Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 AC023598.1-201ENST00000472521 361 ntBASIC8.62□□□□□ -1.03
RNF40O75150 RPL23AP82-208ENST00000496652 1112 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
RNF40O75150 AC114964.1-201ENST00000502306 1111 ntBASIC8.62□□□□□ -1.03
RNF40O75150 AL031073.1-201ENST00000503029 1139 ntBASIC8.62□□□□□ -1.03
RNF40O75150 RN7SKP13-201ENST00000515933 244 ntBASIC8.62□□□□□ -1.03
RNF40O75150 RNU6ATAC39P-201ENST00000516309 149 ntBASIC8.62□□□□□ -1.03
RNF40O75150 RNU6-1046P-201ENST00000516538 107 ntBASIC8.62□□□□□ -1.03
RNF40O75150 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC8.62□□□□□ -1.03
RNF40O75150 AP002957.1-201ENST00000525952 406 ntTSL 3 BASIC8.62□□□□□ -1.03
RNF40O75150 LINC02443-201ENST00000536518 585 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
RNF40O75150 NXPE2P1-201ENST00000543705 726 ntBASIC8.62□□□□□ -1.03
RNF40O75150 AC079598.4-201ENST00000549647 265 ntBASIC8.62□□□□□ -1.03
RNF40O75150 SRMP2-201ENST00000553832 916 ntBASIC8.62□□□□□ -1.03
RNF40O75150 OTX2-204ENST00000554788 835 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
RNF40O75150 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC8.62□□□□□ -1.03
RNF40O75150 AC009119.1-204ENST00000561599 564 ntTSL 4 BASIC8.62□□□□□ -1.03
RNF40O75150 C16orf45-203ENST00000561692 534 ntTSL 3 BASIC8.62□□□□□ -1.03
RNF40O75150 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC8.62□□□□□ -1.03
RNF40O75150 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC8.62□□□□□ -1.03
RNF40O75150 AC006967.3-201ENST00000594086 1093 ntBASIC8.62□□□□□ -1.03
RNF40O75150 AC012511.1-201ENST00000608140 449 ntBASIC8.62□□□□□ -1.03
RNF40O75150 AC018692.2-201ENST00000624130 348 ntBASIC8.62□□□□□ -1.03
RNF40O75150 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
RNF40O75150 AC134503.1-201ENST00000633048 54 ntBASIC8.62□□□□□ -1.03
RNF40O75150 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC8.62□□□□□ -1.03
RNF40O75150 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC8.62□□□□□ -1.03
RNF40O75150 AL353795.1-201ENST00000439134 1775 ntBASIC8.62□□□□□ -1.03
RNF40O75150 LINC02431-202ENST00000505329 1788 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
RNF40O75150 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
RNF40O75150 APP-206ENST00000359726 3294 ntTSL 2 BASIC8.62□□□□□ -1.03
RNF40O75150 GPM6B-205ENST00000454189 3957 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
RNF40O75150 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
RNF40O75150 HNRNPA2B1-201ENST00000354667 3664 ntAPPRIS ALT1 TSL 1 (best) BASIC8.62□□□□□ -1.03
RNF40O75150 PTPN3-201ENST00000262539 6832 ntTSL 5 BASIC8.62□□□□□ -1.03
RNF40O75150 MGAT4A-201ENST00000264968 8432 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
RNF40O75150 CCL28-201ENST00000361115 3126 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
RNF40O75150 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
RNF40O75150 SEC62-207ENST00000480708 1430 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
RNF40O75150 SHC4-203ENST00000537958 1447 ntTSL 2 BASIC8.62□□□□□ -1.03
RNF40O75150 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
RNF40O75150 UTP23-201ENST00000309822 3699 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
RNF40O75150 BCLAF1-223ENST00000628517 2512 ntTSL 5 BASIC8.61□□□□□ -1.03
RNF40O75150 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
RNF40O75150 RAB13-205ENST00000614713 1353 ntTSL 5 BASIC8.61□□□□□ -1.03
RNF40O75150 DYNC1I2P1-201ENST00000435916 1838 ntBASIC8.61□□□□□ -1.03
RNF40O75150 UGT2B24P-201ENST00000514441 1597 ntBASIC8.61□□□□□ -1.03
RNF40O75150 CAP1-206ENST00000372805 2217 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
RNF40O75150 DCAF13P1-201ENST00000495256 1330 ntBASIC8.61□□□□□ -1.03
RNF40O75150 MMGT1-201ENST00000305963 3738 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
RNF40O75150 HMGB1-203ENST00000341423 5485 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
RNF40O75150 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC8.61□□□□□ -1.03
RNF40O75150 CEACAMP3-201ENST00000473762 1548 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
RNF40O75150 FAM19A1-203ENST00000496687 1917 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
RNF40O75150 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
RNF40O75150 OR5P1P-201ENST00000299512 925 ntBASIC8.61□□□□□ -1.03
RNF40O75150 RPL21P132-201ENST00000331267 462 ntBASIC8.61□□□□□ -1.03
RNF40O75150 RNU6-331P-201ENST00000384724 107 ntBASIC8.61□□□□□ -1.03
RNF40O75150 MIR548P-201ENST00000408336 84 ntBASIC8.61□□□□□ -1.03
RNF40O75150 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC8.61□□□□□ -1.03
RNF40O75150 CHCHD3P1-201ENST00000425516 676 ntBASIC8.61□□□□□ -1.03
RNF40O75150 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC8.61□□□□□ -1.03
RNF40O75150 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
RNF40O75150 AC092170.1-201ENST00000440211 356 ntBASIC8.61□□□□□ -1.03
RNF40O75150 RPL29P7-201ENST00000440227 457 ntBASIC8.61□□□□□ -1.03
RNF40O75150 HMGB1P16-201ENST00000447155 540 ntBASIC8.61□□□□□ -1.03
RNF40O75150 ATP5G1P6-201ENST00000451206 412 ntBASIC8.61□□□□□ -1.03
RNF40O75150 OR52E7P-201ENST00000452394 933 ntBASIC8.61□□□□□ -1.03
RNF40O75150 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC8.61□□□□□ -1.03
RNF40O75150 AC091544.1-201ENST00000484702 348 ntBASIC8.61□□□□□ -1.03
RNF40O75150 LINC02024-203ENST00000496994 489 ntTSL 3 BASIC8.61□□□□□ -1.03
RNF40O75150 AC106822.1-201ENST00000502647 526 ntBASIC8.61□□□□□ -1.03
RNF40O75150 AC112184.1-201ENST00000505179 312 ntBASIC8.61□□□□□ -1.03
RNF40O75150 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC8.61□□□□□ -1.03
RNF40O75150 TPT1-AS1-214ENST00000521507 665 ntTSL 5 BASIC8.61□□□□□ -1.03
RNF40O75150 HSPA8P13-201ENST00000523715 472 ntBASIC8.61□□□□□ -1.03
RNF40O75150 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC8.61□□□□□ -1.03
RNF40O75150 ACER3-213ENST00000533873 929 ntTSL 2 BASIC8.61□□□□□ -1.03
RNF40O75150 AL512360.1-201ENST00000555346 234 ntBASIC8.61□□□□□ -1.03
RNF40O75150 AC037471.2-201ENST00000564941 598 ntBASIC8.61□□□□□ -1.03
RNF40O75150 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC8.61□□□□□ -1.03
RNF40O75150 AC018521.6-201ENST00000584276 335 ntTSL 5 BASIC8.61□□□□□ -1.03
RNF40O75150 HIGD1B-205ENST00000591513 547 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.03
RNF40O75150 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC8.61□□□□□ -1.03
RNF40O75150 SUGT1P3-202ENST00000604259 383 ntBASIC8.61□□□□□ -1.03
RNF40O75150 TAS2R6P-201ENST00000605022 826 ntBASIC8.61□□□□□ -1.03
RNF40O75150 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC8.61□□□□□ -1.03
RNF40O75150 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC8.61□□□□□ -1.03
RNF40O75150 Metazoa_SRP.29-201ENST00000616220 280 ntBASIC8.61□□□□□ -1.03
RNF40O75150 HTR1DP1-201ENST00000616500 888 ntBASIC8.61□□□□□ -1.03
RNF40O75150 AC099811.5-201ENST00000617211 819 ntTSL 5 BASIC8.61□□□□□ -1.03
RNF40O75150 AL603758.1-201ENST00000618654 241 ntBASIC8.61□□□□□ -1.03
RNF40O75150 AC010533.1-201ENST00000624875 2105 ntBASIC8.61□□□□□ -1.03
RNF40O75150 AC091953.4-201ENST00000625179 341 ntBASIC8.61□□□□□ -1.03
RNF40O75150 AOAH-208ENST00000612871 2336 ntAPPRIS ALT2 TSL 2 BASIC8.61□□□□□ -1.03
RNF40O75150 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
RNF40O75150 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
RNF40O75150 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC8.61□□□□□ -1.03
RNF40O75150 MAP3K7CL-203ENST00000341618 1855 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
RNF40O75150 C8orf37-201ENST00000286688 3334 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
RNF40O75150 ALS2-201ENST00000264276 6644 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms