Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.01
USH2AO75445 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC2.46□□□□□ -2.01
USH2AO75445 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC2.46□□□□□ -2.01
USH2AO75445 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
USH2AO75445 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
USH2AO75445 MAN1A2-201ENST00000356554 8576 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
USH2AO75445 AL353763.2-201ENST00000623489 1903 ntBASIC2.46□□□□□ -2.02
USH2AO75445 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC2.46□□□□□ -2.02
USH2AO75445 EDA-213ENST00000616899 4643 ntTSL 5 BASIC2.46□□□□□ -2.02
USH2AO75445 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
USH2AO75445 SON-201ENST00000300278 7477 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
USH2AO75445 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
USH2AO75445 RNU4-2-201ENST00000365668 141 ntBASIC2.46□□□□□ -2.02
USH2AO75445 HSPA8P15-201ENST00000401676 786 ntBASIC2.46□□□□□ -2.02
USH2AO75445 RPL12P28-201ENST00000430852 489 ntBASIC2.46□□□□□ -2.02
USH2AO75445 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC2.46□□□□□ -2.02
USH2AO75445 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC2.46□□□□□ -2.02
USH2AO75445 AC011005.3-201ENST00000491624 395 ntBASIC2.46□□□□□ -2.02
USH2AO75445 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC2.46□□□□□ -2.02
USH2AO75445 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC2.46□□□□□ -2.02
USH2AO75445 OR2BH1P-201ENST00000608850 864 ntBASIC2.46□□□□□ -2.02
USH2AO75445 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
USH2AO75445 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC2.46□□□□□ -2.02
USH2AO75445 CASC19-255ENST00000641733 1385 ntBASIC2.46□□□□□ -2.02
USH2AO75445 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC2.46□□□□□ -2.02
USH2AO75445 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
USH2AO75445 AC023283.1-201ENST00000453491 4897 ntTSL 3 BASIC2.46□□□□□ -2.02
USH2AO75445 AC096921.2-201ENST00000561507 1916 ntBASIC2.46□□□□□ -2.02
USH2AO75445 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC2.46□□□□□ -2.02
USH2AO75445 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
USH2AO75445 AC112719.2-201ENST00000501239 1685 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
USH2AO75445 OR1D2-202ENST00000641064 4882 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
USH2AO75445 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC2.46□□□□□ -2.02
USH2AO75445 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC2.46□□□□□ -2.02
USH2AO75445 DOCK4-204ENST00000428084 7997 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
USH2AO75445 AC032011.1-201ENST00000611703 1549 ntBASIC2.46□□□□□ -2.02
USH2AO75445 PRDM15-203ENST00000422911 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
USH2AO75445 ADAMTSL1-205ENST00000380548 8030 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
USH2AO75445 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
USH2AO75445 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC2.46□□□□□ -2.02
USH2AO75445 MIR199B-201ENST00000384849 110 ntBASIC2.46□□□□□ -2.02
USH2AO75445 RPS6P23-201ENST00000413224 722 ntBASIC2.46□□□□□ -2.02
USH2AO75445 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC2.46□□□□□ -2.02
USH2AO75445 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC2.46□□□□□ -2.02
USH2AO75445 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC2.46□□□□□ -2.02
USH2AO75445 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC2.46□□□□□ -2.02
USH2AO75445 PPIAP21-201ENST00000464473 501 ntBASIC2.46□□□□□ -2.02
USH2AO75445 RPL7P19-201ENST00000469948 618 ntBASIC2.46□□□□□ -2.02
USH2AO75445 NDUFB4P12-201ENST00000513465 390 ntBASIC2.46□□□□□ -2.02
USH2AO75445 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC2.46□□□□□ -2.02
USH2AO75445 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC2.46□□□□□ -2.02
USH2AO75445 AC133555.2-201ENST00000550213 292 ntBASIC2.46□□□□□ -2.02
USH2AO75445 VN1R92P-201ENST00000598511 928 ntBASIC2.46□□□□□ -2.02
USH2AO75445 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC2.46□□□□□ -2.02
USH2AO75445 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
USH2AO75445 XIAP-202ENST00000371199 8591 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
USH2AO75445 TFCP2L1-201ENST00000263707 9292 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
USH2AO75445 RALGAPB-201ENST00000262879 8663 ntAPPRIS P3 TSL 1 (best) BASIC2.46□□□□□ -2.02
USH2AO75445 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC2.46□□□□□ -2.02
USH2AO75445 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC2.46□□□□□ -2.02
USH2AO75445 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
USH2AO75445 BRWD1-204ENST00000380800 7605 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
USH2AO75445 SP1-202ENST00000426431 7603 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
USH2AO75445 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
USH2AO75445 RNA5SP191-201ENST00000362585 102 ntBASIC2.46□□□□□ -2.02
USH2AO75445 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC2.46□□□□□ -2.02
USH2AO75445 AC097721.1-201ENST00000427150 1253 ntBASIC2.46□□□□□ -2.02
USH2AO75445 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC2.46□□□□□ -2.02
USH2AO75445 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC2.46□□□□□ -2.02
USH2AO75445 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC2.46□□□□□ -2.02
USH2AO75445 OR8G5-201ENST00000524943 1041 ntBASIC2.46□□□□□ -2.02
USH2AO75445 GCSHP4-201ENST00000538792 439 ntBASIC2.46□□□□□ -2.02
USH2AO75445 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC2.46□□□□□ -2.02
USH2AO75445 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
USH2AO75445 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC2.46□□□□□ -2.02
USH2AO75445 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC2.46□□□□□ -2.02
USH2AO75445 AC060766.1-201ENST00000590824 627 ntBASIC2.46□□□□□ -2.02
USH2AO75445 AC025574.2-201ENST00000615621 514 ntBASIC2.46□□□□□ -2.02
USH2AO75445 AC090607.5-201ENST00000615692 224 ntBASIC2.46□□□□□ -2.02
USH2AO75445 MYPN-201ENST00000354393 4596 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
USH2AO75445 ACAN-208ENST00000561243 7593 ntAPPRIS P2 TSL 5 BASIC2.46□□□□□ -2.02
USH2AO75445 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
USH2AO75445 GCC2-201ENST00000309863 7537 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
USH2AO75445 ZNF776-201ENST00000317178 5292 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
USH2AO75445 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC2.46□□□□□ -2.02
USH2AO75445 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
USH2AO75445 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
USH2AO75445 EPHA5-205ENST00000613740 8355 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
USH2AO75445 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
USH2AO75445 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
USH2AO75445 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
USH2AO75445 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC2.46□□□□□ -2.02
USH2AO75445 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
USH2AO75445 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
USH2AO75445 AL023284.3-201ENST00000407767 334 ntBASIC2.45□□□□□ -2.02
USH2AO75445 ELOCP19-201ENST00000411919 318 ntBASIC2.45□□□□□ -2.02
USH2AO75445 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
USH2AO75445 UBE2V1P14-201ENST00000415815 558 ntBASIC2.45□□□□□ -2.02
USH2AO75445 AL158073.1-201ENST00000426848 1104 ntBASIC2.45□□□□□ -2.02
USH2AO75445 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms