Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
PDLIM7Q9NR12 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
PDLIM7Q9NR12 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC7.25□□□□□ -1.25
PDLIM7Q9NR12 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
PDLIM7Q9NR12 CASC19-238ENST00000641523 1558 ntBASIC7.25□□□□□ -1.25
PDLIM7Q9NR12 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
PDLIM7Q9NR12 HSPD1P9-201ENST00000420325 1636 ntBASIC7.24□□□□□ -1.25
PDLIM7Q9NR12 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
PDLIM7Q9NR12 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC7.24□□□□□ -1.25
PDLIM7Q9NR12 CD109-203ENST00000437994 9401 ntAPPRIS ALT1 TSL 1 (best) BASIC7.24□□□□□ -1.25
PDLIM7Q9NR12 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
PDLIM7Q9NR12 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
PDLIM7Q9NR12 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC7.24□□□□□ -1.25
PDLIM7Q9NR12 GAPDHP15-201ENST00000398586 975 ntBASIC7.24□□□□□ -1.25
PDLIM7Q9NR12 AL157702.1-201ENST00000398764 426 ntBASIC7.24□□□□□ -1.25
PDLIM7Q9NR12 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC7.24□□□□□ -1.25
PDLIM7Q9NR12 Z93019.1-201ENST00000416450 973 ntBASIC7.24□□□□□ -1.25
PDLIM7Q9NR12 AC009518.2-201ENST00000418056 731 ntBASIC7.24□□□□□ -1.25
PDLIM7Q9NR12 USP9YP21-201ENST00000420603 432 ntBASIC7.24□□□□□ -1.25
PDLIM7Q9NR12 RPL23AP85-201ENST00000421838 433 ntBASIC7.24□□□□□ -1.25
PDLIM7Q9NR12 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC7.24□□□□□ -1.25
PDLIM7Q9NR12 AC010099.3-201ENST00000423896 409 ntBASIC7.24□□□□□ -1.25
PDLIM7Q9NR12 VN1R21P-201ENST00000426703 765 ntBASIC7.24□□□□□ -1.25
PDLIM7Q9NR12 MTND6P12-201ENST00000428247 522 ntBASIC7.24□□□□□ -1.25
PDLIM7Q9NR12 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC7.24□□□□□ -1.25
PDLIM7Q9NR12 MTND1P34-201ENST00000438556 671 ntBASIC7.24□□□□□ -1.25
PDLIM7Q9NR12 THAP5P1-201ENST00000439089 262 ntBASIC7.24□□□□□ -1.25
PDLIM7Q9NR12 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC7.24□□□□□ -1.25
PDLIM7Q9NR12 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC7.24□□□□□ -1.25
PDLIM7Q9NR12 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC7.24□□□□□ -1.25
PDLIM7Q9NR12 MTCO3P35-201ENST00000485582 781 ntBASIC7.24□□□□□ -1.25
PDLIM7Q9NR12 RPL12P30-201ENST00000488389 499 ntBASIC7.24□□□□□ -1.25
PDLIM7Q9NR12 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC7.24□□□□□ -1.25
PDLIM7Q9NR12 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC7.24□□□□□ -1.25
PDLIM7Q9NR12 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC7.24□□□□□ -1.25
PDLIM7Q9NR12 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC7.24□□□□□ -1.25
PDLIM7Q9NR12 RNA5SP206-201ENST00000516703 121 ntBASIC7.24□□□□□ -1.25
PDLIM7Q9NR12 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
PDLIM7Q9NR12 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC7.24□□□□□ -1.25
PDLIM7Q9NR12 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC7.24□□□□□ -1.25
PDLIM7Q9NR12 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC7.24□□□□□ -1.25
PDLIM7Q9NR12 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC7.24□□□□□ -1.25
PDLIM7Q9NR12 MTCYBP23-201ENST00000558717 1102 ntBASIC7.24□□□□□ -1.25
PDLIM7Q9NR12 BUB1P1-201ENST00000603541 607 ntBASIC7.24□□□□□ -1.25
PDLIM7Q9NR12 PAIP2B-201ENST00000244221 6279 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
PDLIM7Q9NR12 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
PDLIM7Q9NR12 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC7.24□□□□□ -1.25
PDLIM7Q9NR12 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
PDLIM7Q9NR12 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC7.24□□□□□ -1.25
PDLIM7Q9NR12 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
PDLIM7Q9NR12 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC7.24□□□□□ -1.25
PDLIM7Q9NR12 MGAT4A-201ENST00000264968 8432 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
PDLIM7Q9NR12 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
PDLIM7Q9NR12 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
PDLIM7Q9NR12 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC7.24□□□□□ -1.25
PDLIM7Q9NR12 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC7.24□□□□□ -1.25
PDLIM7Q9NR12 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC7.24□□□□□ -1.25
PDLIM7Q9NR12 AC110597.1-201ENST00000562669 3176 ntBASIC7.24□□□□□ -1.25
PDLIM7Q9NR12 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
PDLIM7Q9NR12 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC7.23□□□□□ -1.25
PDLIM7Q9NR12 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC7.23□□□□□ -1.25
PDLIM7Q9NR12 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
PDLIM7Q9NR12 AC127070.3-201ENST00000503695 3263 ntBASIC7.23□□□□□ -1.25
PDLIM7Q9NR12 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
PDLIM7Q9NR12 CASC19-255ENST00000641733 1385 ntBASIC7.23□□□□□ -1.25
PDLIM7Q9NR12 AC062022.1-201ENST00000451026 1684 ntBASIC7.23□□□□□ -1.25
PDLIM7Q9NR12 CASC19-228ENST00000641414 1684 ntBASIC7.23□□□□□ -1.25
PDLIM7Q9NR12 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC7.23□□□□□ -1.25
PDLIM7Q9NR12 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
PDLIM7Q9NR12 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
PDLIM7Q9NR12 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
PDLIM7Q9NR12 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
PDLIM7Q9NR12 MRAP-202ENST00000339944 440 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
PDLIM7Q9NR12 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
PDLIM7Q9NR12 RNU6-298P-201ENST00000390888 96 ntBASIC7.23□□□□□ -1.25
PDLIM7Q9NR12 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
PDLIM7Q9NR12 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC7.23□□□□□ -1.25
PDLIM7Q9NR12 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC7.23□□□□□ -1.25
PDLIM7Q9NR12 CDY8P-201ENST00000428380 1279 ntBASIC7.23□□□□□ -1.25
PDLIM7Q9NR12 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
PDLIM7Q9NR12 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC7.23□□□□□ -1.25
PDLIM7Q9NR12 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
PDLIM7Q9NR12 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC7.23□□□□□ -1.25
PDLIM7Q9NR12 CDY20P-201ENST00000447528 1279 ntBASIC7.23□□□□□ -1.25
PDLIM7Q9NR12 RPL31P15-201ENST00000449770 338 ntBASIC7.23□□□□□ -1.25
PDLIM7Q9NR12 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC7.23□□□□□ -1.25
PDLIM7Q9NR12 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC7.23□□□□□ -1.25
PDLIM7Q9NR12 AC007998.1-201ENST00000474156 672 ntBASIC7.23□□□□□ -1.25
PDLIM7Q9NR12 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC7.23□□□□□ -1.25
PDLIM7Q9NR12 RN7SL205P-201ENST00000490174 284 ntBASIC7.23□□□□□ -1.25
PDLIM7Q9NR12 PPM1AP1-201ENST00000502740 1135 ntBASIC7.23□□□□□ -1.25
PDLIM7Q9NR12 PSMA2P2-201ENST00000504319 686 ntBASIC7.23□□□□□ -1.25
PDLIM7Q9NR12 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC7.23□□□□□ -1.25
PDLIM7Q9NR12 AC131392.1-201ENST00000506490 633 ntBASIC7.23□□□□□ -1.25
PDLIM7Q9NR12 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC7.23□□□□□ -1.25
PDLIM7Q9NR12 RNU6-889P-201ENST00000517189 103 ntBASIC7.23□□□□□ -1.25
PDLIM7Q9NR12 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC7.23□□□□□ -1.25
PDLIM7Q9NR12 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC7.23□□□□□ -1.25
PDLIM7Q9NR12 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
PDLIM7Q9NR12 OR4A42P-201ENST00000531397 938 ntBASIC7.23□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms