Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC3.45□□□□□ -1.86
APOBP04114 AL359265.2-201ENST00000434367 631 ntBASIC3.45□□□□□ -1.86
APOBP04114 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC3.45□□□□□ -1.86
APOBP04114 snoU13.20-201ENST00000459180 104 ntBASIC3.45□□□□□ -1.86
APOBP04114 IGBP1P5-201ENST00000507524 1000 ntBASIC3.45□□□□□ -1.86
APOBP04114 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC3.45□□□□□ -1.86
APOBP04114 RN7SKP122-201ENST00000515923 296 ntBASIC3.45□□□□□ -1.86
APOBP04114 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
APOBP04114 AC009117.1-201ENST00000563948 554 ntBASIC3.45□□□□□ -1.86
APOBP04114 AC007346.2-201ENST00000564816 892 ntBASIC3.45□□□□□ -1.86
APOBP04114 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC3.45□□□□□ -1.86
APOBP04114 MTCO1P1-201ENST00000624263 1081 ntBASIC3.45□□□□□ -1.86
APOBP04114 CPEB3-202ENST00000412050 7664 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
APOBP04114 PARP4P1-201ENST00000435945 2337 ntBASIC3.45□□□□□ -1.86
APOBP04114 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
APOBP04114 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
APOBP04114 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
APOBP04114 AC005618.1-201ENST00000606901 3148 ntBASIC3.45□□□□□ -1.86
APOBP04114 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC3.45□□□□□ -1.86
APOBP04114 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC3.45□□□□□ -1.86
APOBP04114 MIR4260-201ENST00000583107 67 ntBASIC3.45□□□□□ -1.86
APOBP04114 AC135068.12-201ENST00000637370 931 ntBASIC3.45□□□□□ -1.86
APOBP04114 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC3.45□□□□□ -1.86
APOBP04114 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
APOBP04114 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
APOBP04114 FRMPD2-201ENST00000305531 4665 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
APOBP04114 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
APOBP04114 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
APOBP04114 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
APOBP04114 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC3.45□□□□□ -1.86
APOBP04114 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
APOBP04114 WDCP-202ENST00000406895 3700 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
APOBP04114 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC3.44□□□□□ -1.86
APOBP04114 CPM-211ENST00000551568 6655 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
APOBP04114 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC3.44□□□□□ -1.86
APOBP04114 AL138878.2-201ENST00000440581 1241 ntBASIC3.44□□□□□ -1.86
APOBP04114 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC3.44□□□□□ -1.86
APOBP04114 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC3.44□□□□□ -1.86
APOBP04114 OR5AN2P-201ENST00000534535 896 ntBASIC3.44□□□□□ -1.86
APOBP04114 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
APOBP04114 OR4H6P-201ENST00000563771 921 ntBASIC3.44□□□□□ -1.86
APOBP04114 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
APOBP04114 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC3.44□□□□□ -1.86
APOBP04114 MTF1-201ENST00000373036 7972 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
APOBP04114 AC022034.1-201ENST00000512867 2156 ntBASIC3.44□□□□□ -1.86
APOBP04114 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
APOBP04114 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
APOBP04114 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
APOBP04114 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC3.44□□□□□ -1.86
APOBP04114 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
APOBP04114 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC3.44□□□□□ -1.86
APOBP04114 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
APOBP04114 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
APOBP04114 CNTNAP2-201ENST00000361727 9896 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
APOBP04114 ARPP21-203ENST00000396482 2416 ntTSL 2 BASIC3.44□□□□□ -1.86
APOBP04114 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC3.44□□□□□ -1.86
APOBP04114 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC3.44□□□□□ -1.86
APOBP04114 AC234781.3-201ENST00000452540 973 ntBASIC3.44□□□□□ -1.86
APOBP04114 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC3.44□□□□□ -1.86
APOBP04114 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC3.44□□□□□ -1.86
APOBP04114 ZBTB44-205ENST00000525842 9315 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
APOBP04114 HLTF-203ENST00000465259 5306 ntAPPRIS ALT1 TSL 1 (best) BASIC3.44□□□□□ -1.86
APOBP04114 FNDC3A-206ENST00000541916 6328 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
APOBP04114 DIDO1-206ENST00000395340 7551 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
APOBP04114 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC3.44□□□□□ -1.86
APOBP04114 MYO5A-213ENST00000613858 12139 ntAPPRIS ALT1 TSL 5 BASIC3.44□□□□□ -1.86
APOBP04114 RBM12B-202ENST00000517700 6001 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
APOBP04114 DICER1-204ENST00000527414 6179 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
APOBP04114 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC3.44□□□□□ -1.86
APOBP04114 AC114947.2-201ENST00000565748 2125 ntBASIC3.44□□□□□ -1.86
APOBP04114 GOLGA3-201ENST00000204726 9252 ntAPPRIS P3 TSL 5 BASIC3.44□□□□□ -1.86
APOBP04114 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
APOBP04114 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC3.44□□□□□ -1.86
APOBP04114 RNU1-149P-201ENST00000390870 161 ntBASIC3.44□□□□□ -1.86
APOBP04114 DUBR-205ENST00000495228 411 ntTSL 2 BASIC3.44□□□□□ -1.86
APOBP04114 AC091042.1-201ENST00000579213 173 ntBASIC3.44□□□□□ -1.86
APOBP04114 IPO5-229ENST00000631030 192 ntTSL 5 BASIC3.44□□□□□ -1.86
APOBP04114 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
APOBP04114 CTNND1-230ENST00000532245 5655 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
APOBP04114 TBC1D16-201ENST00000310924 10936 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
APOBP04114 ENAH-204ENST00000366844 13168 ntAPPRIS P4 TSL 1 (best) BASIC3.44□□□□□ -1.86
APOBP04114 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
APOBP04114 SESTD1-203ENST00000428443 10615 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
APOBP04114 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
APOBP04114 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
APOBP04114 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC3.44□□□□□ -1.86
APOBP04114 ADAMTS3-201ENST00000286657 6409 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
APOBP04114 SPATA13-201ENST00000343003 6405 ntAPPRIS ALT2 TSL 2 BASIC3.44□□□□□ -1.86
APOBP04114 COL6A4P1-202ENST00000487147 4317 ntBASIC3.44□□□□□ -1.86
APOBP04114 ZNF225-201ENST00000262894 4482 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
APOBP04114 FAM129A-201ENST00000367511 6928 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
APOBP04114 MCPH1-201ENST00000344683 8039 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
APOBP04114 ZEB2-232ENST00000636026 5172 ntTSL 5 BASIC3.44□□□□□ -1.86
APOBP04114 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
APOBP04114 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
APOBP04114 HIPK1-201ENST00000340480 6997 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
APOBP04114 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
APOBP04114 AC034236.1-201ENST00000469891 373 ntBASIC3.44□□□□□ -1.86
APOBP04114 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC3.44□□□□□ -1.86
APOBP04114 HMGB1P44-201ENST00000508597 572 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms