Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
SMC1BQ8NDV3 MIR4505-201ENST00000582238 73 ntBASIC7.54□□□□□ -1.2
SMC1BQ8NDV3 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC7.54□□□□□ -1.2
SMC1BQ8NDV3 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC7.54□□□□□ -1.2
SMC1BQ8NDV3 AL136228.1-201ENST00000622221 319 ntBASIC7.54□□□□□ -1.2
SMC1BQ8NDV3 MIR6810-201ENST00000622701 70 ntBASIC7.54□□□□□ -1.2
SMC1BQ8NDV3 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
SMC1BQ8NDV3 CYP2C18-201ENST00000285979 2418 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
SMC1BQ8NDV3 TMC5-208ENST00000564959 2434 ntTSL 2 BASIC7.54□□□□□ -1.2
SMC1BQ8NDV3 MAPK10-323ENST00000641493 3207 ntBASIC7.54□□□□□ -1.2
SMC1BQ8NDV3 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
SMC1BQ8NDV3 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC7.54□□□□□ -1.2
SMC1BQ8NDV3 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
SMC1BQ8NDV3 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC7.54□□□□□ -1.2
SMC1BQ8NDV3 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC7.54□□□□□ -1.2
SMC1BQ8NDV3 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
SMC1BQ8NDV3 MROH3P-201ENST00000435735 2676 ntBASIC7.54□□□□□ -1.2
SMC1BQ8NDV3 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
SMC1BQ8NDV3 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC7.54□□□□□ -1.2
SMC1BQ8NDV3 MAPK10-270ENST00000641102 3538 ntBASIC7.53□□□□□ -1.2
SMC1BQ8NDV3 RAI14-208ENST00000506376 3091 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
SMC1BQ8NDV3 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
SMC1BQ8NDV3 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
SMC1BQ8NDV3 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC7.53□□□□□ -1.2
SMC1BQ8NDV3 YES1-203ENST00000577961 4554 ntTSL 5 BASIC7.53□□□□□ -1.2
SMC1BQ8NDV3 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC7.53□□□□□ -1.2
SMC1BQ8NDV3 AL513548.1-201ENST00000562904 1724 ntBASIC7.53□□□□□ -1.2
SMC1BQ8NDV3 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC7.53□□□□□ -1.2
SMC1BQ8NDV3 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC7.53□□□□□ -1.2
SMC1BQ8NDV3 AC092821.3-202ENST00000641304 2767 ntBASIC7.53□□□□□ -1.2
SMC1BQ8NDV3 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
SMC1BQ8NDV3 RPL9P21-201ENST00000392269 505 ntBASIC7.53□□□□□ -1.2
SMC1BQ8NDV3 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC7.53□□□□□ -1.2
SMC1BQ8NDV3 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC7.53□□□□□ -1.2
SMC1BQ8NDV3 RCC2P2-201ENST00000422174 918 ntBASIC7.53□□□□□ -1.2
SMC1BQ8NDV3 GSTA6P-201ENST00000424144 582 ntBASIC7.53□□□□□ -1.2
SMC1BQ8NDV3 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC7.53□□□□□ -1.2
SMC1BQ8NDV3 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC7.53□□□□□ -1.2
SMC1BQ8NDV3 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC7.53□□□□□ -1.2
SMC1BQ8NDV3 AL772161.1-201ENST00000439130 476 ntBASIC7.53□□□□□ -1.2
SMC1BQ8NDV3 CRYGGP-201ENST00000443337 145 ntBASIC7.53□□□□□ -1.2
SMC1BQ8NDV3 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC7.53□□□□□ -1.2
SMC1BQ8NDV3 AL606490.1-201ENST00000452266 765 ntBASIC7.53□□□□□ -1.2
SMC1BQ8NDV3 AL050331.2-201ENST00000457319 421 ntTSL 3 BASIC7.53□□□□□ -1.2
SMC1BQ8NDV3 AC092902.1-201ENST00000486999 259 ntBASIC7.53□□□□□ -1.2
SMC1BQ8NDV3 RN7SL714P-201ENST00000487050 298 ntBASIC7.53□□□□□ -1.2
SMC1BQ8NDV3 AC096754.1-201ENST00000508904 818 ntBASIC7.53□□□□□ -1.2
SMC1BQ8NDV3 RNA5SP228-201ENST00000516232 133 ntBASIC7.53□□□□□ -1.2
SMC1BQ8NDV3 RNA5SP92-201ENST00000516437 110 ntBASIC7.53□□□□□ -1.2
SMC1BQ8NDV3 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC7.53□□□□□ -1.2
SMC1BQ8NDV3 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SMC1BQ8NDV3 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SMC1BQ8NDV3 AC074276.2-201ENST00000619891 348 ntBASIC7.53□□□□□ -1.2
SMC1BQ8NDV3 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
SMC1BQ8NDV3 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SMC1BQ8NDV3 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC7.53□□□□□ -1.2
SMC1BQ8NDV3 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC7.53□□□□□ -1.2
SMC1BQ8NDV3 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC7.53□□□□□ -1.2
SMC1BQ8NDV3 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SMC1BQ8NDV3 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC7.53□□□□□ -1.2
SMC1BQ8NDV3 LINC01697-202ENST00000426534 1764 ntTSL 2 BASIC7.53□□□□□ -1.2
SMC1BQ8NDV3 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SMC1BQ8NDV3 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC7.53□□□□□ -1.2
SMC1BQ8NDV3 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SMC1BQ8NDV3 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
SMC1BQ8NDV3 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.2
SMC1BQ8NDV3 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
SMC1BQ8NDV3 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
SMC1BQ8NDV3 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.2
SMC1BQ8NDV3 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
SMC1BQ8NDV3 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
SMC1BQ8NDV3 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC7.52□□□□□ -1.21
SMC1BQ8NDV3 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC7.52□□□□□ -1.21
SMC1BQ8NDV3 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
SMC1BQ8NDV3 AC096992.2-201ENST00000609553 1684 ntBASIC7.52□□□□□ -1.21
SMC1BQ8NDV3 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
SMC1BQ8NDV3 EEF1A1P14-201ENST00000421195 1376 ntBASIC7.52□□□□□ -1.21
SMC1BQ8NDV3 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
SMC1BQ8NDV3 RNA5SP65-201ENST00000363166 119 ntBASIC7.52□□□□□ -1.21
SMC1BQ8NDV3 AL132875.1-201ENST00000403623 949 ntBASIC7.52□□□□□ -1.21
SMC1BQ8NDV3 GLS-203ENST00000409215 632 ntTSL 4 BASIC7.52□□□□□ -1.21
SMC1BQ8NDV3 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC7.52□□□□□ -1.21
SMC1BQ8NDV3 MTND4P11-201ENST00000417020 1058 ntBASIC7.52□□□□□ -1.21
SMC1BQ8NDV3 RPL36P18-201ENST00000419316 318 ntBASIC7.52□□□□□ -1.21
SMC1BQ8NDV3 RPL23AP85-201ENST00000421838 433 ntBASIC7.52□□□□□ -1.21
SMC1BQ8NDV3 MTCYBP32-201ENST00000427945 1084 ntBASIC7.52□□□□□ -1.21
SMC1BQ8NDV3 OR3D1P-201ENST00000438288 955 ntBASIC7.52□□□□□ -1.21
SMC1BQ8NDV3 RPL12P3-201ENST00000440080 396 ntBASIC7.52□□□□□ -1.21
SMC1BQ8NDV3 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC7.52□□□□□ -1.21
SMC1BQ8NDV3 AC092865.4-201ENST00000477936 615 ntBASIC7.52□□□□□ -1.21
SMC1BQ8NDV3 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC7.52□□□□□ -1.21
SMC1BQ8NDV3 AC108157.1-201ENST00000510511 539 ntBASIC7.52□□□□□ -1.21
SMC1BQ8NDV3 AC090958.1-201ENST00000511122 351 ntBASIC7.52□□□□□ -1.21
SMC1BQ8NDV3 GAPDHP71-201ENST00000511530 1003 ntBASIC7.52□□□□□ -1.21
SMC1BQ8NDV3 AC074087.1-201ENST00000512059 724 ntBASIC7.52□□□□□ -1.21
SMC1BQ8NDV3 NPM1P52-201ENST00000518264 846 ntBASIC7.52□□□□□ -1.21
SMC1BQ8NDV3 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC7.52□□□□□ -1.21
SMC1BQ8NDV3 AC138701.1-201ENST00000524329 714 ntBASIC7.52□□□□□ -1.21
SMC1BQ8NDV3 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC7.52□□□□□ -1.21
SMC1BQ8NDV3 AC074029.2-201ENST00000551045 634 ntBASIC7.52□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms