Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 MAPK10-304ENST00000641341 3984 ntBASIC7.33□□□□□ -1.24
SCN11AQ9UI33 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC7.33□□□□□ -1.24
SCN11AQ9UI33 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC7.33□□□□□ -1.24
SCN11AQ9UI33 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
SCN11AQ9UI33 TANK-205ENST00000405852 2155 ntTSL 5 BASIC7.33□□□□□ -1.24
SCN11AQ9UI33 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
SCN11AQ9UI33 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
SCN11AQ9UI33 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
SCN11AQ9UI33 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC7.33□□□□□ -1.24
SCN11AQ9UI33 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC7.33□□□□□ -1.24
SCN11AQ9UI33 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
SCN11AQ9UI33 KIAA1217-202ENST00000376451 7383 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
SCN11AQ9UI33 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
SCN11AQ9UI33 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC7.33□□□□□ -1.24
SCN11AQ9UI33 SNORA16A-201ENST00000384342 137 ntBASIC7.33□□□□□ -1.24
SCN11AQ9UI33 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC7.33□□□□□ -1.24
SCN11AQ9UI33 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
SCN11AQ9UI33 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC7.33□□□□□ -1.24
SCN11AQ9UI33 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC7.33□□□□□ -1.24
SCN11AQ9UI33 NDUFA5P12-201ENST00000503796 343 ntBASIC7.33□□□□□ -1.24
SCN11AQ9UI33 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC7.33□□□□□ -1.24
SCN11AQ9UI33 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC7.33□□□□□ -1.24
SCN11AQ9UI33 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC7.33□□□□□ -1.24
SCN11AQ9UI33 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC7.33□□□□□ -1.24
SCN11AQ9UI33 CASC22-201ENST00000569713 386 ntTSL 5 BASIC7.33□□□□□ -1.24
SCN11AQ9UI33 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC7.33□□□□□ -1.24
SCN11AQ9UI33 AL445222.1-201ENST00000607259 628 ntBASIC7.33□□□□□ -1.24
SCN11AQ9UI33 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC7.33□□□□□ -1.24
SCN11AQ9UI33 AC009831.5-201ENST00000624000 3189 ntBASIC7.33□□□□□ -1.24
SCN11AQ9UI33 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC7.33□□□□□ -1.24
SCN11AQ9UI33 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SCN11AQ9UI33 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SCN11AQ9UI33 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC7.32□□□□□ -1.24
SCN11AQ9UI33 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC7.32□□□□□ -1.24
SCN11AQ9UI33 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
SCN11AQ9UI33 AC007342.5-201ENST00000571340 2142 ntBASIC7.32□□□□□ -1.24
SCN11AQ9UI33 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SCN11AQ9UI33 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC7.32□□□□□ -1.24
SCN11AQ9UI33 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC7.32□□□□□ -1.24
SCN11AQ9UI33 RNU1-19P-201ENST00000363306 165 ntBASIC7.32□□□□□ -1.24
SCN11AQ9UI33 RNA5SP335-201ENST00000363817 110 ntBASIC7.32□□□□□ -1.24
SCN11AQ9UI33 RMRPP5-201ENST00000411156 267 ntBASIC7.32□□□□□ -1.24
SCN11AQ9UI33 AC007161.1-204ENST00000423039 460 ntBASIC7.32□□□□□ -1.24
SCN11AQ9UI33 HCG14-201ENST00000444986 413 ntTSL 2 BASIC7.32□□□□□ -1.24
SCN11AQ9UI33 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC7.32□□□□□ -1.24
SCN11AQ9UI33 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC7.32□□□□□ -1.24
SCN11AQ9UI33 AC023818.1-201ENST00000498379 384 ntBASIC7.32□□□□□ -1.24
SCN11AQ9UI33 CDC42P3-201ENST00000518493 633 ntBASIC7.32□□□□□ -1.24
SCN11AQ9UI33 AC116651.1-201ENST00000609724 556 ntBASIC7.32□□□□□ -1.24
SCN11AQ9UI33 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC7.32□□□□□ -1.24
SCN11AQ9UI33 AC119674.1-217ENST00000641942 1086 ntBASIC7.32□□□□□ -1.24
SCN11AQ9UI33 GABRQ-201ENST00000598523 6172 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SCN11AQ9UI33 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SCN11AQ9UI33 AP002991.2-201ENST00000623807 2801 ntBASIC7.32□□□□□ -1.24
SCN11AQ9UI33 ZNF207-207ENST00000577908 4672 ntAPPRIS ALT1 TSL 5 BASIC7.32□□□□□ -1.24
SCN11AQ9UI33 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC7.32□□□□□ -1.24
SCN11AQ9UI33 ZNF658B-201ENST00000602828 3408 ntBASIC7.32□□□□□ -1.24
SCN11AQ9UI33 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SCN11AQ9UI33 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC7.32□□□□□ -1.24
SCN11AQ9UI33 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SCN11AQ9UI33 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SCN11AQ9UI33 PAX6-270ENST00000640368 6975 ntAPPRIS P4 TSL 5 BASIC7.31□□□□□ -1.24
SCN11AQ9UI33 AC006206.1-201ENST00000544842 3387 ntBASIC7.31□□□□□ -1.24
SCN11AQ9UI33 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SCN11AQ9UI33 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SCN11AQ9UI33 AP000534.2-201ENST00000412729 568 ntBASIC7.31□□□□□ -1.24
SCN11AQ9UI33 AL606490.1-201ENST00000452266 765 ntBASIC7.31□□□□□ -1.24
SCN11AQ9UI33 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SCN11AQ9UI33 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC7.31□□□□□ -1.24
SCN11AQ9UI33 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC7.31□□□□□ -1.24
SCN11AQ9UI33 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SCN11AQ9UI33 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC7.31□□□□□ -1.24
SCN11AQ9UI33 MRPS21P7-201ENST00000566937 238 ntBASIC7.31□□□□□ -1.24
SCN11AQ9UI33 CDC42EP3P1-201ENST00000601004 764 ntBASIC7.31□□□□□ -1.24
SCN11AQ9UI33 MIR7155-201ENST00000615925 56 ntBASIC7.31□□□□□ -1.24
SCN11AQ9UI33 AL450226.2-201ENST00000622913 439 ntBASIC7.31□□□□□ -1.24
SCN11AQ9UI33 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC7.31□□□□□ -1.24
SCN11AQ9UI33 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
SCN11AQ9UI33 MYOF-201ENST00000358334 6680 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SCN11AQ9UI33 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
SCN11AQ9UI33 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SCN11AQ9UI33 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC7.31□□□□□ -1.24
SCN11AQ9UI33 KDM5A-201ENST00000399788 10763 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SCN11AQ9UI33 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC7.31□□□□□ -1.24
SCN11AQ9UI33 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC7.31□□□□□ -1.24
SCN11AQ9UI33 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC7.31□□□□□ -1.24
SCN11AQ9UI33 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC7.31□□□□□ -1.24
SCN11AQ9UI33 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC7.31□□□□□ -1.24
SCN11AQ9UI33 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SCN11AQ9UI33 MMACHC-201ENST00000401061 5296 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
SCN11AQ9UI33 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC7.31□□□□□ -1.24
SCN11AQ9UI33 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC7.31□□□□□ -1.24
SCN11AQ9UI33 OTX2P1-201ENST00000450956 354 ntBASIC7.31□□□□□ -1.24
SCN11AQ9UI33 RN7SL610P-201ENST00000463845 291 ntBASIC7.31□□□□□ -1.24
SCN11AQ9UI33 RPL7P6-201ENST00000480903 738 ntBASIC7.31□□□□□ -1.24
SCN11AQ9UI33 HIGD1AP14-201ENST00000507617 282 ntBASIC7.31□□□□□ -1.24
SCN11AQ9UI33 AC253576.1-201ENST00000511645 1156 ntBASIC7.31□□□□□ -1.24
SCN11AQ9UI33 OR4A46P-201ENST00000527255 933 ntBASIC7.31□□□□□ -1.24
SCN11AQ9UI33 EIF4A2P5-201ENST00000529914 499 ntBASIC7.31□□□□□ -1.24
SCN11AQ9UI33 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC7.31□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms