52□□□□□ -1.53
CDH11P55287 SNRPCP3-201ENST00000474888 476 ntBASIC5.52□□□□□ -1.53
CDH11P55287 AC124945.1-201ENST00000485133 188 ntBASIC5.52□□□□□ -1.53
CDH11P55287 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.52□□□□□ -1.53
CDH11P55287 SNX18P24-201ENST00000505249 671 ntBASIC5.52□□□□□ -1.53
CDH11P55287 RNA5SP206-201ENST00000516703 121 ntBASIC5.52□□□□□ -1.53
CDH11P55287 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC5.52□□□□□ -1.53
CDH11P55287 AC244502.2-201ENST00000543361 851 ntBASIC5.52□□□□□ -1.53
CDH11P55287 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.52□□□□□ -1.53
CDH11P55287 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC5.52□□□□□ -1.53
CDH11P55287 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.52□□□□□ -1.53
CDH11P55287 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.52□□□□□ -1.53
CDH11P55287 NDUFA5P11-201ENST00000567995 343 ntBASIC5.52□□□□□ -1.53
CDH11P55287 AC023389.2-201ENST00000580031 955 ntBASIC5.52□□□□□ -1.53
CDH11P55287 RNU4ATAC-201ENST00000580972 127 ntBASIC5.52□□□□□ -1.53
CDH11P55287 AP001357.1-201ENST00000586304 1053 ntBASIC5.52□□□□□ -1.53
CDH11P55287 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.52□□□□□ -1.53
CDH11P55287 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC5.52□□□□□ -1.53
CDH11P55287 MIR6861-201ENST00000618657 64 ntBASIC5.52□□□□□ -1.53
CDH11P55287 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.52□□□□□ -1.53
CDH11P55287 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CDH11P55287 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
CDH11P55287 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CDH11P55287 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.52□□□□□ -1.53
CDH11P55287 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CDH11P55287 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CDH11P55287 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CDH11P55287 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CDH11P55287 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
CDH11P55287 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
CDH11P55287 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.52□□□□□ -1.53
CDH11P55287 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
CDH11P55287 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.51□□□□□ -1.53
CDH11P55287 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CDH11P55287 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.51□□□□□ -1.53
CDH11P55287 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
CDH11P55287 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
CDH11P55287 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CDH11P55287 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
CDH11P55287 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
CDH11P55287 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
CDH11P55287 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms