Protein–RNA interactions for Protein: Q9HCJ6

VAT1L, Synaptic vesicle membrane protein VAT-1 homolog-like, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1LQ9HCJ6 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
VAT1LQ9HCJ6 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
VAT1LQ9HCJ6 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
VAT1LQ9HCJ6 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.75□□□□□ -1.33
VAT1LQ9HCJ6 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
VAT1LQ9HCJ6 OR52B5P-204ENST00000641744 3467 ntBASIC6.75□□□□□ -1.33
VAT1LQ9HCJ6 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
VAT1LQ9HCJ6 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
VAT1LQ9HCJ6 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
VAT1LQ9HCJ6 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
VAT1LQ9HCJ6 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
VAT1LQ9HCJ6 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
VAT1LQ9HCJ6 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
VAT1LQ9HCJ6 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
VAT1LQ9HCJ6 RNA5SP394-201ENST00000364216 119 ntBASIC6.74□□□□□ -1.33
VAT1LQ9HCJ6 RN7SKP69-201ENST00000365390 305 ntBASIC6.74□□□□□ -1.33
VAT1LQ9HCJ6 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
VAT1LQ9HCJ6 CDY17P-201ENST00000414121 1282 ntBASIC6.74□□□□□ -1.33
VAT1LQ9HCJ6 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC6.74□□□□□ -1.33
VAT1LQ9HCJ6 NAP1L4P2-201ENST00000425958 899 ntBASIC6.74□□□□□ -1.33
VAT1LQ9HCJ6 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
VAT1LQ9HCJ6 AL365220.1-201ENST00000432923 399 ntBASIC6.74□□□□□ -1.33
VAT1LQ9HCJ6 GAPDHP48-201ENST00000436626 961 ntBASIC6.74□□□□□ -1.33
VAT1LQ9HCJ6 AC064862.4-201ENST00000442180 334 ntBASIC6.74□□□□□ -1.33
VAT1LQ9HCJ6 HMGN1P36-201ENST00000446623 298 ntBASIC6.74□□□□□ -1.33
VAT1LQ9HCJ6 YWHAEP1-201ENST00000453697 763 ntBASIC6.74□□□□□ -1.33
VAT1LQ9HCJ6 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC6.74□□□□□ -1.33
VAT1LQ9HCJ6 RPL32P33-201ENST00000487023 394 ntBASIC6.74□□□□□ -1.33
VAT1LQ9HCJ6 AC139365.2-201ENST00000517972 253 ntBASIC6.74□□□□□ -1.33
VAT1LQ9HCJ6 AC007346.2-201ENST00000564816 892 ntBASIC6.74□□□□□ -1.33
VAT1LQ9HCJ6 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC6.74□□□□□ -1.33
VAT1LQ9HCJ6 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.74□□□□□ -1.33
VAT1LQ9HCJ6 OR7A8P-201ENST00000595427 913 ntBASIC6.74□□□□□ -1.33
VAT1LQ9HCJ6 AL034374.2-201ENST00000605281 548 ntBASIC6.74□□□□□ -1.33
VAT1LQ9HCJ6 REV3L-214ENST00000619481 969 ntTSL 5 BASIC6.74□□□□□ -1.33
VAT1LQ9HCJ6 AL357153.4-201ENST00000620487 1016 ntBASIC6.74□□□□□ -1.33
VAT1LQ9HCJ6 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.74□□□□□ -1.33
VAT1LQ9HCJ6 AL355480.1-201ENST00000629041 99 ntBASIC6.74□□□□□ -1.33
VAT1LQ9HCJ6 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC6.74□□□□□ -1.33
VAT1LQ9HCJ6 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.74□□□□□ -1.33
VAT1LQ9HCJ6 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
VAT1LQ9HCJ6 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC6.74□□□□□ -1.33
VAT1LQ9HCJ6 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC6.74□□□□□ -1.33
VAT1LQ9HCJ6 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
VAT1LQ9HCJ6 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.73□□□□□ -1.33
VAT1LQ9HCJ6 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
VAT1LQ9HCJ6 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
VAT1LQ9HCJ6 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
VAT1LQ9HCJ6 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
VAT1LQ9HCJ6 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
VAT1LQ9HCJ6 RNA5SP435-201ENST00000364044 108 ntBASIC6.73□□□□□ -1.33
VAT1LQ9HCJ6 RN7SKP81-201ENST00000365603 331 ntBASIC6.73□□□□□ -1.33
VAT1LQ9HCJ6 AL357752.1-201ENST00000412817 349 ntBASIC6.73□□□□□ -1.33
VAT1LQ9HCJ6 AC127526.2-201ENST00000426436 775 ntBASIC6.73□□□□□ -1.33
VAT1LQ9HCJ6 AK3P5-201ENST00000432033 519 ntBASIC6.73□□□□□ -1.33
VAT1LQ9HCJ6 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC6.73□□□□□ -1.33
VAT1LQ9HCJ6 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC6.73□□□□□ -1.33
VAT1LQ9HCJ6 RNU1-88P-201ENST00000459274 128 ntBASIC6.73□□□□□ -1.33
VAT1LQ9HCJ6 RPSAP37-201ENST00000470913 821 ntBASIC6.73□□□□□ -1.33
VAT1LQ9HCJ6 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.73□□□□□ -1.33
VAT1LQ9HCJ6 TOMM22P4-201ENST00000511318 336 ntBASIC6.73□□□□□ -1.33
VAT1LQ9HCJ6 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC6.73□□□□□ -1.33
VAT1LQ9HCJ6 CYCSP22-201ENST00000517555 339 ntBASIC6.73□□□□□ -1.33
VAT1LQ9HCJ6 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.73□□□□□ -1.33
VAT1LQ9HCJ6 AC244502.2-201ENST00000543361 851 ntBASIC6.73□□□□□ -1.33
VAT1LQ9HCJ6 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.73□□□□□ -1.33
VAT1LQ9HCJ6 MIR6862-1-201ENST00000613016 70 ntBASIC6.73□□□□□ -1.33
VAT1LQ9HCJ6 MIR6862-2-201ENST00000614755 70 ntBASIC6.73□□□□□ -1.33
VAT1LQ9HCJ6 AC126175.1-201ENST00000617041 758 ntBASIC6.73□□□□□ -1.33
VAT1LQ9HCJ6 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC6.73□□□□□ -1.33
VAT1LQ9HCJ6 AC069234.4-201ENST00000621276 412 ntBASIC6.73□□□□□ -1.33
VAT1LQ9HCJ6 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC6.73□□□□□ -1.33
VAT1LQ9HCJ6 AC022919.1-201ENST00000624979 626 ntBASIC6.73□□□□□ -1.33
VAT1LQ9HCJ6 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC6.73□□□□□ -1.33
VAT1LQ9HCJ6 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC6.73□□□□□ -1.33
VAT1LQ9HCJ6 AL596275.2-208ENST00000641192 594 ntBASIC6.73□□□□□ -1.33
VAT1LQ9HCJ6 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
VAT1LQ9HCJ6 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC6.73□□□□□ -1.33
VAT1LQ9HCJ6 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC6.73□□□□□ -1.33
VAT1LQ9HCJ6 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.73□□□□□ -1.33
VAT1LQ9HCJ6 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.73□□□□□ -1.33
VAT1LQ9HCJ6 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
VAT1LQ9HCJ6 AC007842.1-201ENST00000597336 2039 ntBASIC6.72□□□□□ -1.33
VAT1LQ9HCJ6 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.72□□□□□ -1.33
VAT1LQ9HCJ6 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.72□□□□□ -1.33
VAT1LQ9HCJ6 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
VAT1LQ9HCJ6 AC114876.1-201ENST00000490962 1366 ntBASIC6.72□□□□□ -1.33
VAT1LQ9HCJ6 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
VAT1LQ9HCJ6 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.72□□□□□ -1.33
VAT1LQ9HCJ6 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC6.72□□□□□ -1.33
VAT1LQ9HCJ6 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
VAT1LQ9HCJ6 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC6.72□□□□□ -1.33
VAT1LQ9HCJ6 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.72□□□□□ -1.33
VAT1LQ9HCJ6 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.72□□□□□ -1.33
VAT1LQ9HCJ6 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.72□□□□□ -1.33
VAT1LQ9HCJ6 AC087752.1-201ENST00000391360 558 ntBASIC6.72□□□□□ -1.33
VAT1LQ9HCJ6 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.72□□□□□ -1.33
VAT1LQ9HCJ6 AK4P4-201ENST00000419465 646 ntBASIC6.72□□□□□ -1.33
VAT1LQ9HCJ6 AL662874.1-201ENST00000426065 230 ntBASIC6.72□□□□□ -1.33
VAT1LQ9HCJ6 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms