Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC7.73□□□□□ -1.17
SYNGAP1Q96PV0 AL034417.4-202ENST00000642135 2236 ntBASIC7.73□□□□□ -1.17
SYNGAP1Q96PV0 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
SYNGAP1Q96PV0 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC7.72□□□□□ -1.17
SYNGAP1Q96PV0 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
SYNGAP1Q96PV0 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC7.72□□□□□ -1.17
SYNGAP1Q96PV0 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC7.72□□□□□ -1.17
SYNGAP1Q96PV0 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
SYNGAP1Q96PV0 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
SYNGAP1Q96PV0 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC7.72□□□□□ -1.17
SYNGAP1Q96PV0 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
SYNGAP1Q96PV0 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
SYNGAP1Q96PV0 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
SYNGAP1Q96PV0 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
SYNGAP1Q96PV0 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC7.72□□□□□ -1.17
SYNGAP1Q96PV0 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
SYNGAP1Q96PV0 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
SYNGAP1Q96PV0 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
SYNGAP1Q96PV0 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
SYNGAP1Q96PV0 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC7.72□□□□□ -1.17
SYNGAP1Q96PV0 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC7.72□□□□□ -1.17
SYNGAP1Q96PV0 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
SYNGAP1Q96PV0 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
SYNGAP1Q96PV0 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC7.72□□□□□ -1.17
SYNGAP1Q96PV0 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC7.72□□□□□ -1.17
SYNGAP1Q96PV0 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
SYNGAP1Q96PV0 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC7.72□□□□□ -1.17
SYNGAP1Q96PV0 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC7.72□□□□□ -1.17
SYNGAP1Q96PV0 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
SYNGAP1Q96PV0 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
SYNGAP1Q96PV0 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC7.72□□□□□ -1.17
SYNGAP1Q96PV0 RNA5SP321-201ENST00000362722 111 ntBASIC7.72□□□□□ -1.17
SYNGAP1Q96PV0 RNU6-481P-201ENST00000384194 107 ntBASIC7.72□□□□□ -1.17
SYNGAP1Q96PV0 AC008171.1-201ENST00000395058 200 ntBASIC7.72□□□□□ -1.17
SYNGAP1Q96PV0 AC068138.1-201ENST00000412635 217 ntBASIC7.72□□□□□ -1.17
SYNGAP1Q96PV0 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC7.72□□□□□ -1.17
SYNGAP1Q96PV0 MTND1P4-201ENST00000435196 415 ntBASIC7.72□□□□□ -1.17
SYNGAP1Q96PV0 AC092106.2-201ENST00000436597 487 ntBASIC7.72□□□□□ -1.17
SYNGAP1Q96PV0 AC073052.1-201ENST00000440417 714 ntBASIC7.72□□□□□ -1.17
SYNGAP1Q96PV0 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC7.72□□□□□ -1.17
SYNGAP1Q96PV0 AC135721.2-201ENST00000464237 300 ntBASIC7.72□□□□□ -1.17
SYNGAP1Q96PV0 CBX1P5-201ENST00000475330 559 ntBASIC7.72□□□□□ -1.17
SYNGAP1Q96PV0 RN7SL413P-201ENST00000482700 297 ntBASIC7.72□□□□□ -1.17
SYNGAP1Q96PV0 RPL7P51-201ENST00000490532 749 ntBASIC7.72□□□□□ -1.17
SYNGAP1Q96PV0 PABPC1P1-201ENST00000506347 591 ntBASIC7.72□□□□□ -1.17
SYNGAP1Q96PV0 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC7.72□□□□□ -1.17
SYNGAP1Q96PV0 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC7.72□□□□□ -1.17
SYNGAP1Q96PV0 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC7.72□□□□□ -1.17
SYNGAP1Q96PV0 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC7.72□□□□□ -1.17
SYNGAP1Q96PV0 AC079064.1-201ENST00000528365 362 ntBASIC7.72□□□□□ -1.17
SYNGAP1Q96PV0 OR4A21P-201ENST00000532759 944 ntBASIC7.72□□□□□ -1.17
SYNGAP1Q96PV0 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC7.72□□□□□ -1.17
SYNGAP1Q96PV0 OLR1-209ENST00000543993 822 ntTSL 2 BASIC7.72□□□□□ -1.17
SYNGAP1Q96PV0 AC023050.2-201ENST00000544968 387 ntBASIC7.72□□□□□ -1.17
SYNGAP1Q96PV0 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC7.72□□□□□ -1.17
SYNGAP1Q96PV0 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC7.72□□□□□ -1.17
SYNGAP1Q96PV0 AGGF1P8-201ENST00000562979 1000 ntBASIC7.72□□□□□ -1.17
SYNGAP1Q96PV0 MIR4801-201ENST00000582704 82 ntBASIC7.72□□□□□ -1.17
SYNGAP1Q96PV0 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC7.72□□□□□ -1.17
SYNGAP1Q96PV0 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC7.72□□□□□ -1.17
SYNGAP1Q96PV0 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC7.72□□□□□ -1.17
SYNGAP1Q96PV0 AC004987.4-201ENST00000603383 338 ntBASIC7.72□□□□□ -1.17
SYNGAP1Q96PV0 AC079610.2-201ENST00000604818 690 ntBASIC7.72□□□□□ -1.17
SYNGAP1Q96PV0 AC096586.2-201ENST00000610260 441 ntBASIC7.72□□□□□ -1.17
SYNGAP1Q96PV0 AC104073.3-201ENST00000610942 955 ntBASIC7.72□□□□□ -1.17
SYNGAP1Q96PV0 AL355073.2-201ENST00000612106 557 ntBASIC7.72□□□□□ -1.17
SYNGAP1Q96PV0 MIR7854-201ENST00000620068 65 ntBASIC7.72□□□□□ -1.17
SYNGAP1Q96PV0 AC025262.3-201ENST00000623666 360 ntBASIC7.72□□□□□ -1.17
SYNGAP1Q96PV0 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC7.72□□□□□ -1.17
SYNGAP1Q96PV0 PFKM-232ENST00000629846 381 ntTSL 4 BASIC7.72□□□□□ -1.17
SYNGAP1Q96PV0 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC7.72□□□□□ -1.17
SYNGAP1Q96PV0 AC007671.2-201ENST00000637344 619 ntBASIC7.72□□□□□ -1.17
SYNGAP1Q96PV0 AL354702.2-202ENST00000641481 890 ntBASIC7.72□□□□□ -1.17
SYNGAP1Q96PV0 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC7.72□□□□□ -1.17
SYNGAP1Q96PV0 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
SYNGAP1Q96PV0 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
SYNGAP1Q96PV0 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC7.71□□□□□ -1.17
SYNGAP1Q96PV0 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
SYNGAP1Q96PV0 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC7.71□□□□□ -1.17
SYNGAP1Q96PV0 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC7.71□□□□□ -1.17
SYNGAP1Q96PV0 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC7.71□□□□□ -1.17
SYNGAP1Q96PV0 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC7.71□□□□□ -1.17
SYNGAP1Q96PV0 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
SYNGAP1Q96PV0 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
SYNGAP1Q96PV0 ADGRA3-209ENST00000508133 1572 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
SYNGAP1Q96PV0 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.17
SYNGAP1Q96PV0 AL136981.1-203ENST00000451452 3844 ntBASIC7.71□□□□□ -1.18
SYNGAP1Q96PV0 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC7.71□□□□□ -1.18
SYNGAP1Q96PV0 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
SYNGAP1Q96PV0 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.18
SYNGAP1Q96PV0 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
SYNGAP1Q96PV0 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
SYNGAP1Q96PV0 MTHFD2P5-201ENST00000320415 844 ntBASIC7.71□□□□□ -1.18
SYNGAP1Q96PV0 AL353625.1-202ENST00000366273 571 ntBASIC7.71□□□□□ -1.18
SYNGAP1Q96PV0 RN7SKP129-201ENST00000410288 299 ntBASIC7.71□□□□□ -1.18
SYNGAP1Q96PV0 RNU4-72P-201ENST00000410754 173 ntBASIC7.71□□□□□ -1.18
SYNGAP1Q96PV0 AL356320.2-201ENST00000417263 507 ntBASIC7.71□□□□□ -1.18
SYNGAP1Q96PV0 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC7.71□□□□□ -1.18
SYNGAP1Q96PV0 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
SYNGAP1Q96PV0 MRPS21P5-201ENST00000417885 231 ntBASIC7.71□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms