Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 NPM1P40-201ENST00000412758 733 ntBASIC7.63□□□□□ -1.19
COL16A1Q07092 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC7.63□□□□□ -1.19
COL16A1Q07092 AL022237.1-201ENST00000446663 358 ntBASIC7.63□□□□□ -1.19
COL16A1Q07092 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC7.63□□□□□ -1.19
COL16A1Q07092 RPL23AP40-201ENST00000487630 390 ntBASIC7.63□□□□□ -1.19
COL16A1Q07092 CCDC11P1-201ENST00000503137 1162 ntBASIC7.63□□□□□ -1.19
COL16A1Q07092 AC004980.4-201ENST00000513375 203 ntBASIC7.63□□□□□ -1.19
COL16A1Q07092 RN7SKP99-201ENST00000517028 307 ntBASIC7.63□□□□□ -1.19
COL16A1Q07092 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC7.63□□□□□ -1.19
COL16A1Q07092 AP000919.1-201ENST00000582850 985 ntBASIC7.63□□□□□ -1.19
COL16A1Q07092 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC7.63□□□□□ -1.19
COL16A1Q07092 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
COL16A1Q07092 FREM1-204ENST00000422223 10086 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
COL16A1Q07092 CHD2-201ENST00000394196 9363 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
COL16A1Q07092 AL590004.4-201ENST00000566733 7060 ntBASIC7.62□□□□□ -1.19
COL16A1Q07092 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC7.62□□□□□ -1.19
COL16A1Q07092 ZNFX1-204ENST00000396105 7371 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
COL16A1Q07092 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
COL16A1Q07092 TTC28-208ENST00000612946 11274 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
COL16A1Q07092 RC3H1-203ENST00000367696 11261 ntAPPRIS P3 TSL 5 BASIC7.62□□□□□ -1.19
COL16A1Q07092 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
COL16A1Q07092 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
COL16A1Q07092 SNORA16A-201ENST00000384342 137 ntBASIC7.62□□□□□ -1.19
COL16A1Q07092 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC7.62□□□□□ -1.19
COL16A1Q07092 AC008072.1-201ENST00000434254 824 ntBASIC7.62□□□□□ -1.19
COL16A1Q07092 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC7.62□□□□□ -1.19
COL16A1Q07092 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC7.62□□□□□ -1.19
COL16A1Q07092 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC7.62□□□□□ -1.19
COL16A1Q07092 AL513533.1-201ENST00000453728 415 ntBASIC7.62□□□□□ -1.19
COL16A1Q07092 OR13C1P-201ENST00000457612 963 ntBASIC7.62□□□□□ -1.19
COL16A1Q07092 AL035690.1-201ENST00000490892 383 ntBASIC7.62□□□□□ -1.19
COL16A1Q07092 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC7.62□□□□□ -1.19
COL16A1Q07092 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC7.62□□□□□ -1.19
COL16A1Q07092 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC7.62□□□□□ -1.19
COL16A1Q07092 AC136624.4-201ENST00000573044 370 ntBASIC7.62□□□□□ -1.19
COL16A1Q07092 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC7.62□□□□□ -1.19
COL16A1Q07092 AC095055.1-201ENST00000603472 1113 ntBASIC7.62□□□□□ -1.19
COL16A1Q07092 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
COL16A1Q07092 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC7.62□□□□□ -1.19
COL16A1Q07092 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
COL16A1Q07092 RMST-210ENST00000640149 2844 ntTSL 5 BASIC7.62□□□□□ -1.19
COL16A1Q07092 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
COL16A1Q07092 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC7.62□□□□□ -1.19
COL16A1Q07092 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
COL16A1Q07092 CRB1-202ENST00000367399 3885 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
COL16A1Q07092 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
COL16A1Q07092 SPEF2-211ENST00000509059 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
COL16A1Q07092 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
COL16A1Q07092 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC7.61□□□□□ -1.19
COL16A1Q07092 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
COL16A1Q07092 KIF1B-211ENST00000620295 8624 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
COL16A1Q07092 HOOK3-201ENST00000307602 14398 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
COL16A1Q07092 ARMC8-210ENST00000469044 4790 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
COL16A1Q07092 SNURFL-201ENST00000309296 343 ntBASIC7.61□□□□□ -1.19
COL16A1Q07092 RNA5SP479-201ENST00000364858 117 ntBASIC7.61□□□□□ -1.19
COL16A1Q07092 RNU4-2-201ENST00000365668 141 ntBASIC7.61□□□□□ -1.19
COL16A1Q07092 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC7.61□□□□□ -1.19
COL16A1Q07092 AC007064.3-201ENST00000422608 359 ntBASIC7.61□□□□□ -1.19
COL16A1Q07092 DUBR-205ENST00000495228 411 ntTSL 2 BASIC7.61□□□□□ -1.19
COL16A1Q07092 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
COL16A1Q07092 HMGB1P40-201ENST00000525121 540 ntBASIC7.61□□□□□ -1.19
COL16A1Q07092 AC009117.1-201ENST00000563948 554 ntBASIC7.61□□□□□ -1.19
COL16A1Q07092 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC7.61□□□□□ -1.19
COL16A1Q07092 AC091193.1-201ENST00000604640 448 ntBASIC7.61□□□□□ -1.19
COL16A1Q07092 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
COL16A1Q07092 AC112694.2-201ENST00000623697 768 ntBASIC7.61□□□□□ -1.19
COL16A1Q07092 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC7.61□□□□□ -1.19
COL16A1Q07092 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC7.61□□□□□ -1.19
COL16A1Q07092 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
COL16A1Q07092 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
COL16A1Q07092 MTF1-201ENST00000373036 7972 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
COL16A1Q07092 GON4L-203ENST00000368331 7823 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
COL16A1Q07092 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
COL16A1Q07092 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC7.61□□□□□ -1.19
COL16A1Q07092 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC7.61□□□□□ -1.19
COL16A1Q07092 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
COL16A1Q07092 THAP12P9-201ENST00000503971 2360 ntBASIC7.61□□□□□ -1.19
COL16A1Q07092 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC7.61□□□□□ -1.19
COL16A1Q07092 FAM135B-204ENST00000395297 6962 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
COL16A1Q07092 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC7.61□□□□□ -1.19
COL16A1Q07092 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC7.6□□□□□ -1.19
COL16A1Q07092 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC7.6□□□□□ -1.19
COL16A1Q07092 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
COL16A1Q07092 RN7SKP149-201ENST00000363008 344 ntBASIC7.6□□□□□ -1.19
COL16A1Q07092 SNORA70.2-201ENST00000364506 135 ntBASIC7.6□□□□□ -1.19
COL16A1Q07092 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
COL16A1Q07092 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
COL16A1Q07092 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC7.6□□□□□ -1.19
COL16A1Q07092 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC7.6□□□□□ -1.19
COL16A1Q07092 CYP4F29P-201ENST00000420685 446 ntBASIC7.6□□□□□ -1.19
COL16A1Q07092 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC7.6□□□□□ -1.19
COL16A1Q07092 KRTAP5-14P-201ENST00000502328 121 ntBASIC7.6□□□□□ -1.19
COL16A1Q07092 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC7.6□□□□□ -1.19
COL16A1Q07092 AC105384.2-201ENST00000508433 640 ntBASIC7.6□□□□□ -1.19
COL16A1Q07092 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC7.6□□□□□ -1.19
COL16A1Q07092 RN7SKP288-201ENST00000516227 268 ntBASIC7.6□□□□□ -1.19
COL16A1Q07092 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
COL16A1Q07092 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC7.6□□□□□ -1.19
COL16A1Q07092 AC018558.5-201ENST00000565840 952 ntBASIC7.6□□□□□ -1.19
COL16A1Q07092 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms