Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC6.14□□□□□ -1.43
RETP07949 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.14□□□□□ -1.43
RETP07949 FO393422.1-201ENST00000603908 708 ntBASIC6.14□□□□□ -1.43
RETP07949 AC241377.1-201ENST00000619797 406 ntBASIC6.14□□□□□ -1.43
RETP07949 MRPL57P1-201ENST00000621486 265 ntBASIC6.14□□□□□ -1.43
RETP07949 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
RETP07949 AC027279.4-201ENST00000624371 2072 ntBASIC6.14□□□□□ -1.43
RETP07949 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.14□□□□□ -1.43
RETP07949 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.14□□□□□ -1.43
RETP07949 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC6.14□□□□□ -1.43
RETP07949 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RETP07949 AL592429.1-201ENST00000403909 1473 ntBASIC6.14□□□□□ -1.43
RETP07949 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RETP07949 AC120036.2-201ENST00000509729 1474 ntBASIC6.14□□□□□ -1.43
RETP07949 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.14□□□□□ -1.43
RETP07949 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.14□□□□□ -1.43
RETP07949 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RETP07949 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.14□□□□□ -1.43
RETP07949 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC6.13□□□□□ -1.43
RETP07949 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
RETP07949 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RETP07949 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RETP07949 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
RETP07949 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RETP07949 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.13□□□□□ -1.43
RETP07949 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.13□□□□□ -1.43
RETP07949 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.13□□□□□ -1.43
RETP07949 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
RETP07949 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
RETP07949 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
RETP07949 RNU1-49P-201ENST00000363468 159 ntBASIC6.13□□□□□ -1.43
RETP07949 NPM1P4-201ENST00000414095 812 ntBASIC6.13□□□□□ -1.43
RETP07949 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.13□□□□□ -1.43
RETP07949 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC6.13□□□□□ -1.43
RETP07949 DEFA9P-201ENST00000433042 285 ntBASIC6.13□□□□□ -1.43
RETP07949 AC002504.1-201ENST00000438281 691 ntBASIC6.13□□□□□ -1.43
RETP07949 MORF4-201ENST00000447135 971 ntBASIC6.13□□□□□ -1.43
RETP07949 AC093815.1-201ENST00000508637 280 ntBASIC6.13□□□□□ -1.43
RETP07949 AC106800.3-201ENST00000511389 308 ntBASIC6.13□□□□□ -1.43
RETP07949 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC6.13□□□□□ -1.43
RETP07949 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.13□□□□□ -1.43
RETP07949 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC6.13□□□□□ -1.43
RETP07949 AL136131.3-201ENST00000607600 188 ntBASIC6.13□□□□□ -1.43
RETP07949 AC079395.2-201ENST00000610982 737 ntBASIC6.13□□□□□ -1.43
RETP07949 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RETP07949 AL445649.1-201ENST00000615941 691 ntBASIC6.13□□□□□ -1.43
RETP07949 MIR7159-201ENST00000620587 66 ntBASIC6.13□□□□□ -1.43
RETP07949 AL132640.3-201ENST00000630473 177 ntBASIC6.13□□□□□ -1.43
RETP07949 CASC19-222ENST00000641321 1173 ntBASIC6.13□□□□□ -1.43
RETP07949 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
RETP07949 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.13□□□□□ -1.43
RETP07949 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC6.13□□□□□ -1.43
RETP07949 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC6.13□□□□□ -1.43
RETP07949 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC6.13□□□□□ -1.43
RETP07949 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RETP07949 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC6.13□□□□□ -1.43
RETP07949 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
RETP07949 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
RETP07949 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RETP07949 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
RETP07949 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RETP07949 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RETP07949 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.12□□□□□ -1.43
RETP07949 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.12□□□□□ -1.43
RETP07949 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
RETP07949 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
RETP07949 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
RETP07949 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.12□□□□□ -1.43
RETP07949 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RETP07949 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
RETP07949 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.12□□□□□ -1.43
RETP07949 AC012078.1-201ENST00000405035 1646 ntBASIC6.12□□□□□ -1.43
RETP07949 Y_RNA.625-201ENST00000411256 107 ntBASIC6.12□□□□□ -1.43
RETP07949 AP000534.2-201ENST00000412729 568 ntBASIC6.12□□□□□ -1.43
RETP07949 PTMAP6-201ENST00000439110 327 ntBASIC6.12□□□□□ -1.43
RETP07949 SPRYD7P1-201ENST00000443861 570 ntBASIC6.12□□□□□ -1.43
RETP07949 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
RETP07949 OFD1P8Y-201ENST00000449148 1433 ntBASIC6.12□□□□□ -1.43
RETP07949 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC6.12□□□□□ -1.43
RETP07949 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RETP07949 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RETP07949 SIAH1P1-201ENST00000479411 923 ntBASIC6.12□□□□□ -1.43
RETP07949 AC108693.1-201ENST00000496068 432 ntBASIC6.12□□□□□ -1.43
RETP07949 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.12□□□□□ -1.43
RETP07949 SNORA70.20-201ENST00000516848 126 ntBASIC6.12□□□□□ -1.43
RETP07949 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC6.12□□□□□ -1.43
RETP07949 APPL2-203ENST00000546731 684 ntTSL 2 BASIC6.12□□□□□ -1.43
RETP07949 AL121579.2-201ENST00000555466 590 ntBASIC6.12□□□□□ -1.43
RETP07949 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RETP07949 MIR4776-2-201ENST00000580204 80 ntBASIC6.12□□□□□ -1.43
RETP07949 MIR4505-201ENST00000582238 73 ntBASIC6.12□□□□□ -1.43
RETP07949 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC6.12□□□□□ -1.43
RETP07949 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RETP07949 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RETP07949 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.12□□□□□ -1.43
RETP07949 CCL14-204ENST00000622526 472 ntTSL 3 BASIC6.12□□□□□ -1.43
RETP07949 AL353684.1-201ENST00000622677 1120 ntBASIC6.12□□□□□ -1.43
RETP07949 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.12□□□□□ -1.43
RETP07949 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RETP07949 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms