Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC7.71□□□□□ -1.18
USB1Q9BQ65 FCAR-207ENST00000391725 830 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
USB1Q9BQ65 AL390316.1-201ENST00000406279 553 ntBASIC7.71□□□□□ -1.18
USB1Q9BQ65 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
USB1Q9BQ65 RN7SKP251-201ENST00000410830 314 ntBASIC7.71□□□□□ -1.18
USB1Q9BQ65 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC7.71□□□□□ -1.18
USB1Q9BQ65 RBM22P7-201ENST00000421321 280 ntBASIC7.71□□□□□ -1.18
USB1Q9BQ65 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC7.71□□□□□ -1.18
USB1Q9BQ65 OR51AB1P-201ENST00000429046 620 ntBASIC7.71□□□□□ -1.18
USB1Q9BQ65 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
USB1Q9BQ65 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC7.71□□□□□ -1.18
USB1Q9BQ65 AC002504.1-201ENST00000438281 691 ntBASIC7.71□□□□□ -1.18
USB1Q9BQ65 ASS1P4-201ENST00000439462 1234 ntBASIC7.71□□□□□ -1.18
USB1Q9BQ65 TISP43-205ENST00000440359 543 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
USB1Q9BQ65 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
USB1Q9BQ65 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC7.71□□□□□ -1.18
USB1Q9BQ65 AL672138.1-201ENST00000450604 1015 ntBASIC7.71□□□□□ -1.18
USB1Q9BQ65 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
USB1Q9BQ65 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC7.71□□□□□ -1.18
USB1Q9BQ65 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC7.71□□□□□ -1.18
USB1Q9BQ65 RPS3AP50-201ENST00000487064 803 ntBASIC7.71□□□□□ -1.18
USB1Q9BQ65 AC006387.1-203ENST00000494849 342 ntTSL 3 BASIC7.71□□□□□ -1.18
USB1Q9BQ65 AC093325.1-201ENST00000508378 326 ntBASIC7.71□□□□□ -1.18
USB1Q9BQ65 MICE-207ENST00000510438 1157 ntBASIC7.71□□□□□ -1.18
USB1Q9BQ65 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC7.71□□□□□ -1.18
USB1Q9BQ65 BTF3P12-201ENST00000519620 469 ntBASIC7.71□□□□□ -1.18
USB1Q9BQ65 AC138832.1-201ENST00000522871 556 ntBASIC7.71□□□□□ -1.18
USB1Q9BQ65 AP000757.1-202ENST00000525260 891 ntTSL 3 BASIC7.71□□□□□ -1.18
USB1Q9BQ65 COX6CP5-201ENST00000527162 228 ntBASIC7.71□□□□□ -1.18
USB1Q9BQ65 AC027026.1-201ENST00000532323 742 ntBASIC7.71□□□□□ -1.18
USB1Q9BQ65 SLC5A4P1-201ENST00000532944 612 ntBASIC7.71□□□□□ -1.18
USB1Q9BQ65 AC089998.3-201ENST00000549715 493 ntBASIC7.71□□□□□ -1.18
USB1Q9BQ65 AC068714.1-201ENST00000559623 800 ntBASIC7.71□□□□□ -1.18
USB1Q9BQ65 HYKK-203ENST00000563233 734 ntTSL 2 BASIC7.71□□□□□ -1.18
USB1Q9BQ65 RPL17-212ENST00000581373 584 ntTSL 2 BASIC7.71□□□□□ -1.18
USB1Q9BQ65 AP001180.3-201ENST00000582221 145 ntBASIC7.71□□□□□ -1.18
USB1Q9BQ65 AC026458.2-201ENST00000589323 531 ntTSL 5 BASIC7.71□□□□□ -1.18
USB1Q9BQ65 LAMTOR5-AS1-207ENST00000590826 574 ntTSL 4 BASIC7.71□□□□□ -1.18
USB1Q9BQ65 TPMTP1-201ENST00000592307 737 ntBASIC7.71□□□□□ -1.18
USB1Q9BQ65 AC010320.1-201ENST00000599775 578 ntTSL 3 BASIC7.71□□□□□ -1.18
USB1Q9BQ65 AC026150.3-201ENST00000602595 499 ntBASIC7.71□□□□□ -1.18
USB1Q9BQ65 XIAPP1-201ENST00000603162 600 ntBASIC7.71□□□□□ -1.18
USB1Q9BQ65 AL133338.2-201ENST00000604292 736 ntBASIC7.71□□□□□ -1.18
USB1Q9BQ65 AC093458.1-201ENST00000608912 222 ntBASIC7.71□□□□□ -1.18
USB1Q9BQ65 MGST2-207ENST00000616265 1278 ntAPPRIS P1 TSL 4 BASIC7.71□□□□□ -1.18
USB1Q9BQ65 AC073107.2-201ENST00000620476 238 ntBASIC7.71□□□□□ -1.18
USB1Q9BQ65 AC093909.6-201ENST00000624757 775 ntBASIC7.71□□□□□ -1.18
USB1Q9BQ65 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC7.71□□□□□ -1.18
USB1Q9BQ65 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC7.71□□□□□ -1.18
USB1Q9BQ65 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
USB1Q9BQ65 AL596275.2-203ENST00000641951 371 ntBASIC7.71□□□□□ -1.18
USB1Q9BQ65 CLCN3P1-202ENST00000609203 1944 ntTSL 2 BASIC7.71□□□□□ -1.18
USB1Q9BQ65 CD180-201ENST00000256447 5388 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
USB1Q9BQ65 CCT5-213ENST00000515390 1728 ntTSL 2 BASIC7.71□□□□□ -1.18
USB1Q9BQ65 SLC26A9-202ENST00000367134 4616 ntTSL 5 BASIC7.71□□□□□ -1.18
USB1Q9BQ65 NGDN-201ENST00000397154 2204 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.18
USB1Q9BQ65 NLK-201ENST00000407008 4047 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
USB1Q9BQ65 PRICKLE2-201ENST00000295902 7918 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
USB1Q9BQ65 WISP3-202ENST00000361714 2512 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
USB1Q9BQ65 PTBP3-203ENST00000343327 2755 ntTSL 2 BASIC7.71□□□□□ -1.18
USB1Q9BQ65 PIGN-230ENST00000638977 4601 ntTSL 5 BASIC7.71□□□□□ -1.18
USB1Q9BQ65 NPFFR2-204ENST00000395999 1866 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
USB1Q9BQ65 PRCP-202ENST00000393399 2120 ntTSL 2 BASIC7.7□□□□□ -1.18
USB1Q9BQ65 NLRP3-206ENST00000391828 3853 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
USB1Q9BQ65 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
USB1Q9BQ65 AC092329.4-202ENST00000638174 1989 ntTSL 2 BASIC7.7□□□□□ -1.18
USB1Q9BQ65 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC7.7□□□□□ -1.18
USB1Q9BQ65 LINC01182-202ENST00000510907 2228 ntTSL 2 BASIC7.7□□□□□ -1.18
USB1Q9BQ65 ZC3H6-202ENST00000409871 11542 ntAPPRIS P1 TSL 2 BASIC7.7□□□□□ -1.18
USB1Q9BQ65 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
USB1Q9BQ65 XIRP2-202ENST00000409043 3292 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
USB1Q9BQ65 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC7.7□□□□□ -1.18
USB1Q9BQ65 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC7.7□□□□□ -1.18
USB1Q9BQ65 MR1-208ENST00000614012 7860 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
USB1Q9BQ65 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC7.7□□□□□ -1.18
USB1Q9BQ65 LIPG-201ENST00000261292 10441 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
USB1Q9BQ65 AC131392.2-201ENST00000505635 4332 ntBASIC7.7□□□□□ -1.18
USB1Q9BQ65 CCL13-201ENST00000225844 851 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
USB1Q9BQ65 OR2T6-201ENST00000355728 927 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
USB1Q9BQ65 OR10A3-201ENST00000360759 1061 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
USB1Q9BQ65 SNORD3G-201ENST00000362796 215 ntBASIC7.7□□□□□ -1.18
USB1Q9BQ65 RNA5SP105-201ENST00000391123 113 ntBASIC7.7□□□□□ -1.18
USB1Q9BQ65 NUPR1-202ENST00000395641 550 ntTSL 2 BASIC7.7□□□□□ -1.18
USB1Q9BQ65 RPL32P23-201ENST00000397237 405 ntBASIC7.7□□□□□ -1.18
USB1Q9BQ65 SYNE1-AS1-201ENST00000412161 553 ntTSL 2 BASIC7.7□□□□□ -1.18
USB1Q9BQ65 MTCO2P27-201ENST00000420740 428 ntBASIC7.7□□□□□ -1.18
USB1Q9BQ65 AC007394.1-201ENST00000421941 531 ntBASIC7.7□□□□□ -1.18
USB1Q9BQ65 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC7.7□□□□□ -1.18
USB1Q9BQ65 DAB1-AS1-203ENST00000432897 656 ntTSL 5 BASIC7.7□□□□□ -1.18
USB1Q9BQ65 LSM1P1-201ENST00000438629 273 ntBASIC7.7□□□□□ -1.18
USB1Q9BQ65 LINC00894-207ENST00000452864 750 ntTSL 5 BASIC7.7□□□□□ -1.18
USB1Q9BQ65 NDUFA5P7-201ENST00000452914 242 ntBASIC7.7□□□□□ -1.18
USB1Q9BQ65 RNU6-261P-201ENST00000459506 102 ntBASIC7.7□□□□□ -1.18
USB1Q9BQ65 MRPS17P3-201ENST00000465453 385 ntBASIC7.7□□□□□ -1.18
USB1Q9BQ65 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC7.7□□□□□ -1.18
USB1Q9BQ65 RPL7P39-201ENST00000481157 744 ntBASIC7.7□□□□□ -1.18
USB1Q9BQ65 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
USB1Q9BQ65 SUMO2P17-201ENST00000504438 285 ntBASIC7.7□□□□□ -1.18
USB1Q9BQ65 CFL1P5-201ENST00000508046 502 ntBASIC7.7□□□□□ -1.18
USB1Q9BQ65 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms