Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
SMARCA4P51532 PPP1R12B-204ENST00000391959 15431 ntTSL 5 BASIC10.05□□□□□ -0.8
SMARCA4P51532 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC10.05□□□□□ -0.8
SMARCA4P51532 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
SMARCA4P51532 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
SMARCA4P51532 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
SMARCA4P51532 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC10.05□□□□□ -0.8
SMARCA4P51532 MGST2-204ENST00000506797 634 ntTSL 2 BASIC10.05□□□□□ -0.8
SMARCA4P51532 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC10.05□□□□□ -0.8
SMARCA4P51532 OR51A1P-201ENST00000511110 946 ntBASIC10.05□□□□□ -0.8
SMARCA4P51532 AC024940.3-201ENST00000538551 316 ntBASIC10.05□□□□□ -0.8
SMARCA4P51532 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC10.05□□□□□ -0.8
SMARCA4P51532 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
SMARCA4P51532 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SMARCA4P51532 HLTF-201ENST00000310053 5317 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
SMARCA4P51532 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
SMARCA4P51532 COL24A1-201ENST00000370571 6825 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SMARCA4P51532 MAPK10-365ENST00000641902 3825 ntBASIC10.05□□□□□ -0.8
SMARCA4P51532 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC10.05□□□□□ -0.8
SMARCA4P51532 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SMARCA4P51532 SRSF1P1-201ENST00000424058 520 ntBASIC10.04□□□□□ -0.8
SMARCA4P51532 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
SMARCA4P51532 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC10.04□□□□□ -0.8
SMARCA4P51532 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SMARCA4P51532 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC10.04□□□□□ -0.8
SMARCA4P51532 ZNF793-201ENST00000445217 6712 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
SMARCA4P51532 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC10.04□□□□□ -0.8
SMARCA4P51532 AP000866.6-201ENST00000638898 3579 ntBASIC10.04□□□□□ -0.8
SMARCA4P51532 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC10.04□□□□□ -0.8
SMARCA4P51532 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
SMARCA4P51532 SNORA17.1-201ENST00000362945 126 ntBASIC10.04□□□□□ -0.8
SMARCA4P51532 RNU1-43P-201ENST00000365052 165 ntBASIC10.04□□□□□ -0.8
SMARCA4P51532 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC10.04□□□□□ -0.8
SMARCA4P51532 FAM96AP1-201ENST00000430879 482 ntBASIC10.04□□□□□ -0.8
SMARCA4P51532 AL772161.1-201ENST00000439130 476 ntBASIC10.04□□□□□ -0.8
SMARCA4P51532 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC10.04□□□□□ -0.8
SMARCA4P51532 RPS23P2-201ENST00000463671 415 ntBASIC10.04□□□□□ -0.8
SMARCA4P51532 AC092324.1-201ENST00000468671 324 ntBASIC10.04□□□□□ -0.8
SMARCA4P51532 CSNK1A1P3-201ENST00000504105 330 ntBASIC10.04□□□□□ -0.8
SMARCA4P51532 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC10.04□□□□□ -0.8
SMARCA4P51532 AL121594.2-201ENST00000541658 472 ntBASIC10.04□□□□□ -0.8
SMARCA4P51532 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC10.04□□□□□ -0.8
SMARCA4P51532 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC10.04□□□□□ -0.8
SMARCA4P51532 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC10.04□□□□□ -0.8
SMARCA4P51532 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC10.04□□□□□ -0.8
SMARCA4P51532 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
SMARCA4P51532 EIF3F-208ENST00000533626 7540 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
SMARCA4P51532 OR55B1P-203ENST00000641518 2602 ntBASIC10.03□□□□□ -0.8
SMARCA4P51532 AC092724.1-201ENST00000624623 3397 ntBASIC10.03□□□□□ -0.8
SMARCA4P51532 PPFIA2-220ENST00000550584 5405 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SMARCA4P51532 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SMARCA4P51532 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC10.03□□□□□ -0.8
SMARCA4P51532 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC10.03□□□□□ -0.8
SMARCA4P51532 AC026951.1-201ENST00000559530 2459 ntBASIC10.03□□□□□ -0.8
SMARCA4P51532 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SMARCA4P51532 DNAH9-201ENST00000262442 13750 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SMARCA4P51532 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC10.03□□□□□ -0.8
SMARCA4P51532 OR4K12P-201ENST00000406538 961 ntBASIC10.03□□□□□ -0.8
SMARCA4P51532 AC007161.1-204ENST00000423039 460 ntBASIC10.03□□□□□ -0.8
SMARCA4P51532 AL606490.8-201ENST00000441624 319 ntBASIC10.03□□□□□ -0.8
SMARCA4P51532 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC10.03□□□□□ -0.8
SMARCA4P51532 AL671862.1-201ENST00000515851 349 ntBASIC10.03□□□□□ -0.8
SMARCA4P51532 HMGB1P40-201ENST00000525121 540 ntBASIC10.03□□□□□ -0.8
SMARCA4P51532 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC10.03□□□□□ -0.8
SMARCA4P51532 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC10.03□□□□□ -0.8
SMARCA4P51532 CASC22-202ENST00000628396 802 ntTSL 5 BASIC10.03□□□□□ -0.8
SMARCA4P51532 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC10.03□□□□□ -0.8
SMARCA4P51532 AC114876.1-201ENST00000490962 1366 ntBASIC10.03□□□□□ -0.8
SMARCA4P51532 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC10.02□□□□□ -0.8
SMARCA4P51532 ZNF24-204ENST00000589881 7419 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
SMARCA4P51532 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
SMARCA4P51532 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC10.02□□□□□ -0.8
SMARCA4P51532 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC10.02□□□□□ -0.8
SMARCA4P51532 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
SMARCA4P51532 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
SMARCA4P51532 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
SMARCA4P51532 DSG3-201ENST00000257189 5525 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
SMARCA4P51532 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC10.02□□□□□ -0.81
SMARCA4P51532 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
SMARCA4P51532 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC10.02□□□□□ -0.81
SMARCA4P51532 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
SMARCA4P51532 PPP2R2DP1-201ENST00000420526 637 ntBASIC10.02□□□□□ -0.81
SMARCA4P51532 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC10.02□□□□□ -0.81
SMARCA4P51532 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC10.02□□□□□ -0.81
SMARCA4P51532 RN7SL346P-201ENST00000491561 294 ntBASIC10.02□□□□□ -0.81
SMARCA4P51532 RPL37AP8-201ENST00000494116 276 ntBASIC10.02□□□□□ -0.81
SMARCA4P51532 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC10.02□□□□□ -0.81
SMARCA4P51532 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC10.02□□□□□ -0.81
SMARCA4P51532 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC10.02□□□□□ -0.81
SMARCA4P51532 ZNF462-204ENST00000441147 4691 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
SMARCA4P51532 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
SMARCA4P51532 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC10.02□□□□□ -0.81
SMARCA4P51532 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
SMARCA4P51532 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
SMARCA4P51532 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
SMARCA4P51532 PTPRT-205ENST00000373193 12681 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
SMARCA4P51532 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
SMARCA4P51532 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
SMARCA4P51532 CAPRIN1-209ENST00000530820 3454 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
SMARCA4P51532 CTNND1-220ENST00000529526 6099 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 160.3 ms