Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC7.44□□□□□ -1.22
SOX1O00570 CKAP2L-201ENST00000302450 4533 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
SOX1O00570 ZNF268-213ENST00000542986 3773 ntTSL 5 BASIC7.44□□□□□ -1.22
SOX1O00570 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
SOX1O00570 AL109918.1-201ENST00000602367 3039 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
SOX1O00570 FCGR3B-209ENST00000614870 1993 ntTSL 5 BASIC7.44□□□□□ -1.22
SOX1O00570 VWA3A-202ENST00000389398 4600 ntAPPRIS P2 TSL 5 BASIC7.44□□□□□ -1.22
SOX1O00570 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC7.44□□□□□ -1.22
SOX1O00570 KIAA0100-201ENST00000389003 6852 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
SOX1O00570 RIPOR2-205ENST00000510784 3381 ntTSL 2 BASIC7.44□□□□□ -1.22
SOX1O00570 TTTY15-202ENST00000440408 5284 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
SOX1O00570 AL591379.1-201ENST00000315293 3739 ntTSL 2 BASIC7.44□□□□□ -1.22
SOX1O00570 LINC01234-202ENST00000547963 2088 ntTSL 2 BASIC7.44□□□□□ -1.22
SOX1O00570 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
SOX1O00570 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC7.44□□□□□ -1.22
SOX1O00570 LINC02035-201ENST00000610128 5476 ntBASIC7.44□□□□□ -1.22
SOX1O00570 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC7.44□□□□□ -1.22
SOX1O00570 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
SOX1O00570 SNORA68-201ENST00000384437 133 ntBASIC7.44□□□□□ -1.22
SOX1O00570 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
SOX1O00570 AL031577.2-201ENST00000404133 280 ntBASIC7.44□□□□□ -1.22
SOX1O00570 RNA5SP178-201ENST00000410380 128 ntBASIC7.44□□□□□ -1.22
SOX1O00570 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
SOX1O00570 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC7.44□□□□□ -1.22
SOX1O00570 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC7.44□□□□□ -1.22
SOX1O00570 MTCO2P34-201ENST00000421994 607 ntBASIC7.44□□□□□ -1.22
SOX1O00570 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC7.44□□□□□ -1.22
SOX1O00570 OFD1P13Y-201ENST00000431179 1232 ntBASIC7.44□□□□□ -1.22
SOX1O00570 AC009988.1-201ENST00000434988 310 ntTSL 5 BASIC7.44□□□□□ -1.22
SOX1O00570 HMGN1P6-201ENST00000438508 291 ntBASIC7.44□□□□□ -1.22
SOX1O00570 MTCYBP34-201ENST00000439552 670 ntBASIC7.44□□□□□ -1.22
SOX1O00570 COX4I1P2-201ENST00000447446 547 ntBASIC7.44□□□□□ -1.22
SOX1O00570 AC007327.1-201ENST00000447461 264 ntBASIC7.44□□□□□ -1.22
SOX1O00570 TPMTP4-201ENST00000450749 678 ntBASIC7.44□□□□□ -1.22
SOX1O00570 IGKV1OR2-2-201ENST00000451163 355 ntBASIC7.44□□□□□ -1.22
SOX1O00570 AC010878.1-201ENST00000456500 1047 ntBASIC7.44□□□□□ -1.22
SOX1O00570 GTF2IP12-201ENST00000456547 356 ntBASIC7.44□□□□□ -1.22
SOX1O00570 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC7.44□□□□□ -1.22
SOX1O00570 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC7.44□□□□□ -1.22
SOX1O00570 HPRT1P2-201ENST00000505250 544 ntBASIC7.44□□□□□ -1.22
SOX1O00570 ZNF721-203ENST00000506646 935 ntTSL 2 BASIC7.44□□□□□ -1.22
SOX1O00570 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
SOX1O00570 AC021001.1-201ENST00000518703 987 ntBASIC7.44□□□□□ -1.22
SOX1O00570 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC7.44□□□□□ -1.22
SOX1O00570 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC7.44□□□□□ -1.22
SOX1O00570 AP002963.1-201ENST00000530590 184 ntBASIC7.44□□□□□ -1.22
SOX1O00570 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC7.44□□□□□ -1.22
SOX1O00570 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC7.44□□□□□ -1.22
SOX1O00570 DUXAP1-201ENST00000556632 463 ntBASIC7.44□□□□□ -1.22
SOX1O00570 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
SOX1O00570 AC090651.1-201ENST00000567865 634 ntBASIC7.44□□□□□ -1.22
SOX1O00570 MIR3176-201ENST00000582210 90 ntBASIC7.44□□□□□ -1.22
SOX1O00570 MRPS5P4-201ENST00000592830 325 ntBASIC7.44□□□□□ -1.22
SOX1O00570 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC7.44□□□□□ -1.22
SOX1O00570 CLPTM1LP1-201ENST00000604519 484 ntBASIC7.44□□□□□ -1.22
SOX1O00570 HNRNPA3P9-201ENST00000604913 979 ntBASIC7.44□□□□□ -1.22
SOX1O00570 LARP7P1-201ENST00000605576 316 ntBASIC7.44□□□□□ -1.22
SOX1O00570 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC7.44□□□□□ -1.22
SOX1O00570 AL589743.6-201ENST00000611025 117 ntBASIC7.44□□□□□ -1.22
SOX1O00570 AC024941.1-201ENST00000612250 334 ntBASIC7.44□□□□□ -1.22
SOX1O00570 AP005212.3-201ENST00000619964 528 ntBASIC7.44□□□□□ -1.22
SOX1O00570 AC022140.2-201ENST00000623500 188 ntBASIC7.44□□□□□ -1.22
SOX1O00570 AC099667.1-201ENST00000624222 469 ntBASIC7.44□□□□□ -1.22
SOX1O00570 AC073488.6-201ENST00000632293 754 ntBASIC7.44□□□□□ -1.22
SOX1O00570 AC129915.3-201ENST00000634128 948 ntBASIC7.44□□□□□ -1.22
SOX1O00570 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC7.44□□□□□ -1.22
SOX1O00570 AL354702.2-202ENST00000641481 890 ntBASIC7.44□□□□□ -1.22
SOX1O00570 AC051619.3-201ENST00000560646 2426 ntBASIC7.44□□□□□ -1.22
SOX1O00570 NAV2-203ENST00000396085 11000 ntAPPRIS P4 TSL 5 BASIC7.44□□□□□ -1.22
SOX1O00570 LRBA-204ENST00000507224 8826 ntTSL 5 BASIC7.44□□□□□ -1.22
SOX1O00570 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC7.44□□□□□ -1.22
SOX1O00570 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC7.44□□□□□ -1.22
SOX1O00570 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
SOX1O00570 LDAH-209ENST00000440866 3728 ntTSL 2 BASIC7.44□□□□□ -1.22
SOX1O00570 ZNF845-202ENST00000595091 4413 ntAPPRIS P1 TSL 4 BASIC7.44□□□□□ -1.22
SOX1O00570 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
SOX1O00570 CFAP47-201ENST00000297866 3608 ntTSL 2 BASIC7.44□□□□□ -1.22
SOX1O00570 AL954650.1-201ENST00000430776 2051 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SOX1O00570 ZMYND8-212ENST00000458360 3729 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
SOX1O00570 MATR3-232ENST00000502929 4373 ntTSL 2 BASIC7.43□□□□□ -1.22
SOX1O00570 GABRB3-225ENST00000638099 2752 ntTSL 5 BASIC7.43□□□□□ -1.22
SOX1O00570 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SOX1O00570 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC7.43□□□□□ -1.22
SOX1O00570 SHQ1P1-201ENST00000437111 1544 ntBASIC7.43□□□□□ -1.22
SOX1O00570 EPHA4-201ENST00000281821 6346 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
SOX1O00570 AL355103.1-201ENST00000557246 2226 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SOX1O00570 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SOX1O00570 LOXHD1-201ENST00000300591 3970 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SOX1O00570 CD86-201ENST00000264468 2634 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
SOX1O00570 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SOX1O00570 NMD3-201ENST00000351193 3049 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
SOX1O00570 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC7.43□□□□□ -1.22
SOX1O00570 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
SOX1O00570 KCNA2-214ENST00000640774 6673 ntTSL 5 BASIC7.43□□□□□ -1.22
SOX1O00570 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
SOX1O00570 TDGF1P3-202ENST00000602699 2710 ntBASIC7.43□□□□□ -1.22
SOX1O00570 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
SOX1O00570 DEFA6-201ENST00000297436 469 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
SOX1O00570 RNA5SP514-201ENST00000363717 111 ntBASIC7.43□□□□□ -1.22
SOX1O00570 Y_RNA.560-201ENST00000384689 102 ntBASIC7.43□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms