Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 ZNF736P8Y-201ENST00000451913 669 ntBASIC5.51□□□□□ -1.53
SOX2P48431 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC5.51□□□□□ -1.53
SOX2P48431 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC5.51□□□□□ -1.53
SOX2P48431 RPL7L1P3-201ENST00000455249 689 ntBASIC5.51□□□□□ -1.53
SOX2P48431 CTSLP6-201ENST00000458273 1002 ntBASIC5.51□□□□□ -1.53
SOX2P48431 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC5.51□□□□□ -1.53
SOX2P48431 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC5.51□□□□□ -1.53
SOX2P48431 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC5.51□□□□□ -1.53
SOX2P48431 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SOX2P48431 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.51□□□□□ -1.53
SOX2P48431 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.51□□□□□ -1.53
SOX2P48431 RPL7L1P7-201ENST00000509986 724 ntBASIC5.51□□□□□ -1.53
SOX2P48431 IGKV1D-32-201ENST00000517449 318 ntBASIC5.51□□□□□ -1.53
SOX2P48431 AC010476.1-201ENST00000519111 851 ntBASIC5.51□□□□□ -1.53
SOX2P48431 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC5.51□□□□□ -1.53
SOX2P48431 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC5.51□□□□□ -1.53
SOX2P48431 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC5.51□□□□□ -1.53
SOX2P48431 VDAC2P2-201ENST00000544463 901 ntBASIC5.51□□□□□ -1.53
SOX2P48431 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SOX2P48431 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SOX2P48431 AGGF1P9-201ENST00000561884 913 ntBASIC5.51□□□□□ -1.53
SOX2P48431 RN7SL426P-201ENST00000579106 295 ntBASIC5.51□□□□□ -1.53
SOX2P48431 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
SOX2P48431 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SOX2P48431 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC5.51□□□□□ -1.53
SOX2P48431 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC5.51□□□□□ -1.53
SOX2P48431 RPS11-205ENST00000599561 430 ntTSL 5 BASIC5.51□□□□□ -1.53
SOX2P48431 AC011492.1-201ENST00000600023 315 ntBASIC5.51□□□□□ -1.53
SOX2P48431 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC5.51□□□□□ -1.53
SOX2P48431 AC021851.1-201ENST00000608537 1082 ntBASIC5.51□□□□□ -1.53
SOX2P48431 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC5.51□□□□□ -1.53
SOX2P48431 MIR7854-201ENST00000620068 65 ntBASIC5.51□□□□□ -1.53
SOX2P48431 AC005514.1-201ENST00000623521 208 ntBASIC5.51□□□□□ -1.53
SOX2P48431 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC5.51□□□□□ -1.53
SOX2P48431 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC5.51□□□□□ -1.53
SOX2P48431 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC5.51□□□□□ -1.53
SOX2P48431 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.51□□□□□ -1.53
SOX2P48431 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SOX2P48431 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.51□□□□□ -1.53
SOX2P48431 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SOX2P48431 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SOX2P48431 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SOX2P48431 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SOX2P48431 SAMM50P1-201ENST00000455403 1399 ntBASIC5.51□□□□□ -1.53
SOX2P48431 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SOX2P48431 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
SOX2P48431 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SOX2P48431 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.51□□□□□ -1.53
SOX2P48431 HSPD1P1-201ENST00000503199 1726 ntBASIC5.51□□□□□ -1.53
SOX2P48431 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.51□□□□□ -1.53
SOX2P48431 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
SOX2P48431 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.5□□□□□ -1.53
SOX2P48431 SEPT7P7-201ENST00000420492 1301 ntBASIC5.5□□□□□ -1.53
SOX2P48431 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC5.5□□□□□ -1.53
SOX2P48431 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
SOX2P48431 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
SOX2P48431 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SOX2P48431 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
SOX2P48431 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
SOX2P48431 RNFT1P3-201ENST00000340898 1052 ntBASIC5.5□□□□□ -1.53
SOX2P48431 RNA5SP382-201ENST00000363355 112 ntBASIC5.5□□□□□ -1.53
SOX2P48431 RNA5SP140-201ENST00000364524 92 ntBASIC5.5□□□□□ -1.53
SOX2P48431 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.5□□□□□ -1.53
SOX2P48431 TINAG-202ENST00000370864 692 ntTSL 2 BASIC5.5□□□□□ -1.53
SOX2P48431 AL121835.1-201ENST00000404250 354 ntBASIC5.5□□□□□ -1.53
SOX2P48431 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5.5□□□□□ -1.53
SOX2P48431 RPS26P38-201ENST00000414476 348 ntBASIC5.5□□□□□ -1.53
SOX2P48431 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC5.5□□□□□ -1.53
SOX2P48431 TCEA1P2-201ENST00000420496 906 ntBASIC5.5□□□□□ -1.53
SOX2P48431 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.5□□□□□ -1.53
SOX2P48431 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.5□□□□□ -1.53
SOX2P48431 AC016027.5-201ENST00000427227 210 ntBASIC5.5□□□□□ -1.53
SOX2P48431 TRBV29OR9-2-201ENST00000427589 333 ntBASIC5.5□□□□□ -1.53
SOX2P48431 RPL3P11-201ENST00000434028 1146 ntBASIC5.5□□□□□ -1.53
SOX2P48431 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC5.5□□□□□ -1.53
SOX2P48431 AC006994.1-201ENST00000438212 839 ntBASIC5.5□□□□□ -1.53
SOX2P48431 AL121578.2-201ENST00000448797 447 ntBASIC5.5□□□□□ -1.53
SOX2P48431 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC5.5□□□□□ -1.53
SOX2P48431 AC069277.2-201ENST00000454211 432 ntBASIC5.5□□□□□ -1.53
SOX2P48431 AL139824.2-201ENST00000458731 1095 ntBASIC5.5□□□□□ -1.53
SOX2P48431 AC069306.1-201ENST00000507006 843 ntBASIC5.5□□□□□ -1.53
SOX2P48431 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SOX2P48431 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC5.5□□□□□ -1.53
SOX2P48431 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC5.5□□□□□ -1.53
SOX2P48431 AC118942.1-201ENST00000529674 1035 ntBASIC5.5□□□□□ -1.53
SOX2P48431 AP001372.3-201ENST00000530510 609 ntTSL 2 BASIC5.5□□□□□ -1.53
SOX2P48431 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.5□□□□□ -1.53
SOX2P48431 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC5.5□□□□□ -1.53
SOX2P48431 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC5.5□□□□□ -1.53
SOX2P48431 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC5.5□□□□□ -1.53
SOX2P48431 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC5.5□□□□□ -1.53
SOX2P48431 HMGN2P47-201ENST00000559378 272 ntBASIC5.5□□□□□ -1.53
SOX2P48431 HNRNPA1P74-201ENST00000560782 835 ntBASIC5.5□□□□□ -1.53
SOX2P48431 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.5□□□□□ -1.53
SOX2P48431 AC010287.1-201ENST00000566916 357 ntBASIC5.5□□□□□ -1.53
SOX2P48431 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.5□□□□□ -1.53
SOX2P48431 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC5.5□□□□□ -1.53
SOX2P48431 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SOX2P48431 MTCO2P2-201ENST00000591258 225 ntBASIC5.5□□□□□ -1.53
SOX2P48431 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms