Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.99□□□□□ -1.45
VMP1Q96GC9 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
VMP1Q96GC9 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC5.99□□□□□ -1.45
VMP1Q96GC9 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.99□□□□□ -1.45
VMP1Q96GC9 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC5.99□□□□□ -1.45
VMP1Q96GC9 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC5.99□□□□□ -1.45
VMP1Q96GC9 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC5.99□□□□□ -1.45
VMP1Q96GC9 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC5.99□□□□□ -1.45
VMP1Q96GC9 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.99□□□□□ -1.45
VMP1Q96GC9 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.99□□□□□ -1.45
VMP1Q96GC9 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC5.99□□□□□ -1.45
VMP1Q96GC9 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.99□□□□□ -1.45
VMP1Q96GC9 AC006272.2-201ENST00000594725 163 ntBASIC5.99□□□□□ -1.45
VMP1Q96GC9 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.99□□□□□ -1.45
VMP1Q96GC9 AP001267.4-201ENST00000602598 545 ntBASIC5.99□□□□□ -1.45
VMP1Q96GC9 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.99□□□□□ -1.45
VMP1Q96GC9 IGKV2OR2-1-201ENST00000605129 304 ntBASIC5.99□□□□□ -1.45
VMP1Q96GC9 AC005828.7-201ENST00000607331 556 ntBASIC5.99□□□□□ -1.45
VMP1Q96GC9 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC5.99□□□□□ -1.45
VMP1Q96GC9 MIR6811-201ENST00000620409 58 ntBASIC5.99□□□□□ -1.45
VMP1Q96GC9 AL132640.3-201ENST00000630473 177 ntBASIC5.99□□□□□ -1.45
VMP1Q96GC9 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.99□□□□□ -1.45
VMP1Q96GC9 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
VMP1Q96GC9 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
VMP1Q96GC9 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.99□□□□□ -1.45
VMP1Q96GC9 AC087516.1-201ENST00000561236 2428 ntBASIC5.99□□□□□ -1.45
VMP1Q96GC9 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.99□□□□□ -1.45
VMP1Q96GC9 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.99□□□□□ -1.45
VMP1Q96GC9 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.99□□□□□ -1.45
VMP1Q96GC9 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.99□□□□□ -1.45
VMP1Q96GC9 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.99□□□□□ -1.45
VMP1Q96GC9 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
VMP1Q96GC9 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
VMP1Q96GC9 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.98□□□□□ -1.45
VMP1Q96GC9 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.98□□□□□ -1.45
VMP1Q96GC9 SOCS5P3-201ENST00000425115 1576 ntBASIC5.98□□□□□ -1.45
VMP1Q96GC9 CNOT6LP1-201ENST00000559681 1462 ntBASIC5.98□□□□□ -1.45
VMP1Q96GC9 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
VMP1Q96GC9 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC5.98□□□□□ -1.45
VMP1Q96GC9 CASC19-248ENST00000641674 1356 ntBASIC5.98□□□□□ -1.45
VMP1Q96GC9 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
VMP1Q96GC9 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.98□□□□□ -1.45
VMP1Q96GC9 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.98□□□□□ -1.45
VMP1Q96GC9 SNORD35A-201ENST00000363389 86 ntBASIC5.98□□□□□ -1.45
VMP1Q96GC9 RNA5SP77-201ENST00000365394 120 ntBASIC5.98□□□□□ -1.45
VMP1Q96GC9 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
VMP1Q96GC9 AC003045.1-201ENST00000398779 713 ntBASIC5.98□□□□□ -1.45
VMP1Q96GC9 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC5.98□□□□□ -1.45
VMP1Q96GC9 OR51A6P-201ENST00000418680 1004 ntBASIC5.98□□□□□ -1.45
VMP1Q96GC9 AL157884.1-201ENST00000424561 454 ntBASIC5.98□□□□□ -1.45
VMP1Q96GC9 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.98□□□□□ -1.45
VMP1Q96GC9 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.98□□□□□ -1.45
VMP1Q96GC9 AL392003.1-201ENST00000434394 243 ntBASIC5.98□□□□□ -1.45
VMP1Q96GC9 AC010086.1-201ENST00000437359 1052 ntBASIC5.98□□□□□ -1.45
VMP1Q96GC9 AL390879.1-201ENST00000439143 386 ntBASIC5.98□□□□□ -1.45
VMP1Q96GC9 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC5.98□□□□□ -1.45
VMP1Q96GC9 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC5.98□□□□□ -1.45
VMP1Q96GC9 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.98□□□□□ -1.45
VMP1Q96GC9 OR2L9P-201ENST00000444456 913 ntBASIC5.98□□□□□ -1.45
VMP1Q96GC9 H3F3AP5-201ENST00000475267 429 ntBASIC5.98□□□□□ -1.45
VMP1Q96GC9 GM2AP2-201ENST00000491764 562 ntBASIC5.98□□□□□ -1.45
VMP1Q96GC9 RN7SL649P-201ENST00000496974 275 ntBASIC5.98□□□□□ -1.45
VMP1Q96GC9 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
VMP1Q96GC9 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
VMP1Q96GC9 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
VMP1Q96GC9 RN7SKP183-201ENST00000517169 324 ntBASIC5.98□□□□□ -1.45
VMP1Q96GC9 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.98□□□□□ -1.45
VMP1Q96GC9 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC5.98□□□□□ -1.45
VMP1Q96GC9 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC5.98□□□□□ -1.45
VMP1Q96GC9 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.98□□□□□ -1.45
VMP1Q96GC9 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.98□□□□□ -1.45
VMP1Q96GC9 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC5.98□□□□□ -1.45
VMP1Q96GC9 AC012213.4-201ENST00000606457 354 ntBASIC5.98□□□□□ -1.45
VMP1Q96GC9 AC009779.8-202ENST00000607990 932 ntBASIC5.98□□□□□ -1.45
VMP1Q96GC9 uc_338.29-201ENST00000615099 168 ntBASIC5.98□□□□□ -1.45
VMP1Q96GC9 AP001005.3-201ENST00000622049 129 ntBASIC5.98□□□□□ -1.45
VMP1Q96GC9 AC105105.5-201ENST00000622635 1294 ntBASIC5.98□□□□□ -1.45
VMP1Q96GC9 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.98□□□□□ -1.45
VMP1Q96GC9 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.98□□□□□ -1.45
VMP1Q96GC9 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.98□□□□□ -1.45
VMP1Q96GC9 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.98□□□□□ -1.45
VMP1Q96GC9 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
VMP1Q96GC9 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
VMP1Q96GC9 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.98□□□□□ -1.45
VMP1Q96GC9 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
VMP1Q96GC9 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC5.98□□□□□ -1.45
VMP1Q96GC9 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
VMP1Q96GC9 AC090181.3-201ENST00000624777 1514 ntBASIC5.98□□□□□ -1.45
VMP1Q96GC9 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
VMP1Q96GC9 MAPK10-338ENST00000641647 3362 ntBASIC5.98□□□□□ -1.45
VMP1Q96GC9 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
VMP1Q96GC9 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC5.98□□□□□ -1.45
VMP1Q96GC9 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
VMP1Q96GC9 PARP4P2-201ENST00000446672 3326 ntBASIC5.97□□□□□ -1.45
VMP1Q96GC9 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.97□□□□□ -1.45
VMP1Q96GC9 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
VMP1Q96GC9 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
VMP1Q96GC9 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC5.97□□□□□ -1.45
VMP1Q96GC9 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
VMP1Q96GC9 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms